RNA–Protein interactions for RNA: ENST00000429553.5

SH2D3C-206, Transcript of SH2 domain containing 3C, humanhuman

TSL 1 (best) BASIC

Gene SH2D3C, Length 2,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-206ENST00000429553 C15orf41Q9Y2V0 281 aa16.81■□□□□ 0.28
SH2D3C-206ENST00000429553 LRRC10BA6NIK2 292 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 BTBD11A6QL63 1104 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 KCNJ18B7U540 433 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 RANBP6O60518 1105 aaKnown RBP16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 HOXB7P09629 217 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 TIMM10P62072 90 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 KRT83P78385 493 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 KCNJ12Q14500 433 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 C8orf74Q6P047 294 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 MAATS1Q7Z4T9 603 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 RALYLQ86SE5 291 aaKnown RBP16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 PAGE5Q96GU1 130 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 ZNF570Q96NI8 536 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 RBM12Q9NTZ6 932 aaKnown RBP16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 ALS2Q96Q42 1657 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 MYH10P35580 1976 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 SMNDC1O75940 238 aaKnown RBP eCLIP16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 CLTAP09496 248 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 RAB27AP51159 221 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 TRIM14Q14142 442 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 IMMTQ16891 758 aaKnown RBP16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 NBPF9Q3BBW0 867 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 TCP11X2Q5H9J9 407 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 KANK3Q6NY19 840 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 LMOD2Q6P5Q4 547 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 PNMA8AQ86V59 439 aaPredicted RBP16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 COPRSQ9NQ92 184 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 VPS54Q9P1Q0 977 aa16.8■□□□□ 0.28
SH2D3C-206ENST00000429553 SH2B2O14492 632 aaPredicted RBP16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 MYBL1P10243 752 aa16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 RFX5P48382 616 aaPredicted RBP16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 PSMD2Q13200 908 aa16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 PPP4R3AQ6IN85 833 aa16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 KRT26Q7Z3Y9 468 aa16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 MLXIPQ9HAP2 919 aa16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 EPB41L5Q9HCM4 733 aa16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 BSDC1Q9NW68 430 aaPredicted RBP16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 NCK2O43639 380 aa16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 GCP02774 474 aa16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 CACNA2D3Q8IZS8 1091 aa16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 C3orf20Q8ND61 904 aa16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 OR2W6PQ8NHA6 318 aa16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 DNAJC7Q99615 494 aa16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 BLZF1Q9H2G9 400 aa16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 AGPAT5Q9NUQ2 364 aa16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 UBN2Q6ZU65 1347 aa16.79■□□□□ 0.28
SH2D3C-206ENST00000429553 PHF20L1A8MW92 1017 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 RNF113AO15541 343 aaKnown RBP16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 TRAPPC3O43617 180 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 IARSP41252 1262 aaKnown RBP16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 GLE1Q53GS7 698 aaKnown RBP16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 RRAGBQ5VZM2 374 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 FNBP4Q8N3X1 1017 aaPredicted RBP16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 NCOA7Q8NI08 942 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 CNKSR2Q8WXI2 1034 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 CCT6BQ92526 530 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 MS4A14Q96JA4 679 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 OSBPL9Q96SU4 736 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 LRWD1Q9UFC0 647 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 MRC1P22897 1456 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 RGPD2P0DJD1 1756 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 GUCY1A2P33402 732 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 GUCY2DQ02846 1103 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 NR5A1Q13285 461 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 TSR1Q2NL82 804 aaKnown RBP16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 LACTB2Q53H82 288 aaPredicted RBP16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 CHADLQ6NUI6 762 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 DDX17Q92841 729 aaKnown RBP16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 SLC26A6Q9BXS9 759 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 NHEJ1Q9H9Q4 299 aaPredicted RBP16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 MAP3K15Q6ZN16 1313 aa16.78■□□□□ 0.28
SH2D3C-206ENST00000429553 HMGB1P1B2RPK0 211 aaPredicted RBP16.77■□□□□ 0.28
SH2D3C-206ENST00000429553 MOCS3O95396 460 aa16.77■□□□□ 0.28
SH2D3C-206ENST00000429553 TRAF1Q13077 416 aa16.77■□□□□ 0.28
SH2D3C-206ENST00000429553 GPIHBP1Q8IV16 184 aa16.77■□□□□ 0.28
SH2D3C-206ENST00000429553 DIS3L2Q8IYB7 885 aaKnown RBP16.77■□□□□ 0.28
SH2D3C-206ENST00000429553 ACSBG1Q96GR2 724 aa16.77■□□□□ 0.28
SH2D3C-206ENST00000429553 PLAAQ9Y263 795 aa16.77■□□□□ 0.28
SH2D3C-206ENST00000429553 ZPR1O75312 459 aa16.77■□□□□ 0.28
SH2D3C-206ENST00000429553 DNAJC8O75937 253 aaPredicted RBP16.77■□□□□ 0.28
SH2D3C-206ENST00000429553 KIF5AQ12840 1032 aa16.77■□□□□ 0.28
SH2D3C-206ENST00000429553 RIC3Q7Z5B4 369 aa16.77■□□□□ 0.28
SH2D3C-206ENST00000429553 CCDC47Q96A33 483 aaKnown RBP16.77■□□□□ 0.28
SH2D3C-206ENST00000429553 MYH13Q9UKX3 1938 aa16.77■□□□□ 0.27
SH2D3C-206ENST00000429553 MED1Q15648 1581 aaPredicted RBP16.77■□□□□ 0.27
SH2D3C-206ENST00000429553 ZNF263O14978 683 aa16.77■□□□□ 0.27
SH2D3C-206ENST00000429553 DIAPH2O60879 1101 aa16.77■□□□□ 0.27
SH2D3C-206ENST00000429553 KCTD19Q17RG1 926 aaPredicted RBP16.77■□□□□ 0.27
SH2D3C-206ENST00000429553 WASHC4Q2M389 1173 aa16.77■□□□□ 0.27
SH2D3C-206ENST00000429553 CADPS2Q86UW7 1296 aa16.77■□□□□ 0.27
SH2D3C-206ENST00000429553 PURBQ96QR8 312 aaKnown RBP16.77■□□□□ 0.27
SH2D3C-206ENST00000429553 PANK4Q9NVE7 773 aa16.77■□□□□ 0.27
SH2D3C-206ENST00000429553 SRPRBQ9Y5M8 271 aaKnown RBP16.77■□□□□ 0.27
SH2D3C-206ENST00000429553 PPIP5K2O43314 1243 aa16.76■□□□□ 0.27
SH2D3C-206ENST00000429553 IPO7O95373 1038 aaKnown RBP16.76■□□□□ 0.27
SH2D3C-206ENST00000429553 NTRK3Q16288 839 aa16.76■□□□□ 0.27
SH2D3C-206ENST00000429553 CCDC96Q2M329 555 aa16.76■□□□□ 0.27
SH2D3C-206ENST00000429553 MPRIPQ6WCQ1 1025 aa16.76■□□□□ 0.27
SH2D3C-206ENST00000429553 CYB5R4Q7L1T6 521 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms