RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 NUP88Q99567 741 aaPredicted RBP20.09■□□□□ 0.81
CHCHD3-202ENST00000423635 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.09■□□□□ 0.815e-14■□□□□ 9
CHCHD3-202ENST00000423635 MTIF3Q9H2K0 278 aaKnown RBP20.09■□□□□ 0.81
CHCHD3-202ENST00000423635 NKX2-4Q9H2Z4 354 aa20.09■□□□□ 0.81
CHCHD3-202ENST00000423635 ZBED4O75132 1171 aa20.08■□□□□ 0.81
CHCHD3-202ENST00000423635 ARMCX2Q7L311 632 aa20.08■□□□□ 0.81
CHCHD3-202ENST00000423635 CPXCR1Q8N123 301 aa20.08■□□□□ 0.81
CHCHD3-202ENST00000423635 ANKRD35Q8N283 1001 aa20.08■□□□□ 0.81
CHCHD3-202ENST00000423635 CHST13Q8NET6 341 aa20.08■□□□□ 0.81
CHCHD3-202ENST00000423635 BOLA2Q9H3K6 86 aa20.08■□□□□ 0.81
CHCHD3-202ENST00000423635 SLC38A10Q9HBR0 1119 aa20.08■□□□□ 0.81
CHCHD3-202ENST00000423635 FBXO40Q9UH90 709 aa20.08■□□□□ 0.81
CHCHD3-202ENST00000423635 YBX2Q9Y2T7 364 aaKnown RBP20.08■□□□□ 0.81
CHCHD3-202ENST00000423635 SLC4A4Q9Y6R1 1079 aa20.08■□□□□ 0.81
CHCHD3-202ENST00000423635 BDP1A6H8Y1 2624 aa20.08■□□□□ 0.8
CHCHD3-202ENST00000423635 NDUFB10O96000 172 aa20.07■□□□□ 0.8
CHCHD3-202ENST00000423635 BMP1P13497 986 aa20.07■□□□□ 0.8
CHCHD3-202ENST00000423635 ATP5JP18859 108 aa20.07■□□□□ 0.8
CHCHD3-202ENST00000423635 OAZ1P54368 228 aa20.07■□□□□ 0.8
CHCHD3-202ENST00000423635 SEZ6LQ9BYH1 1024 aa20.07■□□□□ 0.8
CHCHD3-202ENST00000423635 TSPYL2Q9H2G4 693 aaPredicted RBP20.07■□□□□ 0.8
CHCHD3-202ENST00000423635 XIRP2A4UGR9 3374 aa20.07■□□□□ 0.8
CHCHD3-202ENST00000423635 GREB1LQ9C091 1923 aaPredicted RBP20.06■□□□□ 0.8
CHCHD3-202ENST00000423635 APBB1O00213 710 aa20.06■□□□□ 0.8
CHCHD3-202ENST00000423635 CABYRO75952 493 aa20.06■□□□□ 0.8
CHCHD3-202ENST00000423635 CHGBP05060 677 aa20.06■□□□□ 0.8
CHCHD3-202ENST00000423635 RASA1P20936 1047 aa20.06■□□□□ 0.8
CHCHD3-202ENST00000423635 SBK1Q52WX2 424 aa20.06■□□□□ 0.8
CHCHD3-202ENST00000423635 CCDC144CPQ8IYA2 1237 aa20.06■□□□□ 0.8
CHCHD3-202ENST00000423635 IL27Q8NEV9 243 aa20.06■□□□□ 0.8
CHCHD3-202ENST00000423635 FAM122AQ96E09 287 aa20.06■□□□□ 0.8
CHCHD3-202ENST00000423635 HAUS7Q99871 368 aa20.06■□□□□ 0.8
CHCHD3-202ENST00000423635 HIPK3Q9H422 1215 aa20.06■□□□□ 0.8
CHCHD3-202ENST00000423635 RAVER2Q9HCJ3 691 aaKnown RBP20.06■□□□□ 0.8
CHCHD3-202ENST00000423635 ARPP21Q9UBL0 812 aaPredicted RBP20.06■□□□□ 0.8
CHCHD3-202ENST00000423635 SLC4A3P48751 1232 aa20.05■□□□□ 0.8
CHCHD3-202ENST00000423635 OTOP2Q7RTS6 562 aa20.05■□□□□ 0.8
CHCHD3-202ENST00000423635 MKL1Q969V6 931 aa20.05■□□□□ 0.8
CHCHD3-202ENST00000423635 PUS7LQ9H0K6 701 aaKnown RBP20.05■□□□□ 0.8
CHCHD3-202ENST00000423635 FEM1BQ9UK73 627 aa20.05■□□□□ 0.8
CHCHD3-202ENST00000423635 GNEQ9Y223 722 aaKnown RBP20.05■□□□□ 0.8
CHCHD3-202ENST00000423635 CTDP1Q9Y5B0 961 aaPredicted RBP20.05■□□□□ 0.8
CHCHD3-202ENST00000423635 ASTN1O14525 1302 aa20.05■□□□□ 0.8
CHCHD3-202ENST00000423635 IGKV6D-41A0A0C4DH26 115 aa20.04■□□□□ 0.8
CHCHD3-202ENST00000423635 RAB11FIP3O75154 756 aa20.04■□□□□ 0.8
CHCHD3-202ENST00000423635 BEX3Q00994 111 aa20.04■□□□□ 0.8
CHCHD3-202ENST00000423635 TNFAIP2Q03169 654 aa20.04■□□□□ 0.8
CHCHD3-202ENST00000423635 ITGA7Q13683 1181 aa20.04■□□□□ 0.8
CHCHD3-202ENST00000423635 RPAP2Q8IXW5 612 aaPredicted RBP20.04■□□□□ 0.8
CHCHD3-202ENST00000423635 KIFC2Q96AC6 838 aa20.04■□□□□ 0.8
CHCHD3-202ENST00000423635 C1QTNF1Q9BXJ1 281 aa20.04■□□□□ 0.8
CHCHD3-202ENST00000423635 CLIP2Q9UDT6 1046 aa20.04■□□□□ 0.8
CHCHD3-202ENST00000423635 SYNPO2Q9UMS6 1093 aa20.04■□□□□ 0.8
CHCHD3-202ENST00000423635 REV3LO60673 3130 aa20.04■□□□□ 0.8
CHCHD3-202ENST00000423635 GRIN2DO15399 1336 aa20.04■□□□□ 0.8
CHCHD3-202ENST00000423635 UMODL1Q5DID0 1318 aa20.04■□□□□ 0.8
CHCHD3-202ENST00000423635 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.03■□□□□ 0.8
CHCHD3-202ENST00000423635 ZSCAN25Q6NSZ9 544 aa20.03■□□□□ 0.8
CHCHD3-202ENST00000423635 CXCL17Q6UXB2 119 aa20.03■□□□□ 0.8
CHCHD3-202ENST00000423635 RPUSD2Q8IZ73 545 aaKnown RBP20.03■□□□□ 0.8
CHCHD3-202ENST00000423635 FAM133AQ8N9E0 248 aa20.03■□□□□ 0.8
CHCHD3-202ENST00000423635 NOC4LQ9BVI4 516 aaKnown RBP20.03■□□□□ 0.8
CHCHD3-202ENST00000423635 MKNK2Q9HBH9 465 aa20.03■□□□□ 0.8
CHCHD3-202ENST00000423635 PCDHA11Q9Y5I1 949 aa20.03■□□□□ 0.8
CHCHD3-202ENST00000423635 MCM3APO60318 1980 aa20.03■□□□□ 0.8
CHCHD3-202ENST00000423635 FDX1P10109 184 aa20.02■□□□□ 0.8
CHCHD3-202ENST00000423635 POU3F3P20264 500 aaPredicted RBP20.02■□□□□ 0.8
CHCHD3-202ENST00000423635 CNTN2Q02246 1040 aa20.02■□□□□ 0.8
CHCHD3-202ENST00000423635 AAK1Q2M2I8 961 aa20.02■□□□□ 0.8
CHCHD3-202ENST00000423635 GIMAP6Q6P9H5 292 aa20.02■□□□□ 0.8
CHCHD3-202ENST00000423635 VWCEQ96DN2 955 aa20.02■□□□□ 0.8
CHCHD3-202ENST00000423635 STRBPQ96SI9 672 aaKnown RBP20.02■□□□□ 0.8
CHCHD3-202ENST00000423635 SLC4A7Q9Y6M7 1214 aa20.02■□□□□ 0.8
CHCHD3-202ENST00000423635 RABGGTBP53611 331 aa20.02■□□□□ 0.79
CHCHD3-202ENST00000423635 CCL23P55773 120 aa20.02■□□□□ 0.79
CHCHD3-202ENST00000423635 PPP2R2DQ66LE6 453 aa20.02■□□□□ 0.79
CHCHD3-202ENST00000423635 SIRT2Q8IXJ6 389 aa20.02■□□□□ 0.79
CHCHD3-202ENST00000423635 NECAB3Q96P71 396 aaPredicted RBP20.02■□□□□ 0.79
CHCHD3-202ENST00000423635 WNT8AQ9H1J5 351 aa20.02■□□□□ 0.79
CHCHD3-202ENST00000423635 Q9Y3F1 56 aa20.02■□□□□ 0.79
CHCHD3-202ENST00000423635 ARIH1Q9Y4X5 557 aaPredicted RBP20.02■□□□□ 0.79
CHCHD3-202ENST00000423635 GBF1Q92538 1859 aa20.01■□□□□ 0.79
CHCHD3-202ENST00000423635 ASB14A6NK59 587 aa20.01■□□□□ 0.79
CHCHD3-202ENST00000423635 GSG1L2A8MUP6 293 aa20.01■□□□□ 0.79
CHCHD3-202ENST00000423635 ZEB2O60315 1214 aa20.01■□□□□ 0.79
CHCHD3-202ENST00000423635 B4GALT4O60513 344 aa20.01■□□□□ 0.79
CHCHD3-202ENST00000423635 HMMRO75330 724 aa20.01■□□□□ 0.79
CHCHD3-202ENST00000423635 FSCN1Q16658 493 aaKnown RBP20.01■□□□□ 0.79
CHCHD3-202ENST00000423635 TLK2Q86UE8 772 aa20.01■□□□□ 0.79
CHCHD3-202ENST00000423635 GMCL1P1Q8NEA9 526 aa20.01■□□□□ 0.79
CHCHD3-202ENST00000423635 PANK1Q8TE04 598 aa20.01■□□□□ 0.79
CHCHD3-202ENST00000423635 TRPV6Q9H1D0 765 aa20.01■□□□□ 0.79
CHCHD3-202ENST00000423635 SOWAHBA6NEL2 793 aa20■□□□□ 0.79
CHCHD3-202ENST00000423635 ERC2O15083 957 aa20■□□□□ 0.79
CHCHD3-202ENST00000423635 MYOGP15173 224 aa20■□□□□ 0.79
CHCHD3-202ENST00000423635 HOXD11P31277 338 aaPredicted RBP20■□□□□ 0.79
CHCHD3-202ENST00000423635 IQSEC1Q6DN90 963 aa20■□□□□ 0.79
CHCHD3-202ENST00000423635 NOL8Q76FK4 1167 aaKnown RBP20■□□□□ 0.79
CHCHD3-202ENST00000423635 AGBL1Q96MI9 1066 aa20■□□□□ 0.79
CHCHD3-202ENST00000423635 ACAD9Q9H845 621 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms