RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 SPATA1Q5VX52 437 aa14.62□□□□□ -0.07
COL12A1-205ENST00000425443 BLIDQ8IZY5 108 aa14.62□□□□□ -0.07
COL12A1-205ENST00000425443 PNKPQ96T60 521 aa14.62□□□□□ -0.07
COL12A1-205ENST00000425443 ANKZF1Q9H8Y5 726 aa14.62□□□□□ -0.07
COL12A1-205ENST00000425443 SUGCTQ9HAC7 445 aa14.62□□□□□ -0.07
COL12A1-205ENST00000425443 GNAQP50148 359 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 HNRNPH2P55795 449 aaKnown RBP14.61□□□□□ -0.07
COL12A1-205ENST00000425443 FILIP1LQ4L180 1135 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 DGKHQ86XP1 1220 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 STAG2Q8N3U4 1231 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 ZNF513Q8N8E2 541 aaPredicted RBP14.61□□□□□ -0.07
COL12A1-205ENST00000425443 SLC44A5Q8NCS7 719 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 TNFRSF25Q93038 417 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 PANX2Q96RD6 677 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 MFAP3LO75121 409 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 ERVK-24P63145 666 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 ATP2C1P98194 919 aaPredicted RBP14.61□□□□□ -0.07
COL12A1-205ENST00000425443 TSPYL1Q9H0U9 437 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 ZNF287Q9HBT7 754 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 SRCAPQ6ZRS2 3230 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 CCDC175P0C221 793 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 SMC1AQ14683 1233 aaKnown RBP14.61□□□□□ -0.07
COL12A1-205ENST00000425443 RCSD1Q6JBY9 416 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 PIK3R5Q8WYR1 880 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 GSDMAQ96QA5 445 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 CPVLQ9H3G5 476 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 TAB2Q9NYJ8 693 aa14.61□□□□□ -0.07
COL12A1-205ENST00000425443 N4BP3O15049 544 aa14.6□□□□□ -0.07
COL12A1-205ENST00000425443 TRAPPC10P48553 1259 aa14.6□□□□□ -0.07
COL12A1-205ENST00000425443 CCDC178Q5BJE1 867 aa14.6□□□□□ -0.07
COL12A1-205ENST00000425443 WWC2Q6AWC2 1192 aa14.6□□□□□ -0.07
COL12A1-205ENST00000425443 GPIHBP1Q8IV16 184 aa14.6□□□□□ -0.07
COL12A1-205ENST00000425443 GOLGA6L9A6NEM1 432 aa14.6□□□□□ -0.07
COL12A1-205ENST00000425443 PP2D1A8MPX8 630 aa14.6□□□□□ -0.07
COL12A1-205ENST00000425443 GOLGA8HP0CJ92 632 aa14.6□□□□□ -0.07
COL12A1-205ENST00000425443 IL17RBQ9NRM6 502 aa14.6□□□□□ -0.07
COL12A1-205ENST00000425443 LONRF2Q1L5Z9 754 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 ZNF569Q5MCW4 686 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 RASGRP2Q7LDG7 609 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 TEX11Q8IYF3 940 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 RABGGTAQ92696 567 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 GOLGA1Q92805 767 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 NUP88Q99567 741 aaPredicted RBP14.59□□□□□ -0.07
COL12A1-205ENST00000425443 PYM1Q9BRP8 204 aaKnown RBP14.59□□□□□ -0.07
COL12A1-205ENST00000425443 TFR2Q9UP52 801 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 SCN7AQ01118 1682 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.59□□□□□ -0.07
COL12A1-205ENST00000425443 C6orf229H3BNL8 230 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 BTDP43251 543 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 KRT31Q15323 416 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 E2F4Q16254 413 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 GRIK5Q16478 980 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 PCDHA4Q9UN74 947 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 GDAQ9Y2T3 454 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 STAT6P42226 847 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 CHMP4BP1P59074 171 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 SLC35F6Q8N357 371 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 CCDC148Q8NFR7 591 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 VAT1LQ9HCJ6 419 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 TRIM10Q9UDY6 481 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 GGA1Q9UJY5 639 aa14.59□□□□□ -0.07
COL12A1-205ENST00000425443 GPSM2P81274 684 aa14.58□□□□□ -0.08
COL12A1-205ENST00000425443 SKIDA1Q1XH10 827 aa14.58□□□□□ -0.08
COL12A1-205ENST00000425443 DTHD1Q6ZMT9 781 aa14.58□□□□□ -0.08
COL12A1-205ENST00000425443 ARFGAP3Q9NP61 516 aa14.58□□□□□ -0.08
COL12A1-205ENST00000425443 CCDC88AQ3V6T2 1871 aa14.58□□□□□ -0.08
COL12A1-205ENST00000425443 TRIM49BA6NDI0 452 aa14.58□□□□□ -0.08
COL12A1-205ENST00000425443 TPM1P09493 284 aa14.58□□□□□ -0.08
COL12A1-205ENST00000425443 ANKRD20A12PQ8NF67 263 aa14.58□□□□□ -0.08
COL12A1-205ENST00000425443 A0A1B0GUL6 1792 aa14.58□□□□□ -0.08
COL12A1-205ENST00000425443 N4BP1O75113 896 aaKnown RBP14.57□□□□□ -0.08
COL12A1-205ENST00000425443 UBA7P41226 1012 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 ARHGAP25P42331 645 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 INF2Q27J81 1249 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 KIF4BQ2VIQ3 1234 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 PRR5LQ6MZQ0 368 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 PDXDC2PQ6P474 469 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 SRGAP1Q7Z6B7 1085 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 CTAGE1Q96RT6 745 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 CD209Q9NNX6 404 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 LTBP4Q8N2S1 1624 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 GRM4Q14833 912 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 MFSD14BQ5SR56 506 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 FNBP4Q8N3X1 1017 aaPredicted RBP14.57□□□□□ -0.08
COL12A1-205ENST00000425443 EYA3Q99504 573 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 TMEM47Q9BQJ4 181 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 KLRF2D3W0D1 207 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 ERCC3P19447 782 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 NAPAP54920 295 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 CEP120Q8N960 986 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 RBM17Q96I25 401 aaKnown RBP14.57□□□□□ -0.08
COL12A1-205ENST00000425443 CHP1Q99653 195 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 SH3GLB2Q9NR46 395 aa14.57□□□□□ -0.08
COL12A1-205ENST00000425443 MAP2K7O14733 419 aa14.56□□□□□ -0.08
COL12A1-205ENST00000425443 LONP1P36776 959 aaKnown RBP14.56□□□□□ -0.08
COL12A1-205ENST00000425443 BEND6Q5SZJ8 279 aaPredicted RBP14.56□□□□□ -0.08
COL12A1-205ENST00000425443 DRC1Q96MC2 740 aa14.56□□□□□ -0.08
COL12A1-205ENST00000425443 ABHD10Q9NUJ1 306 aa14.56□□□□□ -0.08
COL12A1-205ENST00000425443 SEC63Q9UGP8 760 aaKnown RBP14.56□□□□□ -0.08
COL12A1-205ENST00000425443 MAD2L2Q9UI95 211 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms