RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 EPHA10Q5JZY3 1008 aa15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 KRI1Q8N9T8 703 aaKnown RBP15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 ANGEL1Q9UNK9 670 aaKnown RBP15.99■□□□□ 0.15
SYNGAP1-203ENST00000428982 USP5P45974 858 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 SUSD4Q5VX71 490 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 ARL10Q8N8L6 244 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 UBAC1Q9BSL1 405 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 IQSEC3Q9UPP2 1182 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 SYCP3Q8IZU3 236 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 NLGN1Q8N2Q7 840 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 MLKLQ8NB16 471 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 WHAMMQ8TF30 809 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 PPP1R12CQ9BZL4 782 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 SRP68Q9UHB9 627 aaKnown RBP15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 PHRF1Q9P1Y6 1649 aaKnown RBP15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 RASSF10A6NK89 507 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 ZMYND10O75800 440 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 RPS8P62241 208 aaKnown RBP15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 SPTY2D1Q68D10 685 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 SPECC1LQ69YQ0 1117 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 JADE2Q9NQC1 790 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 LMO7Q8WWI1 1683 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 FAM208AQ9UK61 1670 aaKnown RBP15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 WDR19Q8NEZ3 1342 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 CEP104O60308 925 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 MARCKSP29966 332 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 ZNF219Q9P2Y4 722 aaPredicted RBP15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 HPCAL4Q9UM19 191 aa15.98■□□□□ 0.15
SYNGAP1-203ENST00000428982 AKR1B15C9JRZ8 316 aaPredicted RBP15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 ADRA2BP18089 450 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 MAGEA8P43361 318 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 RAB27AP51159 221 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 USP4Q13107 963 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 ITPK1Q13572 414 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 RABL6Q3YEC7 729 aaPredicted RBP15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 CCDC170Q8IYT3 715 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 MSANTD4Q8NCY6 345 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 FBF1Q8TES7 1133 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 DDX27Q96GQ7 796 aaKnown RBP15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 ANKZF1Q9H8Y5 726 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 TTF2Q9UNY4 1162 aaKnown RBP15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 STRCP1A6NGW2 1772 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 EIF4E1BA6NMX2 242 aaKnown RBP15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 PPP6R2O75170 966 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 COQ9O75208 318 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 ATP11AP98196 1134 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 TAF11Q15544 211 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 RC3H1Q5TC82 1133 aaKnown RBP15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 ZNF365Q70YC5 407 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 CHST3Q7LGC8 479 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 RTN3O95197 1032 aaPredicted RBP15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 PFKFB1P16118 471 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 WLSQ5T9L3 541 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 RAB21Q9UL25 225 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 GUCA1BQ9UMX6 200 aa15.97■□□□□ 0.15
SYNGAP1-203ENST00000428982 NDUFA8P51970 172 aa15.96■□□□□ 0.15
SYNGAP1-203ENST00000428982 SLC9C2Q5TAH2 1124 aa15.96■□□□□ 0.15
SYNGAP1-203ENST00000428982 SPAG1Q07617 926 aa15.96■□□□□ 0.15
SYNGAP1-203ENST00000428982 SLC39A14Q15043 492 aa15.96■□□□□ 0.15
SYNGAP1-203ENST00000428982 ZNF804AQ7Z570 1209 aa15.96■□□□□ 0.15
SYNGAP1-203ENST00000428982 MICU3Q86XE3 530 aa15.96■□□□□ 0.15
SYNGAP1-203ENST00000428982 FMR1NBQ8N0W7 255 aaPredicted RBP15.96■□□□□ 0.15
SYNGAP1-203ENST00000428982 SLC35F6Q8N357 371 aa15.96■□□□□ 0.15
SYNGAP1-203ENST00000428982 FANCLQ9NW38 375 aa15.96■□□□□ 0.15
SYNGAP1-203ENST00000428982 AHDC1Q5TGY3 1603 aaPredicted RBP15.96■□□□□ 0.15
SYNGAP1-203ENST00000428982 RINLQ6ZS11 566 aa15.96■□□□□ 0.15
SYNGAP1-203ENST00000428982 TTLL11Q8NHH1 800 aa15.96■□□□□ 0.15
SYNGAP1-203ENST00000428982 SLC26A6Q9BXS9 759 aa15.96■□□□□ 0.15
SYNGAP1-203ENST00000428982 OSBPL1AQ9BXW6 950 aa15.96■□□□□ 0.15
SYNGAP1-203ENST00000428982 PUS3Q9BZE2 481 aaKnown RBP15.96■□□□□ 0.15
SYNGAP1-203ENST00000428982 PPARDQ03181 441 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 DPCR1Q3MIW9 517 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 CCDC92Q53HC0 331 aaPredicted RBP15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 RILPL1Q5EBL4 403 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 SELENOOQ9BVL4 669 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 AATFQ9NY61 560 aaKnown RBP eCLIP15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 ANKRD33BA6NCL7 494 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 LDHCP07864 332 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 CTCFP49711 727 aaPredicted RBP15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 ROR2Q01974 943 aaKnown RBP15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 ERFEQ4G0M1 354 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 ANKRD23Q86SG2 305 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 SLF2Q8IX21 1173 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 KCNH3Q9ULD8 1083 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 EXOSC10Q01780 885 aaKnown RBP15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 ST3GAL1Q11201 340 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 EHD4Q9H223 541 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 SH2D4BQ5SQS7 431 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 TOGARAM2Q6ZUX3 1019 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 MAGEC2Q9UBF1 373 aaPredicted RBP15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 MAST3O60307 1309 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 ZMYM6O95789 1325 aa15.95■□□□□ 0.14
SYNGAP1-203ENST00000428982 PARP4Q9UKK3 1724 aaKnown RBP15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 GNAT2P19087 354 aa15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 VAV2P52735 878 aa15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 PTPN21Q16825 1174 aa15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 TXNRD1Q16881 649 aa15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 GKAP1Q5VSY0 366 aaPredicted RBP15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 TRIML1Q8N9V2 468 aa15.94■□□□□ 0.14
SYNGAP1-203ENST00000428982 FKBP15Q5T1M5 1219 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms