RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 ACRBPQ8NEB7 543 aa13.12□□□□□ -0.31
FIRRE-201ENST00000427391 HPS3Q969F9 1004 aa13.12□□□□□ -0.31
FIRRE-201ENST00000427391 UIMC1Q96RL1 719 aa13.12□□□□□ -0.31
FIRRE-201ENST00000427391 ZSWIM4Q9H7M6 989 aa13.12□□□□□ -0.31
FIRRE-201ENST00000427391 ST7Q9NRC1 585 aa13.12□□□□□ -0.31
FIRRE-201ENST00000427391 SMCO2A6NFE2 343 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 CCP110O43303 1012 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 PARP1P09874 1014 aaKnown RBP13.11□□□□□ -0.31
FIRRE-201ENST00000427391 RXRBP28702 533 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 ARL6IP4Q66PJ3 421 aaKnown RBP13.11□□□□□ -0.31
FIRRE-201ENST00000427391 IRF2BP1Q8IU81 584 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 SH3GLB2Q9NR46 395 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 DDX41Q9UJV9 622 aaKnown RBP13.11□□□□□ -0.31
FIRRE-201ENST00000427391 KCNJ18B7U540 433 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 NKRFO15226 690 aaKnown RBP eCLIP13.11□□□□□ -0.31
FIRRE-201ENST00000427391 MFAP3LO75121 409 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 TRIM37O94972 964 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 TXLNAP40222 546 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 GNAQP50148 359 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 COPB1P53618 953 aaKnown RBP13.11□□□□□ -0.31
FIRRE-201ENST00000427391 KCNJ12Q14500 433 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 TXNRD1Q16881 649 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 CRY2Q49AN0 593 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 ZNF658Q5TYW1 1059 aaPredicted RBP13.11□□□□□ -0.31
FIRRE-201ENST00000427391 FCHSD1Q86WN1 690 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 COA7Q96BR5 231 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 DAGLAQ9Y4D2 1042 aa13.11□□□□□ -0.31
FIRRE-201ENST00000427391 DDX60LQ5H9U9 1706 aaKnown RBP13.11□□□□□ -0.31
FIRRE-201ENST00000427391 MYH8P13535 1937 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 IL1R1P14778 569 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 PLCG1P19174 1290 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 CASQ1P31415 396 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 SCNN1DP51172 638 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 ST5P78524 1137 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 MNS1Q8NEH6 495 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 KIFC2Q96AC6 838 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 TCP11L1Q9NUJ3 509 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 RWDD2AQ9UIY3 292 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 ADGRG1Q9Y653 693 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 CDK5RAP2Q96SN8 1893 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 KLRC4O43908 158 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 TECP42680 631 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 FILIP1LQ4L180 1135 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 TCP11X2Q5H9J9 407 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 CCDC148Q8NFR7 591 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 NEDD1Q8NHV4 660 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 ZBTB9Q96C00 473 aa13.1□□□□□ -0.31
FIRRE-201ENST00000427391 DDX4Q9NQI0 724 aaKnown RBP13.1□□□□□ -0.31
FIRRE-201ENST00000427391 ATP2B4P23634 1241 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 CLCN6P51797 869 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 ERVK-24P63145 666 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 DOK7Q18PE1 504 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 CCDC12Q8WUD4 166 aaPredicted RBP13.09□□□□□ -0.31
FIRRE-201ENST00000427391 RBM17Q96I25 401 aaKnown RBP13.09□□□□□ -0.31
FIRRE-201ENST00000427391 GPCPD1Q9NPB8 672 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 THSD7AQ9UPZ6 1657 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 TADA3O75528 432 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 AKR1B1P15121 316 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 POTEDQ86YR6 584 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 SMAP1Q8IYB5 467 aaPredicted RBP13.09□□□□□ -0.31
FIRRE-201ENST00000427391 CERS5Q8N5B7 392 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 TBCKQ8TEA7 893 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 GJA10Q969M2 543 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 PANX2Q96RD6 677 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 NUP88Q99567 741 aaPredicted RBP13.09□□□□□ -0.31
FIRRE-201ENST00000427391 OGFRQ9NZT2 677 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 LIMA1Q9UHB6 759 aaKnown RBP13.09□□□□□ -0.31
FIRRE-201ENST00000427391 LY75O60449 1722 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 UBXN1Q04323 297 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 DPP8Q6V1X1 898 aaPredicted RBP13.09□□□□□ -0.31
FIRRE-201ENST00000427391 ADSSL1Q8N142 457 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 UBXN4Q92575 508 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 CTAGE1Q96RT6 745 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 ZMYND12Q9H0C1 365 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 TFR2Q9UP52 801 aa13.09□□□□□ -0.31
FIRRE-201ENST00000427391 SEC31AO94979 1220 aaKnown RBP13.08□□□□□ -0.32
FIRRE-201ENST00000427391 CCDC175P0C221 793 aa13.08□□□□□ -0.32
FIRRE-201ENST00000427391 FCER1AP12319 257 aa13.08□□□□□ -0.32
FIRRE-201ENST00000427391 SHROOM1Q2M3G4 852 aaPredicted RBP13.08□□□□□ -0.32
FIRRE-201ENST00000427391 ZNF772Q68DY9 489 aaPredicted RBP13.08□□□□□ -0.32
FIRRE-201ENST00000427391 C15orf52Q6ZUT6 534 aaKnown RBP13.08□□□□□ -0.32
FIRRE-201ENST00000427391 CABP7Q86V35 215 aa13.08□□□□□ -0.32
FIRRE-201ENST00000427391 DAGLBQ8NCG7 672 aa13.08□□□□□ -0.32
FIRRE-201ENST00000427391 RRP36Q96EU6 259 aaKnown RBP13.08□□□□□ -0.32
FIRRE-201ENST00000427391 FEZ1Q99689 392 aa13.08□□□□□ -0.32
FIRRE-201ENST00000427391 SPZ1Q9BXG8 430 aa13.08□□□□□ -0.32
FIRRE-201ENST00000427391 SRRTQ9BXP5 876 aaKnown RBP13.08□□□□□ -0.32
FIRRE-201ENST00000427391 H2AFXP16104 143 aaPredicted RBP13.08□□□□□ -0.32
FIRRE-201ENST00000427391 TXKP42681 527 aa13.08□□□□□ -0.32
FIRRE-201ENST00000427391 ATP2B2Q01814 1243 aa13.08□□□□□ -0.32
FIRRE-201ENST00000427391 NONOQ15233 471 aaKnown RBP eCLIP13.08□□□□□ -0.32
FIRRE-201ENST00000427391 CCDC178Q5BJE1 867 aa13.08□□□□□ -0.32
FIRRE-201ENST00000427391 TEX35Q5T0J7 233 aa13.08□□□□□ -0.32
FIRRE-201ENST00000427391 GPIHBP1Q8IV16 184 aa13.08□□□□□ -0.32
FIRRE-201ENST00000427391 CHP1Q99653 195 aa13.08□□□□□ -0.32
FIRRE-201ENST00000427391 PCDHAC2Q9Y5I4 1007 aa13.08□□□□□ -0.32
FIRRE-201ENST00000427391 FAM196BA6NMK8 535 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 OR52Z1P0C646 297 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 ERCC3P19447 782 aa13.07□□□□□ -0.32
FIRRE-201ENST00000427391 TTBK2Q6IQ55 1244 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms