RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 FEM1BQ9UK73 627 aa15.52■□□□□ 0.07
PRPF39-202ENST00000424478 PPP1R9AQ9ULJ8 1098 aa15.52■□□□□ 0.07
PRPF39-202ENST00000424478 RIPK3Q9Y572 518 aa15.52■□□□□ 0.07
PRPF39-202ENST00000424478 SPDYE16A6NNV3 312 aaPredicted RBP15.51■□□□□ 0.07
PRPF39-202ENST00000424478 IGF2BP3O00425 579 aaKnown RBP eCLIP15.51■□□□□ 0.07
PRPF39-202ENST00000424478 ZBTB5O15062 677 aa15.51■□□□□ 0.07
PRPF39-202ENST00000424478 PPP2R5BQ15173 497 aa15.51■□□□□ 0.07
PRPF39-202ENST00000424478 TPRNQ4KMQ1 711 aa15.51■□□□□ 0.07
PRPF39-202ENST00000424478 HTTP42858 3142 aa15.51■□□□□ 0.07
PRPF39-202ENST00000424478 STXBP3O00186 592 aa15.51■□□□□ 0.07
PRPF39-202ENST00000424478 PDHXO00330 501 aa15.51■□□□□ 0.07
PRPF39-202ENST00000424478 NAPAP54920 295 aa15.51■□□□□ 0.07
PRPF39-202ENST00000424478 IRX3P78415 501 aaPredicted RBP15.51■□□□□ 0.07
PRPF39-202ENST00000424478 PRPF38AQ8NAV1 312 aaKnown RBP15.51■□□□□ 0.07
PRPF39-202ENST00000424478 CHURC1Q8WUH1 139 aa15.51■□□□□ 0.07
PRPF39-202ENST00000424478 TXNRD2Q9NNW7 524 aa15.51■□□□□ 0.07
PRPF39-202ENST00000424478 AGTPBP1Q9UPW5 1226 aa15.51■□□□□ 0.07
PRPF39-202ENST00000424478 USP17L15C9J2P7 530 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 USP17L13C9JLJ4 530 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 USP17L11C9JVI0 530 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 USP17L18D6R9N7 530 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 USP17L22D6RA61 530 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 USP17L17D6RBQ6 530 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 USP17L19D6RCP7 530 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 USP17L20D6RJB6 530 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 APLP1P51693 650 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 USP17L24Q0WX57 530 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 UBE2SQ16763 222 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 BTNL9Q6UXG8 535 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 PCDHA1Q9Y5I3 950 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 LOC285556D6RIA3 1793 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 ZNF536O15090 1300 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 BTBD18B2RXH4 712 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 VWA5AO00534 786 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 SLC10A3P09131 477 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 COG2Q14746 738 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 IL27Q8NEV9 243 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 LZTS2Q9BRK4 669 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 BTBD7Q9P203 1132 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 SYNPO2Q9UMS6 1093 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 STK36Q9NRP7 1315 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 PNMA6FA0A0J9YX94 578 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 GTF2A2P52657 109 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 TMEM132BQ14DG7 1078 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 EARS2Q5JPH6 523 aaKnown RBP15.5■□□□□ 0.07
PRPF39-202ENST00000424478 FBXO18Q8NFZ0 1043 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 TMEM260Q9NX78 707 aa15.5■□□□□ 0.07
PRPF39-202ENST00000424478 DDX49Q9Y6V7 483 aaKnown RBP15.5■□□□□ 0.07
PRPF39-202ENST00000424478 ALAS1P13196 640 aa15.49■□□□□ 0.07
PRPF39-202ENST00000424478 DSG3P32926 999 aa15.49■□□□□ 0.07
PRPF39-202ENST00000424478 NLRP5P59047 1200 aa15.49■□□□□ 0.07
PRPF39-202ENST00000424478 MTMR8Q96EF0 704 aa15.49■□□□□ 0.07
PRPF39-202ENST00000424478 CETPP11597 493 aa15.49■□□□□ 0.07
PRPF39-202ENST00000424478 HOXA13P31271 388 aaPredicted RBP15.49■□□□□ 0.07
PRPF39-202ENST00000424478 FBXO11Q86XK2 927 aa15.49■□□□□ 0.07
PRPF39-202ENST00000424478 PROCA1Q8NCQ7 364 aaPredicted RBP15.49■□□□□ 0.07
PRPF39-202ENST00000424478 PURBQ96QR8 312 aaKnown RBP15.49■□□□□ 0.07
PRPF39-202ENST00000424478 FTOQ9C0B1 505 aaKnown RBP eCLIP15.49■□□□□ 0.07
PRPF39-202ENST00000424478 CWC22Q9HCG8 908 aaKnown RBP15.49■□□□□ 0.07
PRPF39-202ENST00000424478 CCPG1Q9ULG6 757 aa15.49■□□□□ 0.07
PRPF39-202ENST00000424478 ZBTB48P10074 688 aaPredicted RBP15.48■□□□□ 0.07
PRPF39-202ENST00000424478 HERVK_113P62684 666 aa15.48■□□□□ 0.07
PRPF39-202ENST00000424478 KIF23Q02241 960 aaPredicted RBP15.48■□□□□ 0.07
PRPF39-202ENST00000424478 NPY5RQ15761 445 aa15.48■□□□□ 0.07
PRPF39-202ENST00000424478 DEFB115Q30KQ5 88 aa15.48■□□□□ 0.07
PRPF39-202ENST00000424478 USP17L6PQ6QN14 398 aa15.48■□□□□ 0.07
PRPF39-202ENST00000424478 RANBP17Q9H2T7 1088 aaKnown RBP15.48■□□□□ 0.07
PRPF39-202ENST00000424478 BARHL2Q9NY43 387 aa15.48■□□□□ 0.07
PRPF39-202ENST00000424478 ATP2B1P20020 1258 aa15.48■□□□□ 0.07
PRPF39-202ENST00000424478 NBR1Q14596 966 aa15.48■□□□□ 0.07
PRPF39-202ENST00000424478 Q3C1V9 767 aa15.48■□□□□ 0.07
PRPF39-202ENST00000424478 MUM1L1Q5H9M0 696 aa15.48■□□□□ 0.07
PRPF39-202ENST00000424478 FAM160B2Q86V87 743 aa15.48■□□□□ 0.07
PRPF39-202ENST00000424478 ZFP91Q96JP5 570 aaPredicted RBP15.48■□□□□ 0.07
PRPF39-202ENST00000424478 CAPNS2Q96L46 248 aa15.48■□□□□ 0.07
PRPF39-202ENST00000424478 SLC38A10Q9HBR0 1119 aa15.48■□□□□ 0.07
PRPF39-202ENST00000424478 BIN2Q9UBW5 565 aaPredicted RBP15.48■□□□□ 0.07
PRPF39-202ENST00000424478 CTDP1Q9Y5B0 961 aaPredicted RBP15.48■□□□□ 0.07
PRPF39-202ENST00000424478 SMCO2A6NFE2 343 aa15.48■□□□□ 0.07
PRPF39-202ENST00000424478 NFIBO00712 420 aa15.48■□□□□ 0.07
PRPF39-202ENST00000424478 TRIM29Q14134 588 aa15.48■□□□□ 0.07
PRPF39-202ENST00000424478 FASTKD5Q7L8L6 764 aaKnown RBP15.48■□□□□ 0.07
PRPF39-202ENST00000424478 DIS3L2Q8IYB7 885 aaKnown RBP15.48■□□□□ 0.07
PRPF39-202ENST00000424478 SMCR8Q8TEV9 937 aaPredicted RBP15.48■□□□□ 0.07
PRPF39-202ENST00000424478 OPLAHO14841 1288 aa15.47■□□□□ 0.07
PRPF39-202ENST00000424478 CEBPZQ03701 1054 aaKnown RBP15.47■□□□□ 0.07
PRPF39-202ENST00000424478 SNRNP48Q6IEG0 339 aaKnown RBP15.47■□□□□ 0.07
PRPF39-202ENST00000424478 ANKRD13CQ8N6S4 541 aa15.47■□□□□ 0.07
PRPF39-202ENST00000424478 ZSCAN22P10073 491 aaPredicted RBP15.47■□□□□ 0.07
PRPF39-202ENST00000424478 JAKMIP3Q5VZ66 844 aa15.47■□□□□ 0.07
PRPF39-202ENST00000424478 UIMC1Q96RL1 719 aa15.47■□□□□ 0.07
PRPF39-202ENST00000424478 AMNQ9BXJ7 453 aa15.47■□□□□ 0.07
PRPF39-202ENST00000424478 CREBZFQ9NS37 354 aa15.47■□□□□ 0.07
PRPF39-202ENST00000424478 CHMP5Q9NZZ3 219 aa15.47■□□□□ 0.07
PRPF39-202ENST00000424478 ZNF214Q9UL59 606 aaPredicted RBP15.47■□□□□ 0.07
PRPF39-202ENST00000424478 BRD1O95696 1058 aa15.46■□□□□ 0.07
PRPF39-202ENST00000424478 MMP1P03956 469 aa15.46■□□□□ 0.07
PRPF39-202ENST00000424478 PHF20Q9BVI0 1012 aa15.46■□□□□ 0.07
PRPF39-202ENST00000424478 GDPD2Q9HCC8 539 aa15.46■□□□□ 0.07
PRPF39-202ENST00000424478 CFBP00751 764 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms