RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 CCDC96Q2M329 555 aa20.21■□□□□ 0.83
TRIM39-209ENST00000428728 MCMDC2Q4G0Z9 681 aa20.21■□□□□ 0.83
TRIM39-209ENST00000428728 CCDC174Q6PII3 467 aa20.21■□□□□ 0.83
TRIM39-209ENST00000428728 MAMDC4Q6UXC1 1216 aa20.21■□□□□ 0.83
TRIM39-209ENST00000428728 ZNF467Q7Z7K2 595 aaPredicted RBP20.21■□□□□ 0.83
TRIM39-209ENST00000428728 STAG1Q8WVM7 1258 aa20.21■□□□□ 0.83
TRIM39-209ENST00000428728 FGD4Q96M96 766 aa20.21■□□□□ 0.83
TRIM39-209ENST00000428728 AGBL1Q96MI9 1066 aa20.21■□□□□ 0.83
TRIM39-209ENST00000428728 ACAD9Q9H845 621 aa20.21■□□□□ 0.83
TRIM39-209ENST00000428728 RNF146Q9NTX7 359 aa20.21■□□□□ 0.83
TRIM39-209ENST00000428728 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.21■□□□□ 0.83
TRIM39-209ENST00000428728 FAM184BQ9ULE4 1060 aa20.21■□□□□ 0.83
TRIM39-209ENST00000428728 MYH6P13533 1939 aa20.2■□□□□ 0.82
TRIM39-209ENST00000428728 A0A1W2PQ45 241 aaPredicted RBP20.2■□□□□ 0.82
TRIM39-209ENST00000428728 A0A1W2PQY0 241 aa20.2■□□□□ 0.82
TRIM39-209ENST00000428728 ORC4O43929 436 aa20.2■□□□□ 0.82
TRIM39-209ENST00000428728 FDX1P10109 184 aa20.2■□□□□ 0.82
TRIM39-209ENST00000428728 HAND2P61296 217 aa20.2■□□□□ 0.82
TRIM39-209ENST00000428728 ALX1Q15699 326 aa20.2■□□□□ 0.82
TRIM39-209ENST00000428728 SH3RF1Q7Z6J0 888 aa20.2■□□□□ 0.82
TRIM39-209ENST00000428728 DEFB123Q8N688 67 aa20.2■□□□□ 0.82
TRIM39-209ENST00000428728 ZNF536O15090 1300 aa20.2■□□□□ 0.82
TRIM39-209ENST00000428728 CCDC171Q6TFL3 1326 aa20.2■□□□□ 0.82
TRIM39-209ENST00000428728 FGAP02671 866 aa20.19■□□□□ 0.82
TRIM39-209ENST00000428728 HSPD1P10809 573 aaKnown RBP20.19■□□□□ 0.82
TRIM39-209ENST00000428728 ALAS1P13196 640 aa20.19■□□□□ 0.82
TRIM39-209ENST00000428728 CNTN2Q02246 1040 aa20.19■□□□□ 0.82
TRIM39-209ENST00000428728 TLE2Q04725 743 aa20.19■□□□□ 0.82
TRIM39-209ENST00000428728 ACVR2BQ13705 512 aa20.19■□□□□ 0.82
TRIM39-209ENST00000428728 GPR153Q6NV75 609 aa20.19■□□□□ 0.82
TRIM39-209ENST00000428728 ARMCX2Q7L311 632 aa20.19■□□□□ 0.82
TRIM39-209ENST00000428728 SMC5Q8IY18 1101 aa20.19■□□□□ 0.82
TRIM39-209ENST00000428728 RWDD1Q9H446 243 aaPredicted RBP20.19■□□□□ 0.82
TRIM39-209ENST00000428728 MYADML2A6NDP7 307 aa20.18■□□□□ 0.82
TRIM39-209ENST00000428728 POTEB2H3BUK9 544 aa20.18■□□□□ 0.82
TRIM39-209ENST00000428728 ADCY6O43306 1168 aa20.18■□□□□ 0.82
TRIM39-209ENST00000428728 IRX5P78411 483 aaPredicted RBP20.18■□□□□ 0.82
TRIM39-209ENST00000428728 AAMPQ13685 434 aa20.18■□□□□ 0.82
TRIM39-209ENST00000428728 C1orf53Q5VUE5 145 aa20.18■□□□□ 0.82
TRIM39-209ENST00000428728 RCSD1Q6JBY9 416 aa20.18■□□□□ 0.82
TRIM39-209ENST00000428728 CCDC144CPQ8IYA2 1237 aa20.18■□□□□ 0.82
TRIM39-209ENST00000428728 BADQ92934 168 aa20.18■□□□□ 0.82
TRIM39-209ENST00000428728 TRERF1Q96PN7 1200 aa20.18■□□□□ 0.82
TRIM39-209ENST00000428728 A1CFQ9NQ94 594 aaKnown RBP20.18■□□□□ 0.82
TRIM39-209ENST00000428728 PRR12Q9ULL5 1215 aa20.18■□□□□ 0.82
TRIM39-209ENST00000428728 ZMYM6O95789 1325 aa20.18■□□□□ 0.82
TRIM39-209ENST00000428728 TRIM43BA6NCK2 446 aa20.17■□□□□ 0.82
TRIM39-209ENST00000428728 PQBP1O60828 265 aaKnown RBP20.17■□□□□ 0.82
TRIM39-209ENST00000428728 ACLYP53396 1101 aa20.17■□□□□ 0.82
TRIM39-209ENST00000428728 CCDC144BQ3MJ40 725 aa20.17■□□□□ 0.82
TRIM39-209ENST00000428728 EXOC6Q8TAG9 804 aa20.17■□□□□ 0.82
TRIM39-209ENST00000428728 TRIM43Q96BQ3 446 aaPredicted RBP20.17■□□□□ 0.82
TRIM39-209ENST00000428728 ABHD16BQ9H3Z7 469 aa20.17■□□□□ 0.82
TRIM39-209ENST00000428728 PLA2G6O60733 806 aa20.16■□□□□ 0.82
TRIM39-209ENST00000428728 DUSP11O75319 330 aaKnown RBP20.16■□□□□ 0.82
TRIM39-209ENST00000428728 IGHDP01880 384 aa20.16■□□□□ 0.82
TRIM39-209ENST00000428728 CLTBP09497 229 aa20.16■□□□□ 0.82
TRIM39-209ENST00000428728 FGRP09769 529 aa20.16■□□□□ 0.82
TRIM39-209ENST00000428728 C6orf222P0C671 652 aaPredicted RBP20.16■□□□□ 0.82
TRIM39-209ENST00000428728 TKFCQ3LXA3 575 aa20.16■□□□□ 0.82
TRIM39-209ENST00000428728 MUM1L1Q5H9M0 696 aa20.16■□□□□ 0.82
TRIM39-209ENST00000428728 CHD1LQ86WJ1 897 aa20.16■□□□□ 0.82
TRIM39-209ENST00000428728 FAM133AQ8N9E0 248 aa20.16■□□□□ 0.82
TRIM39-209ENST00000428728 DCAF4Q8WV16 495 aa20.16■□□□□ 0.82
TRIM39-209ENST00000428728 STARD7Q9NQZ5 370 aa20.16■□□□□ 0.82
TRIM39-209ENST00000428728 CCPG1Q9ULG6 757 aa20.16■□□□□ 0.82
TRIM39-209ENST00000428728 FRMPD2Q68DX3 1309 aaPredicted RBP20.16■□□□□ 0.82
TRIM39-209ENST00000428728 TOP1P11387 765 aaKnown RBP20.15■□□□□ 0.82
TRIM39-209ENST00000428728 SLC16A2P36021 539 aa20.15■□□□□ 0.82
TRIM39-209ENST00000428728 KCNA10Q16322 511 aa20.15■□□□□ 0.82
TRIM39-209ENST00000428728 C9orf50Q5SZB4 431 aa20.15■□□□□ 0.82
TRIM39-209ENST00000428728 TTBK2Q6IQ55 1244 aa20.15■□□□□ 0.82
TRIM39-209ENST00000428728 TBC1D10CQ8IV04 446 aa20.15■□□□□ 0.82
TRIM39-209ENST00000428728 PLEKHM2Q8IWE5 1019 aa20.15■□□□□ 0.82
TRIM39-209ENST00000428728 KLHDC9Q8NEP7 349 aa20.15■□□□□ 0.82
TRIM39-209ENST00000428728 TMEM47Q9BQJ4 181 aa20.15■□□□□ 0.82
TRIM39-209ENST00000428728 TSEN34Q9BSV6 310 aaKnown RBP20.15■□□□□ 0.82
TRIM39-209ENST00000428728 SOWAHBA6NEL2 793 aa20.14■□□□□ 0.81
TRIM39-209ENST00000428728 MOXD2PA6NHM9 499 aa20.14■□□□□ 0.81
TRIM39-209ENST00000428728 SDSP20132 328 aa20.14■□□□□ 0.81
TRIM39-209ENST00000428728 NOVP48745 357 aa20.14■□□□□ 0.81
TRIM39-209ENST00000428728 SHHQ15465 462 aa20.14■□□□□ 0.81
TRIM39-209ENST00000428728 NSMFQ6X4W1 530 aa20.14■□□□□ 0.81
TRIM39-209ENST00000428728 TICAM2Q86XR7 235 aa20.14■□□□□ 0.81
TRIM39-209ENST00000428728 NUP133Q8WUM0 1156 aa20.14■□□□□ 0.81
TRIM39-209ENST00000428728 KATNBL1Q9H079 304 aa20.14■□□□□ 0.81
TRIM39-209ENST00000428728 SPC25Q9HBM1 224 aa20.14■□□□□ 0.81
TRIM39-209ENST00000428728 GPCPD1Q9NPB8 672 aa20.14■□□□□ 0.81
TRIM39-209ENST00000428728 MTMR10Q9NXD2 777 aa20.14■□□□□ 0.81
TRIM39-209ENST00000428728 DDX49Q9Y6V7 483 aaKnown RBP20.14■□□□□ 0.81
TRIM39-209ENST00000428728 ASTN1O14525 1302 aa20.13■□□□□ 0.81
TRIM39-209ENST00000428728 NEDD4P46934 1319 aa20.13■□□□□ 0.81
TRIM39-209ENST00000428728 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.13■□□□□ 0.81
TRIM39-209ENST00000428728 ITGB8P26012 769 aa20.13■□□□□ 0.81
TRIM39-209ENST00000428728 CST5P28325 142 aaPredicted RBP20.13■□□□□ 0.81
TRIM39-209ENST00000428728 MFAP1P55081 439 aaKnown RBP20.13■□□□□ 0.81
TRIM39-209ENST00000428728 NUCB1Q02818 461 aa20.13■□□□□ 0.81
TRIM39-209ENST00000428728 AKNAD1Q5T1N1 836 aa20.13■□□□□ 0.81
TRIM39-209ENST00000428728 SYDE2Q5VT97 1194 aa20.13■□□□□ 0.81
TRIM39-209ENST00000428728 CCSAPQ6IQ19 270 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms