RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 IFFO2Q5TF58 517 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 RGMBQ6NW40 437 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 GADL1Q6ZQY3 521 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 HEATR3Q7Z4Q2 680 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 RASAL3Q86YV0 1011 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 REPS2Q8NFH8 660 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 GPKOWQ92917 476 aaPredicted RBP eCLIP14.41□□□□□ -0.1
TRIM39-207ENST00000428404 HOXC10Q9NYD6 342 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 KCNJ14Q9UNX9 436 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 ZNF536O15090 1300 aa14.41□□□□□ -0.1
TRIM39-207ENST00000428404 LOC285556D6RIA3 1793 aa14.4□□□□□ -0.1
TRIM39-207ENST00000428404 ESYT2A0FGR8 921 aa14.4□□□□□ -0.1
TRIM39-207ENST00000428404 U2AF2P26368 475 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRIM39-207ENST00000428404 ZNF157P51786 506 aaPredicted RBP14.4□□□□□ -0.1
TRIM39-207ENST00000428404 RESTQ13127 1097 aa14.4□□□□□ -0.1
TRIM39-207ENST00000428404 GALNT17Q6IS24 598 aa14.4□□□□□ -0.1
TRIM39-207ENST00000428404 PPP1R18Q6NYC8 613 aa14.4□□□□□ -0.1
TRIM39-207ENST00000428404 POTEEQ6S8J3 1075 aa14.4□□□□□ -0.1
TRIM39-207ENST00000428404 LBX2Q6XYB7 198 aa14.4□□□□□ -0.1
TRIM39-207ENST00000428404 FBXO11Q86XK2 927 aa14.4□□□□□ -0.1
TRIM39-207ENST00000428404 BRI3BPQ8WY22 251 aa14.4□□□□□ -0.1
TRIM39-207ENST00000428404 COA7Q96BR5 231 aa14.4□□□□□ -0.1
TRIM39-207ENST00000428404 AMNQ9BXJ7 453 aa14.4□□□□□ -0.1
TRIM39-207ENST00000428404 ZMYND12Q9H0C1 365 aa14.4□□□□□ -0.1
TRIM39-207ENST00000428404 SLC45A1Q9Y2W3 748 aa14.4□□□□□ -0.1
TRIM39-207ENST00000428404 RLFQ13129 1914 aa14.4□□□□□ -0.1
TRIM39-207ENST00000428404 SPDYE16A6NNV3 312 aaPredicted RBP14.39□□□□□ -0.11
TRIM39-207ENST00000428404 FAM155AB1AL88 458 aaPredicted RBP14.39□□□□□ -0.11
TRIM39-207ENST00000428404 ATP2A1O14983 1001 aa14.39□□□□□ -0.11
TRIM39-207ENST00000428404 F13A1P00488 732 aa14.39□□□□□ -0.11
TRIM39-207ENST00000428404 SLC10A3P09131 477 aa14.39□□□□□ -0.11
TRIM39-207ENST00000428404 CALML3P27482 149 aa14.39□□□□□ -0.11
TRIM39-207ENST00000428404 KIF23Q02241 960 aaPredicted RBP14.39□□□□□ -0.11
TRIM39-207ENST00000428404 TRAF1Q13077 416 aa14.39□□□□□ -0.11
TRIM39-207ENST00000428404 DAGLBQ8NCG7 672 aa14.39□□□□□ -0.11
TRIM39-207ENST00000428404 CCDC148Q8NFR7 591 aa14.39□□□□□ -0.11
TRIM39-207ENST00000428404 CCDC12Q8WUD4 166 aaPredicted RBP14.39□□□□□ -0.11
TRIM39-207ENST00000428404 CCDC102AQ96A19 550 aa14.39□□□□□ -0.11
TRIM39-207ENST00000428404 ATG4CQ96DT6 458 aa14.39□□□□□ -0.11
TRIM39-207ENST00000428404 P2RX7Q99572 595 aaKnown RBP14.39□□□□□ -0.11
TRIM39-207ENST00000428404 ASCC2Q9H1I8 757 aaPredicted RBP14.39□□□□□ -0.11
TRIM39-207ENST00000428404 PCDHA1Q9Y5I3 950 aa14.39□□□□□ -0.11
TRIM39-207ENST00000428404 MYH6P13533 1939 aa14.39□□□□□ -0.11
TRIM39-207ENST00000428404 CCL15-CCL14A0A0B4J2E2 113 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 KIF28PB7ZC32 967 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 M0R2N6 131 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 ADAMTS3O15072 1205 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 ZBED4O75132 1171 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 ICAM1P05362 532 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 OAZ1P54368 228 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 NAPAP54920 295 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 NLRP5P59047 1200 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 PABPC4Q13310 644 aaKnown RBP eCLIP14.38□□□□□ -0.11
TRIM39-207ENST00000428404 CCL15Q16663 113 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 FOXD4L5Q5VV16 416 aaPredicted RBP14.38□□□□□ -0.11
TRIM39-207ENST00000428404 CLEC17AQ6ZS10 378 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 ANKRD23Q86SG2 305 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 DIS3L2Q8IYB7 885 aaKnown RBP14.38□□□□□ -0.11
TRIM39-207ENST00000428404 OXER1Q8TDS5 423 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 FOXD4L4Q8WXT5 416 aaPredicted RBP14.38□□□□□ -0.11
TRIM39-207ENST00000428404 TNPO1Q92973 898 aaKnown RBP14.38□□□□□ -0.11
TRIM39-207ENST00000428404 TNFRSF25Q93038 417 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 PTPN18Q99952 460 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 FOXP1Q9H334 677 aaPredicted RBP14.38□□□□□ -0.11
TRIM39-207ENST00000428404 ZSCAN16Q9H4T2 348 aaPredicted RBP14.38□□□□□ -0.11
TRIM39-207ENST00000428404 PNMA2Q9UL42 364 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 PCDHA4Q9UN74 947 aa14.38□□□□□ -0.11
TRIM39-207ENST00000428404 SMCO2A6NFE2 343 aa14.37□□□□□ -0.11
TRIM39-207ENST00000428404 BTBD18B2RXH4 712 aa14.37□□□□□ -0.11
TRIM39-207ENST00000428404 BTBD19C9JJ37 291 aa14.37□□□□□ -0.11
TRIM39-207ENST00000428404 APLP1P51693 650 aa14.37□□□□□ -0.11
TRIM39-207ENST00000428404 MKRN3Q13064 507 aaKnown RBP14.37□□□□□ -0.11
TRIM39-207ENST00000428404 SAFBQ15424 915 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRIM39-207ENST00000428404 CCDC174Q6PII3 467 aa14.37□□□□□ -0.11
TRIM39-207ENST00000428404 BRAPQ7Z569 592 aa14.37□□□□□ -0.11
TRIM39-207ENST00000428404 FERMT3Q86UX7 667 aa14.37□□□□□ -0.11
TRIM39-207ENST00000428404 TEX2Q8IWB9 1127 aa14.37□□□□□ -0.11
TRIM39-207ENST00000428404 MB21D1Q8N884 522 aa14.37□□□□□ -0.11
TRIM39-207ENST00000428404 AGBL1Q96MI9 1066 aa14.37□□□□□ -0.11
TRIM39-207ENST00000428404 RIC8AQ9NPQ8 531 aa14.37□□□□□ -0.11
TRIM39-207ENST00000428404 CREBZFQ9NS37 354 aa14.37□□□□□ -0.11
TRIM39-207ENST00000428404 ABT1Q9ULW3 272 aaKnown RBP14.37□□□□□ -0.11
TRIM39-207ENST00000428404 PARP14Q460N5 1801 aa14.36□□□□□ -0.11
TRIM39-207ENST00000428404 MANSC4A6NHS7 340 aaPredicted RBP14.36□□□□□ -0.11
TRIM39-207ENST00000428404 OPLAHO14841 1288 aa14.36□□□□□ -0.11
TRIM39-207ENST00000428404 OSBPP22059 807 aa14.36□□□□□ -0.11
TRIM39-207ENST00000428404 GNA11P29992 359 aa14.36□□□□□ -0.11
TRIM39-207ENST00000428404 KRT2P35908 639 aa14.36□□□□□ -0.11
TRIM39-207ENST00000428404 HERVK_113P62684 666 aa14.36□□□□□ -0.11
TRIM39-207ENST00000428404 IRX3P78415 501 aaPredicted RBP14.36□□□□□ -0.11
TRIM39-207ENST00000428404 NR5A1Q13285 461 aa14.36□□□□□ -0.11
TRIM39-207ENST00000428404 TMEM132BQ14DG7 1078 aa14.36□□□□□ -0.11
TRIM39-207ENST00000428404 MCTP1Q6DN14 999 aa14.36□□□□□ -0.11
TRIM39-207ENST00000428404 SAMD1Q6SPF0 538 aaPredicted RBP14.36□□□□□ -0.11
TRIM39-207ENST00000428404 NOSTRINQ8IVI9 506 aa14.36□□□□□ -0.11
TRIM39-207ENST00000428404 BLIDQ8IZY5 108 aa14.36□□□□□ -0.11
TRIM39-207ENST00000428404 GLT8D2Q9H1C3 349 aa14.36□□□□□ -0.11
TRIM39-207ENST00000428404 RAVER2Q9HCJ3 691 aaKnown RBP14.36□□□□□ -0.11
TRIM39-207ENST00000428404 C6orf50Q9HD87 102 aa14.36□□□□□ -0.11
TRIM39-207ENST00000428404 ZNF214Q9UL59 606 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms