RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 PRCPP42785 496 aa13.06□□□□□ -0.32
UBR4-207ENST00000425413 RBL2Q08999 1139 aa13.06□□□□□ -0.32
UBR4-207ENST00000425413 ARL6IP4Q66PJ3 421 aaKnown RBP13.06□□□□□ -0.32
UBR4-207ENST00000425413 KCTD1Q719H9 257 aa13.06□□□□□ -0.32
UBR4-207ENST00000425413 TMEM139Q8IV31 216 aa13.06□□□□□ -0.32
UBR4-207ENST00000425413 ZSCAN29Q8IWY8 852 aaPredicted RBP13.06□□□□□ -0.32
UBR4-207ENST00000425413 GJA10Q969M2 543 aa13.06□□□□□ -0.32
UBR4-207ENST00000425413 PSDA5PKW4 1024 aaPredicted RBP13.05□□□□□ -0.32
UBR4-207ENST00000425413 SOWAHDA6NJG2 315 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 N4BP3O15049 544 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 UBE2SQ16763 222 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 CDC42EP5Q6NZY7 148 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 APTXQ7Z2E3 356 aaKnown RBP13.05□□□□□ -0.32
UBR4-207ENST00000425413 POTEDQ86YR6 584 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 FAM163AQ96GL9 167 aaPredicted RBP13.05□□□□□ -0.32
UBR4-207ENST00000425413 SPZ1Q9BXG8 430 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 TMX4Q9H1E5 349 aaPredicted RBP13.05□□□□□ -0.32
UBR4-207ENST00000425413 PPP2R2CQ9Y2T4 447 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 A0A1B0GTH6 734 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 PAK1Q13153 545 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 TBX2Q13207 712 aaPredicted RBP13.05□□□□□ -0.32
UBR4-207ENST00000425413 PPFIBP1Q86W92 1011 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 REXO1Q8N1G1 1221 aaKnown RBP13.05□□□□□ -0.32
UBR4-207ENST00000425413 HPS3Q969F9 1004 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 ZMYND12Q9H0C1 365 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 SERPINB13Q9UIV8 391 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 MAST2Q6P0Q8 1798 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 A0A0U1RQJ8 604 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 PLCG1P19174 1290 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 TNNI2P48788 182 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 PMS1P54277 932 aaKnown RBP13.05□□□□□ -0.32
UBR4-207ENST00000425413 KRT31Q15323 416 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 ELF2Q15723 593 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 ATRIPQ8WXE1 791 aa13.05□□□□□ -0.32
UBR4-207ENST00000425413 URI1O94763 535 aaPredicted RBP13.04□□□□□ -0.32
UBR4-207ENST00000425413 CASP14P31944 242 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 CABP7Q86V35 215 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 REXO1L1PQ8IX06 675 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 NLGN1Q8N2Q7 840 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 LZTS2Q9BRK4 669 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 ADD3Q9UEY8 706 aaKnown RBP13.04□□□□□ -0.32
UBR4-207ENST00000425413 PARP3Q9Y6F1 533 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 DLEC1Q9Y238 1755 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 FANCGO15287 622 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 ARHGAP6O43182 974 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 MYO1BO43795 1136 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 OR52Z1P0C646 297 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 NPR1P16066 1061 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 GNA11P29992 359 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 KMT5BQ4FZB7 885 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 FILIP1LQ4L180 1135 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 CDKAL1Q5VV42 579 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 NEK8Q86SG6 692 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 IRX2Q9BZI1 471 aaPredicted RBP13.04□□□□□ -0.32
UBR4-207ENST00000425413 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
UBR4-207ENST00000425413 KLRG2A4D1S0 409 aaPredicted RBP13.03□□□□□ -0.32
UBR4-207ENST00000425413 AKR1B15C9JRZ8 316 aaPredicted RBP13.03□□□□□ -0.32
UBR4-207ENST00000425413 TDP2O95551 362 aa13.03□□□□□ -0.32
UBR4-207ENST00000425413 CHRNA5P30532 468 aa13.03□□□□□ -0.32
UBR4-207ENST00000425413 ETF1P62495 437 aaKnown RBP13.03□□□□□ -0.32
UBR4-207ENST00000425413 ZNF658Q5TYW1 1059 aaPredicted RBP13.03□□□□□ -0.32
UBR4-207ENST00000425413 KRT25Q7Z3Z0 450 aa13.03□□□□□ -0.32
UBR4-207ENST00000425413 CERS3Q8IU89 383 aa13.03□□□□□ -0.32
UBR4-207ENST00000425413 CCDC12Q8WUD4 166 aaPredicted RBP13.03□□□□□ -0.32
UBR4-207ENST00000425413 TEKT1Q969V4 418 aa13.03□□□□□ -0.32
UBR4-207ENST00000425413 LZTFL1Q9NQ48 299 aa13.03□□□□□ -0.32
UBR4-207ENST00000425413 NAV1Q8NEY1 1877 aa13.03□□□□□ -0.32
UBR4-207ENST00000425413 SNAP25P60880 206 aa13.03□□□□□ -0.32
UBR4-207ENST00000425413 GNG11P61952 73 aa13.03□□□□□ -0.32
UBR4-207ENST00000425413 DAGLBQ8NCG7 672 aa13.03□□□□□ -0.32
UBR4-207ENST00000425413 ANKRD7Q92527 254 aa13.03□□□□□ -0.32
UBR4-207ENST00000425413 MORC2Q9Y6X9 1032 aaPredicted RBP13.03□□□□□ -0.32
UBR4-207ENST00000425413 UTRNP46939 3433 aa13.03□□□□□ -0.32
UBR4-207ENST00000425413 ERCC3P19447 782 aa13.02□□□□□ -0.32
UBR4-207ENST00000425413 SHMT1P34896 483 aa13.02□□□□□ -0.32
UBR4-207ENST00000425413 FXR1P51114 621 aaKnown RBP eCLIP13.02□□□□□ -0.325e-7■■■■□ 19.9
UBR4-207ENST00000425413 ASIC1P78348 528 aa13.02□□□□□ -0.32
UBR4-207ENST00000425413 GABPAQ06546 454 aa13.02□□□□□ -0.32
UBR4-207ENST00000425413 APOBEC3HQ6NTF7 200 aaKnown RBP13.02□□□□□ -0.32
UBR4-207ENST00000425413 KCNJ18B7U540 433 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 USP17L10C9JJH3 530 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 RNF225M0QZC1 329 aaPredicted RBP13.02□□□□□ -0.33
UBR4-207ENST00000425413 SLC37A4O43826 429 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 SLU7O95391 586 aaKnown RBP13.02□□□□□ -0.33
UBR4-207ENST00000425413 CRKP46108 304 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 KCNJ12Q14500 433 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 GALNT17Q6IS24 598 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 ADGRF4Q8IZF3 695 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 WDR24Q96S15 920 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 DDX60LQ5H9U9 1706 aaKnown RBP13.02□□□□□ -0.33
UBR4-207ENST00000425413 POTEMA6NI47 508 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 TTLL1O95922 423 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 ADCY7P51828 1080 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 ERCC6LQ2NKX8 1250 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 TRIM65Q6PJ69 517 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 C2CD5Q86YS7 1000 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 TRIM47Q96LD4 638 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 RMND1Q9NWS8 449 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 RWDD2AQ9UIY3 292 aa13.02□□□□□ -0.33
UBR4-207ENST00000425413 KIF2AO00139 706 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms