RNA–Protein interactions for RNA: ENST00000428683.5

ZNF3-208, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-208ENST00000428683 MSL3Q8N5Y2 521 aaKnown RBP12.16□□□□□ -0.46
ZNF3-208ENST00000428683 TRERF1Q96PN7 1200 aa12.16□□□□□ -0.46
ZNF3-208ENST00000428683 RNF146Q9NTX7 359 aa12.16□□□□□ -0.46
ZNF3-208ENST00000428683 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.16□□□□□ -0.46
ZNF3-208ENST00000428683 PRR12Q9ULL5 1215 aa12.16□□□□□ -0.46
ZNF3-208ENST00000428683 PHF24Q9UPV7 400 aa12.16□□□□□ -0.46
ZNF3-208ENST00000428683 PLIN4Q96Q06 1357 aa12.16□□□□□ -0.46
ZNF3-208ENST00000428683 ZNF236Q9UL36 1845 aa12.16□□□□□ -0.46
ZNF3-208ENST00000428683 GREB1LQ9C091 1923 aaPredicted RBP12.15□□□□□ -0.46
ZNF3-208ENST00000428683 ZNF536O15090 1300 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 SYNGAP1Q96PV0 1343 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 TRIM43BA6NCK2 446 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 POTEB2H3BUK9 544 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 ORC4O43929 436 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 ADAMTS4O75173 837 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 FGRP09769 529 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 SDSP20132 328 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 SLC16A2P36021 539 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 KCNA10Q16322 511 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 CCDC96Q2M329 555 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 TTBK2Q6IQ55 1244 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 ARMCX2Q7L311 632 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 CHD1LQ86WJ1 897 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 PLEKHM2Q8IWE5 1019 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 CCDC144CPQ8IYA2 1237 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 DEFB123Q8N688 67 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 BADQ92934 168 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 TRIM43Q96BQ3 446 aaPredicted RBP12.15□□□□□ -0.46
ZNF3-208ENST00000428683 FGD4Q96M96 766 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 ACAD9Q9H845 621 aa12.15□□□□□ -0.46
ZNF3-208ENST00000428683 COL11A1P12107 1806 aaPredicted RBP12.15□□□□□ -0.46
ZNF3-208ENST00000428683 PARP14Q460N5 1801 aa12.14□□□□□ -0.47
ZNF3-208ENST00000428683 ZNFX1Q9P2E3 1918 aaKnown RBP12.14□□□□□ -0.47
ZNF3-208ENST00000428683 A0A1W2PQ45 241 aaPredicted RBP12.14□□□□□ -0.47
ZNF3-208ENST00000428683 A0A1W2PQY0 241 aa12.14□□□□□ -0.47
ZNF3-208ENST00000428683 MYADML2A6NDP7 307 aa12.14□□□□□ -0.47
ZNF3-208ENST00000428683 SOWAHBA6NEL2 793 aa12.14□□□□□ -0.47
ZNF3-208ENST00000428683 PQBP1O60828 265 aaKnown RBP12.14□□□□□ -0.47
ZNF3-208ENST00000428683 ACLYP53396 1101 aa12.14□□□□□ -0.47
ZNF3-208ENST00000428683 AAMPQ13685 434 aa12.14□□□□□ -0.47
ZNF3-208ENST00000428683 SNX17Q15036 470 aa12.14□□□□□ -0.47
ZNF3-208ENST00000428683 CCDC144BQ3MJ40 725 aa12.14□□□□□ -0.47
ZNF3-208ENST00000428683 MUM1L1Q5H9M0 696 aa12.14□□□□□ -0.47
ZNF3-208ENST00000428683 ZNF467Q7Z7K2 595 aaPredicted RBP12.14□□□□□ -0.47
ZNF3-208ENST00000428683 VTI1AQ96AJ9 217 aa12.14□□□□□ -0.47
ZNF3-208ENST00000428683 TMEM47Q9BQJ4 181 aa12.14□□□□□ -0.47
ZNF3-208ENST00000428683 ABHD16BQ9H3Z7 469 aa12.14□□□□□ -0.47
ZNF3-208ENST00000428683 GPCPD1Q9NPB8 672 aa12.14□□□□□ -0.47
ZNF3-208ENST00000428683 A1CFQ9NQ94 594 aaKnown RBP12.14□□□□□ -0.47
ZNF3-208ENST00000428683 PDLIM7Q9NR12 457 aa12.14□□□□□ -0.47
ZNF3-208ENST00000428683 DDX49Q9Y6V7 483 aaKnown RBP12.14□□□□□ -0.47
ZNF3-208ENST00000428683 SZT2Q5T011 3432 aa12.14□□□□□ -0.47
ZNF3-208ENST00000428683 FRMPD2Q68DX3 1309 aaPredicted RBP12.13□□□□□ -0.47
ZNF3-208ENST00000428683 CCDC171Q6TFL3 1326 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 SYNRGQ9UMZ2 1314 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 ADCY6O43306 1168 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 PLA2G6O60733 806 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 DUSP11O75319 330 aaKnown RBP12.13□□□□□ -0.47
ZNF3-208ENST00000428683 C6orf222P0C671 652 aaPredicted RBP12.13□□□□□ -0.47
ZNF3-208ENST00000428683 TOP1P11387 765 aaKnown RBP12.13□□□□□ -0.47
ZNF3-208ENST00000428683 ITGB8P26012 769 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 NOVP48745 357 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 NUCB1Q02818 461 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 SHHQ15465 462 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 TKFCQ3LXA3 575 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 C9orf50Q5SZB4 431 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 C1orf53Q5VUE5 145 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 CWC27Q6UX04 472 aaKnown RBP12.13□□□□□ -0.47
ZNF3-208ENST00000428683 NSMFQ6X4W1 530 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 MFSD6Q6ZSS7 791 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 NOL8Q76FK4 1167 aaKnown RBP12.13□□□□□ -0.47
ZNF3-208ENST00000428683 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.13□□□□□ -0.47
ZNF3-208ENST00000428683 EEPD1Q7L9B9 569 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 FAM133AQ8N9E0 248 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 KLHDC9Q8NEP7 349 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 DCAF4Q8WV16 495 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 PURBQ96QR8 312 aaKnown RBP12.13□□□□□ -0.47
ZNF3-208ENST00000428683 TSEN34Q9BSV6 310 aaKnown RBP12.13□□□□□ -0.47
ZNF3-208ENST00000428683 STARD7Q9NQZ5 370 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 CCPG1Q9ULG6 757 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 SMCHD1A6NHR9 2005 aa12.13□□□□□ -0.47
ZNF3-208ENST00000428683 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.12□□□□□ -0.47
ZNF3-208ENST00000428683 CLTBP09497 229 aa12.12□□□□□ -0.47
ZNF3-208ENST00000428683 GNASQ5JWF2 1037 aa12.12□□□□□ -0.47
ZNF3-208ENST00000428683 AKNAD1Q5T1N1 836 aa12.12□□□□□ -0.47
ZNF3-208ENST00000428683 CCSAPQ6IQ19 270 aaPredicted RBP12.12□□□□□ -0.47
ZNF3-208ENST00000428683 GPR153Q6NV75 609 aa12.12□□□□□ -0.47
ZNF3-208ENST00000428683 NUP133Q8WUM0 1156 aa12.12□□□□□ -0.47
ZNF3-208ENST00000428683 ZKSCAN3Q9BRR0 538 aa12.12□□□□□ -0.47
ZNF3-208ENST00000428683 SPC25Q9HBM1 224 aa12.12□□□□□ -0.47
ZNF3-208ENST00000428683 TCP11L1Q9NUJ3 509 aa12.12□□□□□ -0.47
ZNF3-208ENST00000428683 TMEM39AQ9NV64 488 aa12.12□□□□□ -0.47
ZNF3-208ENST00000428683 SUPT16HQ9Y5B9 1047 aaKnown RBP12.12□□□□□ -0.47
ZNF3-208ENST00000428683 FRMPD3Q5JV73 1810 aa12.11□□□□□ -0.47
ZNF3-208ENST00000428683 MOXD2PA6NHM9 499 aa12.11□□□□□ -0.47
ZNF3-208ENST00000428683 ZNF213O14771 459 aa12.11□□□□□ -0.47
ZNF3-208ENST00000428683 ASGR1P07306 291 aa12.11□□□□□ -0.47
ZNF3-208ENST00000428683 RAG1P15918 1043 aa12.11□□□□□ -0.47
ZNF3-208ENST00000428683 PTGS1P23219 599 aa12.11□□□□□ -0.47
ZNF3-208ENST00000428683 MFAP1P55081 439 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms