RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 HHIPL1Q96JK4 782 aa2.51□□□□□ -2.01
PMS1-210ENST00000424307 CCDC74BQ96LY2 380 aa2.51□□□□□ -2.01
PMS1-210ENST00000424307 KREMEN1Q96MU8 473 aa2.51□□□□□ -2.01
PMS1-210ENST00000424307 VPS11Q9H270 941 aa2.51□□□□□ -2.01
PMS1-210ENST00000424307 FAM8A1Q9UBU6 413 aa2.51□□□□□ -2.01
PMS1-210ENST00000424307 NCAM1P13591 858 aa2.51□□□□□ -2.01
PMS1-210ENST00000424307 RPL10P27635 214 aaKnown RBP2.51□□□□□ -2.01
PMS1-210ENST00000424307 PDE4CQ08493 712 aa2.51□□□□□ -2.01
PMS1-210ENST00000424307 HSF5Q4G112 596 aaPredicted RBP2.51□□□□□ -2.01
PMS1-210ENST00000424307 FAM26FQ5R3K3 315 aa2.51□□□□□ -2.01
PMS1-210ENST00000424307 GLB1LQ6UWU2 654 aa2.51□□□□□ -2.01
PMS1-210ENST00000424307 B3GNT8Q7Z7M8 397 aa2.51□□□□□ -2.01
PMS1-210ENST00000424307 SLFN12Q8IYM2 578 aa2.51□□□□□ -2.01
PMS1-210ENST00000424307 XAGE3Q8WTP9 111 aa2.51□□□□□ -2.01
PMS1-210ENST00000424307 TRAIPQ9BWF2 469 aa2.51□□□□□ -2.01
PMS1-210ENST00000424307 EBF1Q9UH73 591 aa2.51□□□□□ -2.01
PMS1-210ENST00000424307 SPG7Q9UQ90 795 aa2.51□□□□□ -2.01
PMS1-210ENST00000424307 CYBBP04839 570 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 RPL6Q02878 288 aaKnown RBP2.5□□□□□ -2.01
PMS1-210ENST00000424307 NMIQ13287 307 aaPredicted RBP2.5□□□□□ -2.01
PMS1-210ENST00000424307 PAQR3Q6TCH7 311 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 FERMT3Q86UX7 667 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 SH3RF3Q8TEJ3 882 aaPredicted RBP2.5□□□□□ -2.01
PMS1-210ENST00000424307 CPA5Q8WXQ8 436 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 ZNF747Q9BV97 191 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 NTMQ9P121 344 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 TESMINQ9Y4I5 508 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 CORINQ9Y5Q5 1042 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 DNAJA2O60884 412 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 USP2O75604 605 aaPredicted RBP2.5□□□□□ -2.01
PMS1-210ENST00000424307 TFE3P19532 575 aaPredicted RBP2.5□□□□□ -2.01
PMS1-210ENST00000424307 FBLN1P23142 703 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 GNA15P30679 374 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 CORO7P57737 925 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 KCNA1Q09470 495 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 TTBK2Q6IQ55 1244 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 FBXO33Q7Z6M2 555 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 SLCO6A1Q86UG4 719 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 SIRT2Q8IXJ6 389 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 NTN5Q8WTR8 489 aaPredicted RBP2.5□□□□□ -2.01
PMS1-210ENST00000424307 SPATA25Q9BR10 227 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 TTF2Q9UNY4 1162 aaKnown RBP2.5□□□□□ -2.01
PMS1-210ENST00000424307 FAN1Q9Y2M0 1017 aa2.5□□□□□ -2.01
PMS1-210ENST00000424307 TNNI2P48788 182 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 TRIM26Q12899 539 aaPredicted RBP2.49□□□□□ -2.01
PMS1-210ENST00000424307 MLECQ14165 292 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 PLEKHN1Q494U1 663 aaPredicted RBP2.49□□□□□ -2.01
PMS1-210ENST00000424307 SND1Q7KZF4 910 aaKnown RBP eCLIP2.49□□□□□ -2.01
PMS1-210ENST00000424307 DNAJC10Q8IXB1 793 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 FAM13CQ8NE31 585 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 ACSF2Q96CM8 615 aaPredicted RBP2.49□□□□□ -2.01
PMS1-210ENST00000424307 C8orf49Q96NF6 230 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 HDAC8Q9BY41 377 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 MIR1-1HGQ9H1L0 117 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 PARP2Q9UGN5 583 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 TCFL5Q9UL49 500 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 UPK3BL1B0FP48 263 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 UPK3BL2E5RIL1 263 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 NANOS3P60323 173 aaKnown RBP2.49□□□□□ -2.01
PMS1-210ENST00000424307 SLC9A5Q14940 896 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 CCDC85BQ15834 202 aaPredicted RBP2.49□□□□□ -2.01
PMS1-210ENST00000424307 HLA-DQA1Q5Y7H0 255 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 RPTNQ6XPR3 784 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 BNC2Q6ZN30 1099 aaPredicted RBP2.49□□□□□ -2.01
PMS1-210ENST00000424307 AGMOQ6ZNB7 445 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 ZSCAN29Q8IWY8 852 aaPredicted RBP2.49□□□□□ -2.01
PMS1-210ENST00000424307 TCTN2Q96GX1 697 aa2.49□□□□□ -2.01
PMS1-210ENST00000424307 PRR36Q9H6K5 1346 aa2.48□□□□□ -2.01
PMS1-210ENST00000424307 PRPF40AO75400 957 aaKnown RBP2.48□□□□□ -2.01
PMS1-210ENST00000424307 ERBB2P04626 1255 aa2.48□□□□□ -2.01
PMS1-210ENST00000424307 ATP2B2Q01814 1243 aa2.48□□□□□ -2.01
PMS1-210ENST00000424307 TBC1D10BQ4KMP7 808 aaPredicted RBP2.48□□□□□ -2.01
PMS1-210ENST00000424307 NLGN2Q8NFZ4 835 aa2.48□□□□□ -2.01
PMS1-210ENST00000424307 FBXO27Q8NI29 283 aa2.48□□□□□ -2.01
PMS1-210ENST00000424307 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.48□□□□□ -2.01
PMS1-210ENST00000424307 TMEM82A0PJX8 343 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 SMARCA5O60264 1052 aaPredicted RBP2.47□□□□□ -2.01
PMS1-210ENST00000424307 SYPP08247 313 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 PRKCAP17252 672 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 LIG3P49916 1009 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 TSPAN17Q96FV3 270 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 COPRSQ9NQ92 184 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 AK5Q9Y6K8 562 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 C9orf118A6NHY6 69 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 ZNF205O95201 554 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 ZBTB7AO95365 584 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 EFEMP2O95967 443 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 PLCG1P19174 1290 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 EIF4BP23588 611 aaKnown RBP2.47□□□□□ -2.01
PMS1-210ENST00000424307 CCNFP41002 786 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 SELENOPP49908 381 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 FAM160A1Q05DH4 1040 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 DPY19L2P1Q6NXN4 242 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 CYP2R1Q6VVX0 501 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 NUP43Q8NFH3 380 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 JARID2Q92833 1246 aaPredicted RBP2.47□□□□□ -2.01
PMS1-210ENST00000424307 FOXP3Q9BZS1 431 aa2.47□□□□□ -2.01
PMS1-210ENST00000424307 A0A1W2PQ27 194 aa2.46□□□□□ -2.02
PMS1-210ENST00000424307 A0A1W2PQ64 194 aa2.46□□□□□ -2.02
PMS1-210ENST00000424307 A0A1W2PQC6 194 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms