RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 TAB2Q9NYJ8 693 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 LRP2BPQ9P2M1 347 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.92□□□□□ -0.82
CDH13-202ENST00000428848 CNTNAP4Q9C0A0 1308 aa9.92□□□□□ -0.82
CDH13-202ENST00000428848 COL5A3P25940 1745 aaPredicted RBP9.91□□□□□ -0.82
CDH13-202ENST00000428848 MAGEB6P1A0A0J9YX57 407 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 N4BP1O75113 896 aaKnown RBP9.91□□□□□ -0.82
CDH13-202ENST00000428848 COBLO75128 1261 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 CLSTN1O94985 981 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 NDUFA10O95299 355 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 KRT9P35527 623 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 GSCP56915 257 aaPredicted RBP9.91□□□□□ -0.82
CDH13-202ENST00000428848 FAM98CQ17RN3 349 aaKnown RBP9.91□□□□□ -0.82
CDH13-202ENST00000428848 IFIT1BQ5T764 474 aaKnown RBP9.91□□□□□ -0.82
CDH13-202ENST00000428848 RC3H1Q5TC82 1133 aaKnown RBP9.91□□□□□ -0.82
CDH13-202ENST00000428848 CCDC125Q86Z20 511 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 ANKRD18AQ8IVF6 992 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 SRBD1Q8N5C6 995 aaKnown RBP9.91□□□□□ -0.82
CDH13-202ENST00000428848 ZNF507Q8TCN5 953 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 DNAJC7Q99615 494 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 CHP1Q99653 195 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 SLF1Q9BQI6 1058 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 FAM107BQ9H098 131 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.91□□□□□ -0.82
CDH13-202ENST00000428848 EPN1Q9Y6I3 576 aaPredicted RBP9.91□□□□□ -0.82
CDH13-202ENST00000428848 LAMB1P07942 1786 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 COL1A1P02452 1464 aaPredicted RBP9.91□□□□□ -0.82
CDH13-202ENST00000428848 A0A1W2PQC6 194 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 H7C1D1 291 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 RPN1P04843 607 aaKnown RBP9.91□□□□□ -0.82
CDH13-202ENST00000428848 RHOXF2BP0C7M4 288 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 CCDC172P0C7W6 258 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 HMGB2P26583 209 aaKnown RBP9.91□□□□□ -0.82
CDH13-202ENST00000428848 PRCPP42785 496 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 CHRNDQ07001 517 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 ITPK1Q13572 414 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 NBPF20Q3BBV1 942 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 CAVIN4Q5BKX8 364 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 ARL6IP4Q66PJ3 421 aaKnown RBP9.91□□□□□ -0.82
CDH13-202ENST00000428848 FAM71BQ8TC56 605 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 DRC1Q96MC2 740 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 NUP88Q99567 741 aaPredicted RBP9.91□□□□□ -0.82
CDH13-202ENST00000428848 RHOXF2Q9BQY4 288 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 HAUS4Q9H6D7 363 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 VIPAS39Q9H9C1 493 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 RMND1Q9NWS8 449 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 VPS18Q9P253 973 aa9.91□□□□□ -0.82
CDH13-202ENST00000428848 SCN7AQ01118 1682 aa9.9□□□□□ -0.82
CDH13-202ENST00000428848 LRRIQ3A6PVS8 624 aaPredicted RBP9.9□□□□□ -0.82
CDH13-202ENST00000428848 KIF1CO43896 1103 aaKnown RBP9.9□□□□□ -0.82
CDH13-202ENST00000428848 AARSP49588 968 aaKnown RBP eCLIP9.9□□□□□ -0.82
CDH13-202ENST00000428848 USP14P54578 494 aa9.9□□□□□ -0.82
CDH13-202ENST00000428848 UBE4AQ14139 1066 aa9.9□□□□□ -0.82
CDH13-202ENST00000428848 SF3B3Q15393 1217 aaKnown RBP9.9□□□□□ -0.82
CDH13-202ENST00000428848 PAPD7Q5XG87 772 aaKnown RBP9.9□□□□□ -0.82
CDH13-202ENST00000428848 WDR59Q6PJI9 974 aa9.9□□□□□ -0.82
CDH13-202ENST00000428848 IQCA1Q86XH1 822 aa9.9□□□□□ -0.82
CDH13-202ENST00000428848 ADSSL1Q8N142 457 aa9.9□□□□□ -0.82
CDH13-202ENST00000428848 ANKRD20A12PQ8NF67 263 aa9.9□□□□□ -0.82
CDH13-202ENST00000428848 FAN1Q9Y2M0 1017 aa9.9□□□□□ -0.82
CDH13-202ENST00000428848 GDAQ9Y2T3 454 aa9.9□□□□□ -0.82
CDH13-202ENST00000428848 CEP83Q9Y592 693 aa9.9□□□□□ -0.82
CDH13-202ENST00000428848 MYH1P12882 1939 aa9.9□□□□□ -0.82
CDH13-202ENST00000428848 TTC26A0AVF1 554 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 LGALS16A8MUM7 142 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 ADAMTS3O15072 1205 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 ORC4O43929 436 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 PARP1P09874 1014 aaKnown RBP9.9□□□□□ -0.83
CDH13-202ENST00000428848 SCG2P13521 617 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 LONP1P36776 959 aaKnown RBP9.9□□□□□ -0.83
CDH13-202ENST00000428848 HERVK_113P62684 666 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 KCNB1Q14721 858 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 MEA1Q16626 185 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 PFKFB3Q16875 520 aaPredicted RBP9.9□□□□□ -0.83
CDH13-202ENST00000428848 WWC2Q6AWC2 1192 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 NCAPH2Q6IBW4 605 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 KRT27Q7Z3Y8 459 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 RPAINQ86UA6 219 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 MB21D1Q8N884 522 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 OR8K1Q8NGG5 319 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 ZNF384Q8TF68 577 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 PLCD4Q9BRC7 762 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 MED4Q9NPJ6 270 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 BSDC1Q9NW68 430 aaPredicted RBP9.9□□□□□ -0.83
CDH13-202ENST00000428848 CAPN11Q9UMQ6 739 aa9.9□□□□□ -0.83
CDH13-202ENST00000428848 ZC3H4Q9UPT8 1303 aaKnown RBP9.89□□□□□ -0.83
CDH13-202ENST00000428848 MYH14Q7Z406 1995 aaKnown RBP9.89□□□□□ -0.83
CDH13-202ENST00000428848 CASZ1Q86V15 1759 aa9.89□□□□□ -0.83
CDH13-202ENST00000428848 CYP2D7A0A087X1C5 515 aa9.89□□□□□ -0.83
CDH13-202ENST00000428848 KLRC4O43908 158 aa9.89□□□□□ -0.83
CDH13-202ENST00000428848 VEGFAP15692 232 aaPredicted RBP9.89□□□□□ -0.83
CDH13-202ENST00000428848 UBXN1Q04323 297 aa9.89□□□□□ -0.83
CDH13-202ENST00000428848 SEMA3FQ13275 785 aa9.89□□□□□ -0.83
CDH13-202ENST00000428848 NAALADL2Q58DX5 795 aa9.89□□□□□ -0.83
CDH13-202ENST00000428848 PIK3AP1Q6ZUJ8 805 aa9.89□□□□□ -0.83
CDH13-202ENST00000428848 DEFB132Q7Z7B7 95 aa9.89□□□□□ -0.83
CDH13-202ENST00000428848 TTYH3Q9C0H2 523 aa9.89□□□□□ -0.83
CDH13-202ENST00000428848 DONSONQ9NYP3 566 aa9.89□□□□□ -0.83
CDH13-202ENST00000428848 TRIM10Q9UDY6 481 aa9.89□□□□□ -0.83
CDH13-202ENST00000428848 SRCAPQ6ZRS2 3230 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms