RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 DHX16O60231 1041 aaKnown RBP10.8□□□□□ -0.68
PDGFC-202ENST00000422544 CALM1P0DP23 149 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 CALM2P0DP24 149 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 CALM3P0DP25 149 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 CTGFP29279 349 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 KIF5BP33176 963 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 SLC4A3P48751 1232 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 CCDC174Q6PII3 467 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 NBPF11Q86T75 865 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 ADGRF4Q8IZF3 695 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 FANCBQ8NB91 859 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 CTCFLQ8NI51 663 aaPredicted RBP10.8□□□□□ -0.68
PDGFC-202ENST00000422544 TBC1D32Q96NH3 1257 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 MAP3K14Q99558 947 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 MOV10L1Q9BXT6 1211 aaKnown RBP10.8□□□□□ -0.68
PDGFC-202ENST00000422544 SPATC1LQ9H0A9 340 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 PORCNQ9H237 461 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 EFCC1Q9HA90 598 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 MYH4Q9Y623 1939 aa10.8□□□□□ -0.68
PDGFC-202ENST00000422544 GOLGA8BA8MQT2 603 aa10.79□□□□□ -0.68
PDGFC-202ENST00000422544 FMNL1O95466 1100 aaPredicted RBP10.79□□□□□ -0.68
PDGFC-202ENST00000422544 FDX1P10109 184 aa10.79□□□□□ -0.68
PDGFC-202ENST00000422544 PDIA3P30101 505 aaKnown RBP10.79□□□□□ -0.68
PDGFC-202ENST00000422544 STAT3P40763 770 aa10.79□□□□□ -0.68
PDGFC-202ENST00000422544 PSMC4P43686 418 aa10.79□□□□□ -0.68
PDGFC-202ENST00000422544 AK2P54819 239 aa10.79□□□□□ -0.68
PDGFC-202ENST00000422544 CCNA1P78396 465 aa10.79□□□□□ -0.68
PDGFC-202ENST00000422544 KIF22Q14807 665 aa10.79□□□□□ -0.68
PDGFC-202ENST00000422544 RTN1Q16799 776 aa10.79□□□□□ -0.68
PDGFC-202ENST00000422544 SLC35G1Q2M3R5 365 aa10.79□□□□□ -0.68
PDGFC-202ENST00000422544 CCAR1Q8IX12 1150 aaKnown RBP10.79□□□□□ -0.68
PDGFC-202ENST00000422544 CMTR1Q8N1G2 835 aaKnown RBP10.79□□□□□ -0.68
PDGFC-202ENST00000422544 ERO1AQ96HE7 468 aa10.79□□□□□ -0.68
PDGFC-202ENST00000422544 AGBL1Q96MI9 1066 aa10.79□□□□□ -0.68
PDGFC-202ENST00000422544 ALDH8A1Q9H2A2 487 aaPredicted RBP10.79□□□□□ -0.68
PDGFC-202ENST00000422544 RANBP17Q9H2T7 1088 aaKnown RBP10.79□□□□□ -0.68
PDGFC-202ENST00000422544 ZNF214Q9UL59 606 aaPredicted RBP10.79□□□□□ -0.68
PDGFC-202ENST00000422544 VCANP13611 3396 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 GOLGA8AA7E2F4 631 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 ATP2A1O14983 1001 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 CYTH3O43739 400 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 PLEKHA8P1O95397 391 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 TAL1P17542 331 aaPredicted RBP10.78□□□□□ -0.68
PDGFC-202ENST00000422544 ERCC3P19447 782 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 CDC27P30260 824 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 GNAQP50148 359 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 METAP2P50579 478 aaKnown RBP eCLIP10.78□□□□□ -0.68
PDGFC-202ENST00000422544 FCGRTP55899 365 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 EVCP57679 992 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 CCT2P78371 535 aaKnown RBP10.78□□□□□ -0.68
PDGFC-202ENST00000422544 CDC37Q16543 378 aaPredicted RBP10.78□□□□□ -0.68
PDGFC-202ENST00000422544 WDR78Q5VTH9 848 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 SNRNP48Q6IEG0 339 aaKnown RBP10.78□□□□□ -0.68
PDGFC-202ENST00000422544 NOL8Q76FK4 1167 aaKnown RBP10.78□□□□□ -0.68
PDGFC-202ENST00000422544 NCAPG2Q86XI2 1143 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 RIOX2Q8IUF8 465 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 CCDC82Q8N4S0 544 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 SRBD1Q8N5C6 995 aaKnown RBP10.78□□□□□ -0.68
PDGFC-202ENST00000422544 PIBF1Q8WXW3 757 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 TRIM47Q96LD4 638 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 LZTS2Q9BRK4 669 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 TEX13BQ9BXU2 312 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 RIOX1Q9H6W3 641 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 JMJD4Q9H9V9 463 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 FAM217BQ9NTX9 383 aaPredicted RBP10.78□□□□□ -0.68
PDGFC-202ENST00000422544 TPCN1Q9ULQ1 816 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 RIPK3Q9Y572 518 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 EYSQ5T1H1 3165 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 ZNF536O15090 1300 aa10.78□□□□□ -0.68
PDGFC-202ENST00000422544 TNPO2O14787 897 aaKnown RBP10.77□□□□□ -0.69
PDGFC-202ENST00000422544 MAPK4P31152 587 aa10.77□□□□□ -0.69
PDGFC-202ENST00000422544 ADD1P35611 737 aaKnown RBP10.77□□□□□ -0.69
PDGFC-202ENST00000422544 RCAN1P53805 252 aa10.77□□□□□ -0.69
PDGFC-202ENST00000422544 OAZ1P54368 228 aa10.77□□□□□ -0.69
PDGFC-202ENST00000422544 STK3Q13188 491 aa10.77□□□□□ -0.69
PDGFC-202ENST00000422544 RABEP1Q15276 862 aa10.77□□□□□ -0.69
PDGFC-202ENST00000422544 ANKRD1Q15327 319 aa10.77□□□□□ -0.69
PDGFC-202ENST00000422544 QRICH1Q2TAL8 776 aa10.77□□□□□ -0.69
PDGFC-202ENST00000422544 TMTC3Q6ZXV5 915 aa10.77□□□□□ -0.69
PDGFC-202ENST00000422544 PLEKHH3Q7Z736 793 aa10.77□□□□□ -0.69
PDGFC-202ENST00000422544 ZNF274Q96GC6 653 aaPredicted RBP10.77□□□□□ -0.69
PDGFC-202ENST00000422544 PIGSQ96S52 555 aa10.77□□□□□ -0.69
PDGFC-202ENST00000422544 CWC22Q9HCG8 908 aaKnown RBP10.77□□□□□ -0.69
PDGFC-202ENST00000422544 HOMER2Q9NSB8 354 aa10.77□□□□□ -0.69
PDGFC-202ENST00000422544 RBM28Q9NW13 759 aaKnown RBP10.77□□□□□ -0.69
PDGFC-202ENST00000422544 CCPG1Q9ULG6 757 aa10.77□□□□□ -0.69
PDGFC-202ENST00000422544 TRIM17Q9Y577 477 aa10.77□□□□□ -0.69
PDGFC-202ENST00000422544 SPTBN5Q9NRC6 3674 aaKnown RBP10.76□□□□□ -0.69
PDGFC-202ENST00000422544 CCDC196A0A1B0GTZ2 297 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 hCG_1642624A0A1W2PR95 340 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 SLC25A27O95847 323 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 ICAM1P05362 532 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 ALAS1P13196 640 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 SMARCA1P28370 1054 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 MKRN4PQ13434 485 aaPredicted RBP10.76□□□□□ -0.69
PDGFC-202ENST00000422544 ARHGEF6Q15052 776 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 FBXO46Q6PJ61 603 aaPredicted RBP10.76□□□□□ -0.69
PDGFC-202ENST00000422544 OTOP1Q7RTM1 612 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 GPR142Q7Z601 462 aa10.76□□□□□ -0.69
PDGFC-202ENST00000422544 HOMER1Q86YM7 354 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms