RNA–Protein interactions for RNA: ENST00000429339.5

RAE1-205, Transcript of ribonucleic acid export 1, humanhuman

TSL 5

Gene RAE1, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-205ENST00000429339 SMC4Q9NTJ3 1288 aa12.36□□□□□ -0.43
RAE1-205ENST00000429339 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.36□□□□□ -0.43
RAE1-205ENST00000429339 FAM184BQ9ULE4 1060 aa12.36□□□□□ -0.43
RAE1-205ENST00000429339 PPP1R9AQ9ULJ8 1098 aa12.36□□□□□ -0.43
RAE1-205ENST00000429339 GNEQ9Y223 722 aaKnown RBP12.36□□□□□ -0.43
RAE1-205ENST00000429339 SLC4A7Q9Y6M7 1214 aa12.36□□□□□ -0.43
RAE1-205ENST00000429339 SIP14410 1827 aa12.36□□□□□ -0.43
RAE1-205ENST00000429339 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.35□□□□□ -0.43
RAE1-205ENST00000429339 MPHOSPH10O00566 681 aaKnown RBP12.35□□□□□ -0.43
RAE1-205ENST00000429339 IDH1O75874 414 aaKnown RBP12.35□□□□□ -0.43
RAE1-205ENST00000429339 CYP2C9P11712 490 aa12.35□□□□□ -0.43
RAE1-205ENST00000429339 USP5P45974 858 aa12.35□□□□□ -0.43
RAE1-205ENST00000429339 CNTN2Q02246 1040 aa12.35□□□□□ -0.43
RAE1-205ENST00000429339 POLA2Q14181 598 aa12.35□□□□□ -0.43
RAE1-205ENST00000429339 ALDH1L2Q3SY69 923 aa12.35□□□□□ -0.43
RAE1-205ENST00000429339 GNASQ5JWF2 1037 aa12.35□□□□□ -0.43
RAE1-205ENST00000429339 TTC39AQ5SRH9 613 aa12.35□□□□□ -0.43
RAE1-205ENST00000429339 FAM83BQ5T0W9 1011 aa12.35□□□□□ -0.43
RAE1-205ENST00000429339 LCORLQ8N3X6 602 aa12.35□□□□□ -0.43
RAE1-205ENST00000429339 GDPD5Q8WTR4 605 aa12.35□□□□□ -0.43
RAE1-205ENST00000429339 HLA-CQ95604 372 aa12.35□□□□□ -0.43
RAE1-205ENST00000429339 PDGFCQ9NRA1 345 aa12.35□□□□□ -0.43
RAE1-205ENST00000429339 TRMT13Q9NUP7 481 aaKnown RBP12.35□□□□□ -0.43
RAE1-205ENST00000429339 KMT2EQ8IZD2 1858 aa12.34□□□□□ -0.43
RAE1-205ENST00000429339 TCRBV5S4A2TA0A5A2 114 aa12.34□□□□□ -0.43
RAE1-205ENST00000429339 POTEB3A0JP26 581 aa12.34□□□□□ -0.43
RAE1-205ENST00000429339 SLC25A27O95847 323 aa12.34□□□□□ -0.43
RAE1-205ENST00000429339 EEF2P13639 858 aaKnown RBP12.34□□□□□ -0.43
RAE1-205ENST00000429339 KCTD2Q14681 263 aa12.34□□□□□ -0.43
RAE1-205ENST00000429339 AAK1Q2M2I8 961 aa12.34□□□□□ -0.43
RAE1-205ENST00000429339 POTEBQ6S5H4 581 aa12.34□□□□□ -0.43
RAE1-205ENST00000429339 CTAGE1Q96RT6 745 aa12.34□□□□□ -0.43
RAE1-205ENST00000429339 CCDC8Q9H0W5 538 aaPredicted RBP12.34□□□□□ -0.43
RAE1-205ENST00000429339 CABP5Q9NP86 173 aa12.34□□□□□ -0.43
RAE1-205ENST00000429339 DCP1AQ9NPI6 582 aaPredicted RBP12.34□□□□□ -0.43
RAE1-205ENST00000429339 SLC5A4Q9NY91 659 aa12.34□□□□□ -0.43
RAE1-205ENST00000429339 COG5Q9UP83 839 aa12.34□□□□□ -0.43
RAE1-205ENST00000429339 CNPY2Q9Y2B0 182 aa12.34□□□□□ -0.43
RAE1-205ENST00000429339 MROH7Q68CQ1 1323 aa12.34□□□□□ -0.43
RAE1-205ENST00000429339 PLXNA3P51805 1871 aa12.34□□□□□ -0.43
RAE1-205ENST00000429339 WDR87Q6ZQQ6 2873 aa12.33□□□□□ -0.44
RAE1-205ENST00000429339 SOWAHBA6NEL2 793 aa12.33□□□□□ -0.44
RAE1-205ENST00000429339 WDR46O15213 610 aaKnown RBP12.33□□□□□ -0.44
RAE1-205ENST00000429339 ICA1Q05084 483 aa12.33□□□□□ -0.44
RAE1-205ENST00000429339 ITGA7Q13683 1181 aa12.33□□□□□ -0.44
RAE1-205ENST00000429339 TMEM179Q6ZVK1 233 aa12.33□□□□□ -0.44
RAE1-205ENST00000429339 ARMCX2Q7L311 632 aa12.33□□□□□ -0.44
RAE1-205ENST00000429339 DEFB128Q7Z7B8 93 aa12.33□□□□□ -0.44
RAE1-205ENST00000429339 TTC6Q86TZ1 520 aa12.33□□□□□ -0.44
RAE1-205ENST00000429339 CCDC144CPQ8IYA2 1237 aa12.33□□□□□ -0.44
RAE1-205ENST00000429339 GJD3Q8N144 294 aa12.33□□□□□ -0.44
RAE1-205ENST00000429339 PURBQ96QR8 312 aaKnown RBP12.33□□□□□ -0.44
RAE1-205ENST00000429339 GPR108Q9NPR9 543 aa12.33□□□□□ -0.44
RAE1-205ENST00000429339 MYH4Q9Y623 1939 aa12.33□□□□□ -0.44
RAE1-205ENST00000429339 ZBBXA8MT70 800 aa12.32□□□□□ -0.44
RAE1-205ENST00000429339 SMPD1P17405 629 aa12.32□□□□□ -0.44
RAE1-205ENST00000429339 TMEM67Q5HYA8 995 aa12.32□□□□□ -0.44
RAE1-205ENST00000429339 ATF7IPQ6VMQ6 1270 aa12.32□□□□□ -0.44
RAE1-205ENST00000429339 HFE2Q6ZVN8 426 aa12.32□□□□□ -0.44
RAE1-205ENST00000429339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.32□□□□□ -0.44
RAE1-205ENST00000429339 FAM9BQ8IZU0 186 aa12.32□□□□□ -0.44
RAE1-205ENST00000429339 PRSS33Q8NF86 280 aa12.32□□□□□ -0.44
RAE1-205ENST00000429339 VTI1AQ96AJ9 217 aa12.32□□□□□ -0.44
RAE1-205ENST00000429339 TSPYL2Q9H2G4 693 aaPredicted RBP12.32□□□□□ -0.44
RAE1-205ENST00000429339 UBE2ZQ9H832 354 aaPredicted RBP12.32□□□□□ -0.44
RAE1-205ENST00000429339 MCM9Q9NXL9 1143 aa12.32□□□□□ -0.44
RAE1-205ENST00000429339 IER5LQ5T953 404 aa12.31□□□□□ -0.44
RAE1-205ENST00000429339 SNRNP48Q6IEG0 339 aaKnown RBP12.31□□□□□ -0.44
RAE1-205ENST00000429339 TAPT1Q6NXT6 567 aa12.31□□□□□ -0.44
RAE1-205ENST00000429339 HERC6Q8IVU3 1022 aa12.31□□□□□ -0.44
RAE1-205ENST00000429339 MSL3Q8N5Y2 521 aaKnown RBP12.31□□□□□ -0.44
RAE1-205ENST00000429339 FAM133AQ8N9E0 248 aa12.31□□□□□ -0.44
RAE1-205ENST00000429339 PCSK9Q8NBP7 692 aaKnown RBP12.31□□□□□ -0.44
RAE1-205ENST00000429339 ALDH8A1Q9H2A2 487 aaPredicted RBP12.31□□□□□ -0.44
RAE1-205ENST00000429339 SUGCTQ9HAC7 445 aa12.31□□□□□ -0.44
RAE1-205ENST00000429339 DNAH14Q0VDD8 3507 aa12.31□□□□□ -0.44
RAE1-205ENST00000429339 RIF1Q5UIP0 2472 aaKnown RBP12.3□□□□□ -0.44
RAE1-205ENST00000429339 BCAR3O75815 825 aa12.3□□□□□ -0.44
RAE1-205ENST00000429339 POLR3DP05423 398 aaPredicted RBP12.3□□□□□ -0.44
RAE1-205ENST00000429339 PDE6AP16499 860 aa12.3□□□□□ -0.44
RAE1-205ENST00000429339 DEFB103AP81534 67 aa12.3□□□□□ -0.44
RAE1-205ENST00000429339 CCDC174Q6PII3 467 aa12.3□□□□□ -0.44
RAE1-205ENST00000429339 ZNF467Q7Z7K2 595 aaPredicted RBP12.3□□□□□ -0.44
RAE1-205ENST00000429339 SSH3Q8TE77 659 aa12.3□□□□□ -0.44
RAE1-205ENST00000429339 C1orf115Q9H7X2 142 aa12.3□□□□□ -0.44
RAE1-205ENST00000429339 RAVER2Q9HCJ3 691 aaKnown RBP12.3□□□□□ -0.44
RAE1-205ENST00000429339 TRIM27P14373 513 aa12.29□□□□□ -0.44
RAE1-205ENST00000429339 CDK8P49336 464 aa12.29□□□□□ -0.44
RAE1-205ENST00000429339 G3BP1Q13283 466 aaKnown RBP eCLIP12.29□□□□□ -0.441e-6■■□□□ 12.9
RAE1-205ENST00000429339 FSCN1Q16658 493 aaKnown RBP12.29□□□□□ -0.44
RAE1-205ENST00000429339 RASGRP2Q7LDG7 609 aa12.29□□□□□ -0.44
RAE1-205ENST00000429339 UIMC1Q96RL1 719 aa12.29□□□□□ -0.44
RAE1-205ENST00000429339 ABHD16BQ9H3Z7 469 aa12.29□□□□□ -0.44
RAE1-205ENST00000429339 ARMT1Q9H993 441 aa12.29□□□□□ -0.44
RAE1-205ENST00000429339 PTPRZ1P23471 2315 aaPredicted RBP12.29□□□□□ -0.44
RAE1-205ENST00000429339 ZNF536O15090 1300 aa12.29□□□□□ -0.44
RAE1-205ENST00000429339 GRXCR2A6NFK2 248 aa12.28□□□□□ -0.44
RAE1-205ENST00000429339 E9PSI1 815 aa12.28□□□□□ -0.44
RAE1-205ENST00000429339 TLR3O15455 904 aaKnown RBP12.28□□□□□ -0.44
RAE1-205ENST00000429339 GTPBP6O43824 516 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms