RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 NEK8Q86SG6 692 aa19.58■□□□□ 0.72
PRDM5-203ENST00000428209 ADGRF4Q8IZF3 695 aa19.58■□□□□ 0.72
PRDM5-203ENST00000428209 TTLL6Q8N841 843 aa19.58■□□□□ 0.72
PRDM5-203ENST00000428209 JMJD4Q9H9V9 463 aa19.58■□□□□ 0.72
PRDM5-203ENST00000428209 NFE2L3Q9Y4A8 694 aa19.58■□□□□ 0.72
PRDM5-203ENST00000428209 CFAP100Q494V2 611 aa19.57■□□□□ 0.72
PRDM5-203ENST00000428209 TRMT44Q8IYL2 757 aaKnown RBP19.57■□□□□ 0.72
PRDM5-203ENST00000428209 ZNF646O15015 1829 aaPredicted RBP19.57■□□□□ 0.72
PRDM5-203ENST00000428209 MYH4Q9Y623 1939 aa19.57■□□□□ 0.72
PRDM5-203ENST00000428209 PNMA6FA0A0J9YX94 578 aa19.57■□□□□ 0.72
PRDM5-203ENST00000428209 ERCC5P28715 1186 aaPredicted RBP19.57■□□□□ 0.72
PRDM5-203ENST00000428209 PRPHP41219 470 aa19.57■□□□□ 0.72
PRDM5-203ENST00000428209 KARSQ15046 597 aaKnown RBP19.57■□□□□ 0.72
PRDM5-203ENST00000428209 KCTD1Q719H9 257 aa19.57■□□□□ 0.72
PRDM5-203ENST00000428209 TBCKQ8TEA7 893 aa19.57■□□□□ 0.72
PRDM5-203ENST00000428209 BLZF1Q9H2G9 400 aa19.57■□□□□ 0.72
PRDM5-203ENST00000428209 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.57■□□□□ 0.72
PRDM5-203ENST00000428209 RAD21O60216 631 aa19.56■□□□□ 0.72
PRDM5-203ENST00000428209 SLC16A2P36021 539 aa19.56■□□□□ 0.72
PRDM5-203ENST00000428209 STAT6P42226 847 aa19.56■□□□□ 0.72
PRDM5-203ENST00000428209 TERF1P54274 439 aa19.56■□□□□ 0.72
PRDM5-203ENST00000428209 HSP90AA4PQ58FG1 418 aa19.56■□□□□ 0.72
PRDM5-203ENST00000428209 RASSF8Q8NHQ8 419 aa19.56■□□□□ 0.72
PRDM5-203ENST00000428209 DPF2Q92785 391 aa19.56■□□□□ 0.72
PRDM5-203ENST00000428209 PRMT6Q96LA8 375 aaPredicted RBP19.56■□□□□ 0.72
PRDM5-203ENST00000428209 KANSL2Q9H9L4 492 aa19.56■□□□□ 0.72
PRDM5-203ENST00000428209 TMEM260Q9NX78 707 aa19.56■□□□□ 0.72
PRDM5-203ENST00000428209 GREB1LQ9C091 1923 aaPredicted RBP19.56■□□□□ 0.72
PRDM5-203ENST00000428209 SKILP12757 684 aa19.56■□□□□ 0.72
PRDM5-203ENST00000428209 EEF2P13639 858 aaKnown RBP19.56■□□□□ 0.72
PRDM5-203ENST00000428209 CDK11BP21127 795 aaKnown RBP19.56■□□□□ 0.72
PRDM5-203ENST00000428209 UBA7P41226 1012 aa19.56■□□□□ 0.72
PRDM5-203ENST00000428209 ADCY7P51828 1080 aa19.56■□□□□ 0.72
PRDM5-203ENST00000428209 SHROOM1Q2M3G4 852 aaPredicted RBP19.56■□□□□ 0.72
PRDM5-203ENST00000428209 CCDC93Q567U6 631 aa19.56■□□□□ 0.72
PRDM5-203ENST00000428209 DEFB132Q7Z7B7 95 aa19.56■□□□□ 0.72
PRDM5-203ENST00000428209 DISC1Q9NRI5 854 aa19.56■□□□□ 0.72
PRDM5-203ENST00000428209 PP2D1A8MPX8 630 aa19.55■□□□□ 0.72
PRDM5-203ENST00000428209 GRIPAP1Q4V328 841 aa19.55■□□□□ 0.72
PRDM5-203ENST00000428209 CT47A1Q5JQC4 288 aaPredicted RBP19.55■□□□□ 0.72
PRDM5-203ENST00000428209 TATDN1Q6P1N9 297 aa19.55■□□□□ 0.72
PRDM5-203ENST00000428209 RTKN2Q8IZC4 609 aa19.55■□□□□ 0.72
PRDM5-203ENST00000428209 MTRQ99707 1265 aa19.55■□□□□ 0.72
PRDM5-203ENST00000428209 SIPA1L1O43166 1804 aa19.55■□□□□ 0.72
PRDM5-203ENST00000428209 GTPBP6O43824 516 aaPredicted RBP19.54■□□□□ 0.72
PRDM5-203ENST00000428209 OR52Z1P0C646 297 aa19.54■□□□□ 0.72
PRDM5-203ENST00000428209 RRAGBQ5VZM2 374 aa19.54■□□□□ 0.72
PRDM5-203ENST00000428209 KLHL10Q6JEL2 608 aa19.54■□□□□ 0.72
PRDM5-203ENST00000428209 MED15Q96RN5 788 aa19.54■□□□□ 0.72
PRDM5-203ENST00000428209 NYAP2Q9P242 653 aa19.54■□□□□ 0.72
PRDM5-203ENST00000428209 CUL4BQ13620 913 aa19.54■□□□□ 0.72
PRDM5-203ENST00000428209 MKL1Q969V6 931 aa19.54■□□□□ 0.72
PRDM5-203ENST00000428209 USP17L10C9JJH3 530 aa19.53■□□□□ 0.72
PRDM5-203ENST00000428209 ENTPD3O75355 529 aa19.53■□□□□ 0.72
PRDM5-203ENST00000428209 CD44P16070 742 aaKnown RBP19.53■□□□□ 0.72
PRDM5-203ENST00000428209 ZNF18P17022 549 aa19.53■□□□□ 0.72
PRDM5-203ENST00000428209 CCZ1BP86790 482 aa19.53■□□□□ 0.72
PRDM5-203ENST00000428209 CCZ1P86791 482 aaPredicted RBP19.53■□□□□ 0.72
PRDM5-203ENST00000428209 SEPT2Q15019 361 aa19.53■□□□□ 0.72
PRDM5-203ENST00000428209 CCSER1Q9C0I3 900 aa19.53■□□□□ 0.72
PRDM5-203ENST00000428209 ZBTB5O15062 677 aa19.53■□□□□ 0.72
PRDM5-203ENST00000428209 PPP1R11O60927 126 aaPredicted RBP19.53■□□□□ 0.72
PRDM5-203ENST00000428209 PPP1R18Q6NYC8 613 aa19.53■□□□□ 0.72
PRDM5-203ENST00000428209 SMYD4Q8IYR2 804 aaPredicted RBP19.53■□□□□ 0.72
PRDM5-203ENST00000428209 CCDC150Q8NCX0 1101 aa19.53■□□□□ 0.72
PRDM5-203ENST00000428209 SAMSN1Q9NSI8 373 aaKnown RBP19.53■□□□□ 0.72
PRDM5-203ENST00000428209 RAD17O75943 681 aa19.52■□□□□ 0.72
PRDM5-203ENST00000428209 GDF11O95390 407 aa19.52■□□□□ 0.72
PRDM5-203ENST00000428209 SLC1A4P43007 532 aa19.52■□□□□ 0.72
PRDM5-203ENST00000428209 ABCB5Q2M3G0 1257 aa19.52■□□□□ 0.72
PRDM5-203ENST00000428209 TMEM179Q6ZVK1 233 aa19.52■□□□□ 0.72
PRDM5-203ENST00000428209 LARGE2Q8N3Y3 721 aa19.52■□□□□ 0.72
PRDM5-203ENST00000428209 AK8Q96MA6 479 aa19.52■□□□□ 0.72
PRDM5-203ENST00000428209 TPM2P07951 284 aa19.52■□□□□ 0.71
PRDM5-203ENST00000428209 DPEP1P16444 411 aa19.52■□□□□ 0.71
PRDM5-203ENST00000428209 SFPQP23246 707 aaKnown RBP eCLIP19.52■□□□□ 0.71
PRDM5-203ENST00000428209 STX17P56962 302 aa19.52■□□□□ 0.71
PRDM5-203ENST00000428209 ICA1Q05084 483 aa19.52■□□□□ 0.71
PRDM5-203ENST00000428209 ORC2Q13416 577 aaPredicted RBP19.52■□□□□ 0.71
PRDM5-203ENST00000428209 DHX8Q14562 1220 aaKnown RBP19.52■□□□□ 0.71
PRDM5-203ENST00000428209 SLFN13Q68D06 897 aa19.52■□□□□ 0.71
PRDM5-203ENST00000428209 ARMCX5Q6P1M9 558 aa19.52■□□□□ 0.71
PRDM5-203ENST00000428209 RSBN1LQ6PCB5 846 aaPredicted RBP19.52■□□□□ 0.71
PRDM5-203ENST00000428209 PSMD1Q99460 953 aa19.52■□□□□ 0.71
PRDM5-203ENST00000428209 PLIN2Q99541 437 aa19.52■□□□□ 0.71
PRDM5-203ENST00000428209 RIC8AQ9NPQ8 531 aa19.52■□□□□ 0.71
PRDM5-203ENST00000428209 PPP1R3GB7ZBB8 358 aa19.51■□□□□ 0.71
PRDM5-203ENST00000428209 NAALADL2Q58DX5 795 aa19.51■□□□□ 0.71
PRDM5-203ENST00000428209 SPATA1Q5VX52 437 aa19.51■□□□□ 0.71
PRDM5-203ENST00000428209 SIAH1Q8IUQ4 282 aa19.51■□□□□ 0.71
PRDM5-203ENST00000428209 DCAF4Q8WV16 495 aa19.51■□□□□ 0.71
PRDM5-203ENST00000428209 UPF1Q92900 1129 aaKnown RBP eCLIP19.51■□□□□ 0.71
PRDM5-203ENST00000428209 MTMR8Q96EF0 704 aa19.51■□□□□ 0.71
PRDM5-203ENST00000428209 CSRNP1Q96S65 589 aa19.51■□□□□ 0.71
PRDM5-203ENST00000428209 ZNF277Q9NRM2 450 aaPredicted RBP19.51■□□□□ 0.71
PRDM5-203ENST00000428209 ATRNL1Q5VV63 1379 aa19.51■□□□□ 0.71
PRDM5-203ENST00000428209 SYNRGQ9UMZ2 1314 aa19.51■□□□□ 0.71
PRDM5-203ENST00000428209 TMEM232C9JQI7 657 aa19.51■□□□□ 0.71
PRDM5-203ENST00000428209 RPN1P04843 607 aaKnown RBP19.51■□□□□ 0.71
PRDM5-203ENST00000428209 TECP42680 631 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms