RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 TRIM21P19474 475 aaKnown RBP16.75■□□□□ 0.27
CACTIN-203ENST00000429344 GPSM2P81274 684 aa16.75■□□□□ 0.27
CACTIN-203ENST00000429344 CYP27A1Q02318 531 aa16.75■□□□□ 0.27
CACTIN-203ENST00000429344 DOK7Q18PE1 504 aa16.75■□□□□ 0.27
CACTIN-203ENST00000429344 SLC44A5Q8NCS7 719 aa16.75■□□□□ 0.27
CACTIN-203ENST00000429344 LRRIQ3A6PVS8 624 aaPredicted RBP16.74■□□□□ 0.27
CACTIN-203ENST00000429344 TULP1O00294 542 aaPredicted RBP16.74■□□□□ 0.27
CACTIN-203ENST00000429344 COPB1P53618 953 aaKnown RBP16.74■□□□□ 0.27
CACTIN-203ENST00000429344 PAK1Q13153 545 aa16.74■□□□□ 0.27
CACTIN-203ENST00000429344 TXNRD1Q16881 649 aa16.74■□□□□ 0.27
CACTIN-203ENST00000429344 NUP188Q5SRE5 1749 aa16.74■□□□□ 0.27
CACTIN-203ENST00000429344 CYP26C1Q6V0L0 522 aa16.74■□□□□ 0.27
CACTIN-203ENST00000429344 SH3RF3Q8TEJ3 882 aaPredicted RBP16.74■□□□□ 0.27
CACTIN-203ENST00000429344 GBP3Q9H0R5 595 aa16.74■□□□□ 0.27
CACTIN-203ENST00000429344 POTEB2H3BUK9 544 aa16.74■□□□□ 0.27
CACTIN-203ENST00000429344 KIF5BP33176 963 aa16.74■□□□□ 0.27
CACTIN-203ENST00000429344 TMTC1Q8IUR5 882 aa16.74■□□□□ 0.27
CACTIN-203ENST00000429344 GPATCH11Q8N954 259 aa16.74■□□□□ 0.27
CACTIN-203ENST00000429344 ATP8A2Q9NTI2 1148 aa16.74■□□□□ 0.27
CACTIN-203ENST00000429344 ABHD10Q9NUJ1 306 aa16.74■□□□□ 0.27
CACTIN-203ENST00000429344 MAGEC2Q9UBF1 373 aaPredicted RBP16.74■□□□□ 0.27
CACTIN-203ENST00000429344 ARPP21Q9UBL0 812 aaPredicted RBP16.74■□□□□ 0.27
CACTIN-203ENST00000429344 MPHOSPH10O00566 681 aaKnown RBP16.74■□□□□ 0.27
CACTIN-203ENST00000429344 MYO1BO43795 1136 aa16.74■□□□□ 0.27
CACTIN-203ENST00000429344 RNF40O75150 1001 aa16.74■□□□□ 0.27
CACTIN-203ENST00000429344 ENOX2Q16206 610 aaKnown RBP16.74■□□□□ 0.27
CACTIN-203ENST00000429344 TRIML1Q8N9V2 468 aa16.74■□□□□ 0.27
CACTIN-203ENST00000429344 TSPYL1Q9H0U9 437 aa16.74■□□□□ 0.27
CACTIN-203ENST00000429344 LUC7L2Q9Y383 392 aaKnown RBP16.74■□□□□ 0.27
CACTIN-203ENST00000429344 EPN1Q9Y6I3 576 aaPredicted RBP16.74■□□□□ 0.27
CACTIN-203ENST00000429344 STAT6P42226 847 aa16.73■□□□□ 0.27
CACTIN-203ENST00000429344 BTDP43251 543 aa16.73■□□□□ 0.27
CACTIN-203ENST00000429344 EIF6P56537 245 aaKnown RBP16.73■□□□□ 0.27
CACTIN-203ENST00000429344 IQUBQ8NA54 791 aa16.73■□□□□ 0.27
CACTIN-203ENST00000429344 BRIP1Q9BX63 1249 aa16.73■□□□□ 0.27
CACTIN-203ENST00000429344 SHANK3Q9BYB0 1731 aa16.73■□□□□ 0.27
CACTIN-203ENST00000429344 ZNF185O15231 689 aa16.73■□□□□ 0.27
CACTIN-203ENST00000429344 PP2D1A8MPX8 630 aa16.72■□□□□ 0.27
CACTIN-203ENST00000429344 GYS1P13807 737 aa16.72■□□□□ 0.27
CACTIN-203ENST00000429344 SARSP49591 514 aaKnown RBP16.72■□□□□ 0.27
CACTIN-203ENST00000429344 NUP98P52948 1817 aa16.72■□□□□ 0.27
CACTIN-203ENST00000429344 CALM1P0DP23 149 aa16.72■□□□□ 0.27
CACTIN-203ENST00000429344 CALM2P0DP24 149 aa16.72■□□□□ 0.27
CACTIN-203ENST00000429344 CALM3P0DP25 149 aa16.72■□□□□ 0.27
CACTIN-203ENST00000429344 SAMD1Q6SPF0 538 aaPredicted RBP16.72■□□□□ 0.27
CACTIN-203ENST00000429344 HEATR3Q7Z4Q2 680 aa16.72■□□□□ 0.27
CACTIN-203ENST00000429344 SRLQ86TD4 932 aa16.72■□□□□ 0.27
CACTIN-203ENST00000429344 L1RE1Q9UN81 338 aa16.72■□□□□ 0.27
CACTIN-203ENST00000429344 TULP2O00295 520 aa16.72■□□□□ 0.27
CACTIN-203ENST00000429344 ATP1A1P05023 1023 aaKnown RBP16.72■□□□□ 0.27
CACTIN-203ENST00000429344 ZNF287Q9HBT7 754 aa16.72■□□□□ 0.27
CACTIN-203ENST00000429344 CD209Q9NNX6 404 aa16.72■□□□□ 0.27
CACTIN-203ENST00000429344 USP17L3A6NCW0 530 aa16.71■□□□□ 0.27
CACTIN-203ENST00000429344 USP17L4A6NCW7 530 aa16.71■□□□□ 0.27
CACTIN-203ENST00000429344 SCNN1DP51172 638 aa16.71■□□□□ 0.27
CACTIN-203ENST00000429344 RASGRP2Q7LDG7 609 aa16.71■□□□□ 0.27
CACTIN-203ENST00000429344 USP17L1Q7RTZ2 530 aa16.71■□□□□ 0.27
CACTIN-203ENST00000429344 GPKOWQ92917 476 aaPredicted RBP eCLIP16.71■□□□□ 0.27
CACTIN-203ENST00000429344 MMS19Q96T76 1030 aa16.71■□□□□ 0.27
CACTIN-203ENST00000429344 NAA15Q9BXJ9 866 aaKnown RBP16.71■□□□□ 0.27
CACTIN-203ENST00000429344 TTC26A0AVF1 554 aa16.71■□□□□ 0.27
CACTIN-203ENST00000429344 PPP1R3GB7ZBB8 358 aa16.71■□□□□ 0.27
CACTIN-203ENST00000429344 GOLGA8HP0CJ92 632 aa16.71■□□□□ 0.27
CACTIN-203ENST00000429344 ATP2B4P23634 1241 aa16.71■□□□□ 0.27
CACTIN-203ENST00000429344 ZNHIT6Q9NWK9 470 aaKnown RBP16.71■□□□□ 0.27
CACTIN-203ENST00000429344 LTBP4Q8N2S1 1624 aa16.71■□□□□ 0.27
CACTIN-203ENST00000429344 IBSPP21815 317 aaPredicted RBP16.71■□□□□ 0.27
CACTIN-203ENST00000429344 CXCR5P32302 372 aa16.71■□□□□ 0.27
CACTIN-203ENST00000429344 DPP8Q6V1X1 898 aaPredicted RBP16.71■□□□□ 0.27
CACTIN-203ENST00000429344 ANKRD13CQ8N6S4 541 aa16.71■□□□□ 0.27
CACTIN-203ENST00000429344 AFAP1L1Q8TED9 768 aa16.71■□□□□ 0.27
CACTIN-203ENST00000429344 NDUFA10O95299 355 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 IVLP07476 585 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 IDEP14735 1019 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 VEGFAP15692 232 aaPredicted RBP16.7■□□□□ 0.26
CACTIN-203ENST00000429344 C2orf54Q08AI8 447 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 CCDC96Q2M329 555 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 CCDC178Q5BJE1 867 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 SLF2Q8IX21 1173 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 MICALL1Q8N3F8 863 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 PNMA1Q8ND90 353 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 ADRA2BP18089 450 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 MTIF2P46199 727 aaKnown RBP16.7■□□□□ 0.26
CACTIN-203ENST00000429344 SMCR8Q8TEV9 937 aaPredicted RBP16.7■□□□□ 0.26
CACTIN-203ENST00000429344 DEF6Q9H4E7 631 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 RBM28Q9NW13 759 aaKnown RBP16.7■□□□□ 0.26
CACTIN-203ENST00000429344 SAR1BQ9Y6B6 198 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 DUSP10Q9Y6W6 482 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 B4DLN1 442 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 GSDMAQ96QA5 445 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
CACTIN-203ENST00000429344 MYH14Q7Z406 1995 aaKnown RBP16.7■□□□□ 0.26
CACTIN-203ENST00000429344 FAM237AA0A1B0GTK4 181 aa16.69■□□□□ 0.26
CACTIN-203ENST00000429344 CCDC194A0A1B0GVG4 234 aa16.69■□□□□ 0.26
CACTIN-203ENST00000429344 MAP2K7O14733 419 aa16.69■□□□□ 0.26
CACTIN-203ENST00000429344 MMP10P09238 476 aa16.69■□□□□ 0.26
CACTIN-203ENST00000429344 PRCPP42785 496 aa16.69■□□□□ 0.26
CACTIN-203ENST00000429344 WHAMMP3Q1A5X7 153 aa16.69■□□□□ 0.26
CACTIN-203ENST00000429344 PLCH1Q4KWH8 1693 aa16.69■□□□□ 0.26
CACTIN-203ENST00000429344 FAM170AA1A519 330 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms