RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 PGK2P07205 417 aa25.75■■□□□ 1.71
TRAF4-204ENST00000422344 LRRC26Q2I0M4 334 aa25.75■■□□□ 1.71
TRAF4-204ENST00000422344 Q7L0L9 218 aa25.75■■□□□ 1.71
TRAF4-204ENST00000422344 RASGRP2Q7LDG7 609 aa25.75■■□□□ 1.71
TRAF4-204ENST00000422344 MAML3Q96JK9 1138 aa25.75■■□□□ 1.71
TRAF4-204ENST00000422344 ZKSCAN3Q9BRR0 538 aa25.75■■□□□ 1.71
TRAF4-204ENST00000422344 FBXO40Q9UH90 709 aa25.75■■□□□ 1.71
TRAF4-204ENST00000422344 RIPK3Q9Y572 518 aa25.75■■□□□ 1.71
TRAF4-204ENST00000422344 CHST13Q8NET6 341 aa25.74■■□□□ 1.71
TRAF4-204ENST00000422344 MSCO60682 206 aa25.73■■□□□ 1.71
TRAF4-204ENST00000422344 DGKHQ86XP1 1220 aa25.73■■□□□ 1.71
TRAF4-204ENST00000422344 PRR12Q9ULL5 1215 aa25.73■■□□□ 1.71
TRAF4-204ENST00000422344 DIS3Q9Y2L1 958 aaKnown RBP25.73■■□□□ 1.71
TRAF4-204ENST00000422344 U3KPZ7 1027 aaPredicted RBP25.73■■□□□ 1.71
TRAF4-204ENST00000422344 FRMPD2Q68DX3 1309 aaPredicted RBP25.72■■□□□ 1.71
TRAF4-204ENST00000422344 SGSM2O43147 1006 aa25.72■■□□□ 1.71
TRAF4-204ENST00000422344 NEFLP07196 543 aa25.72■■□□□ 1.71
TRAF4-204ENST00000422344 TRDNQ13061 729 aa25.72■■□□□ 1.71
TRAF4-204ENST00000422344 CCDC174Q6PII3 467 aa25.72■■□□□ 1.71
TRAF4-204ENST00000422344 ANKRD35Q8N283 1001 aa25.72■■□□□ 1.71
TRAF4-204ENST00000422344 CCDC136Q96JN2 1154 aa25.72■■□□□ 1.71
TRAF4-204ENST00000422344 ZSCAN10Q96SZ4 725 aaPredicted RBP25.72■■□□□ 1.71
TRAF4-204ENST00000422344 GPCPD1Q9NPB8 672 aa25.72■■□□□ 1.71
TRAF4-204ENST00000422344 HOMER2Q9NSB8 354 aa25.72■■□□□ 1.71
TRAF4-204ENST00000422344 DDX20Q9UHI6 824 aaKnown RBP25.72■■□□□ 1.71
TRAF4-204ENST00000422344 CUL9Q8IWT3 2517 aa25.71■■□□□ 1.71
TRAF4-204ENST00000422344 IGHA2P01877 340 aa25.71■■□□□ 1.71
TRAF4-204ENST00000422344 PDHBP11177 359 aa25.71■■□□□ 1.71
TRAF4-204ENST00000422344 CYBAP13498 195 aa25.71■■□□□ 1.71
TRAF4-204ENST00000422344 MDM2Q00987 491 aaPredicted RBP25.71■■□□□ 1.71
TRAF4-204ENST00000422344 ZNF792Q3KQV3 632 aa25.71■■□□□ 1.71
TRAF4-204ENST00000422344 UBAC1Q9BSL1 405 aa25.71■■□□□ 1.71
TRAF4-204ENST00000422344 KAT14Q9H8E8 782 aa25.71■■□□□ 1.71
TRAF4-204ENST00000422344 FRMPD3Q5JV73 1810 aa25.71■■□□□ 1.71
TRAF4-204ENST00000422344 ZNFX1Q9P2E3 1918 aaKnown RBP25.71■■□□□ 1.71
TRAF4-204ENST00000422344 PTH1RQ03431 593 aa25.7■■□□□ 1.7
TRAF4-204ENST00000422344 TKFCQ3LXA3 575 aa25.7■■□□□ 1.7
TRAF4-204ENST00000422344 SYDE2Q5VT97 1194 aa25.7■■□□□ 1.7
TRAF4-204ENST00000422344 TTBK2Q6IQ55 1244 aa25.7■■□□□ 1.7
TRAF4-204ENST00000422344 KIAA1211Q6ZU35 1233 aa25.7■■□□□ 1.7
TRAF4-204ENST00000422344 AGBL1Q96MI9 1066 aa25.7■■□□□ 1.7
TRAF4-204ENST00000422344 ACAD9Q9H845 621 aa25.7■■□□□ 1.7
TRAF4-204ENST00000422344 ZSWIM5Q9P217 1185 aa25.7■■□□□ 1.7
TRAF4-204ENST00000422344 SLC16A2P36021 539 aa25.69■■□□□ 1.7
TRAF4-204ENST00000422344 SNAP25P60880 206 aa25.69■■□□□ 1.7
TRAF4-204ENST00000422344 TRPV1Q8NER1 839 aa25.69■■□□□ 1.7
TRAF4-204ENST00000422344 TINF2Q9BSI4 451 aa25.69■■□□□ 1.7
TRAF4-204ENST00000422344 SENP6Q9GZR1 1112 aaPredicted RBP25.69■■□□□ 1.7
TRAF4-204ENST00000422344 RNF146Q9NTX7 359 aa25.69■■□□□ 1.7
TRAF4-204ENST00000422344 ZNF536O15090 1300 aa25.68■■□□□ 1.7
TRAF4-204ENST00000422344 TNKSO95271 1327 aa25.68■■□□□ 1.7
TRAF4-204ENST00000422344 ALAS1P13196 640 aa25.68■■□□□ 1.7
TRAF4-204ENST00000422344 ZNF543Q08ER8 600 aa25.68■■□□□ 1.7
TRAF4-204ENST00000422344 BTNL9Q6UXG8 535 aa25.68■■□□□ 1.7
TRAF4-204ENST00000422344 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.68■■□□□ 1.7
TRAF4-204ENST00000422344 PNMA1Q8ND90 353 aa25.68■■□□□ 1.7
TRAF4-204ENST00000422344 MTMR10Q9NXD2 777 aa25.68■■□□□ 1.7
TRAF4-204ENST00000422344 NRBP1Q9UHY1 535 aa25.68■■□□□ 1.7
TRAF4-204ENST00000422344 CCPG1Q9ULG6 757 aa25.68■■□□□ 1.7
TRAF4-204ENST00000422344 PLXNA1Q9UIW2 1896 aa25.68■■□□□ 1.7
TRAF4-204ENST00000422344 SEPT4O43236 478 aa25.67■■□□□ 1.7
TRAF4-204ENST00000422344 CYP21A2P08686 494 aa25.67■■□□□ 1.7
TRAF4-204ENST00000422344 BMP2KLQ5H9B9 411 aa25.67■■□□□ 1.7
TRAF4-204ENST00000422344 PRAMEF19Q5SWL8 479 aa25.67■■□□□ 1.7
TRAF4-204ENST00000422344 TRERF1Q96PN7 1200 aa25.67■■□□□ 1.7
TRAF4-204ENST00000422344 RANBP17Q9H2T7 1088 aaKnown RBP25.67■■□□□ 1.7
TRAF4-204ENST00000422344 CNPY2Q9Y2B0 182 aa25.67■■□□□ 1.7
TRAF4-204ENST00000422344 STXBP5LQ9Y2K9 1186 aa25.67■■□□□ 1.7
TRAF4-204ENST00000422344 LAMA2P24043 3122 aaKnown RBP25.66■■□□□ 1.7
TRAF4-204ENST00000422344 DNAJC25-GNG10A0A024R161 153 aa25.66■■□□□ 1.7
TRAF4-204ENST00000422344 ICAM1P05362 532 aa25.66■■□□□ 1.7
TRAF4-204ENST00000422344 SNHG28P0DPA3 235 aa25.66■■□□□ 1.7
TRAF4-204ENST00000422344 GPATCH4Q5T3I0 446 aaKnown RBP25.66■■□□□ 1.7
TRAF4-204ENST00000422344 RALYLQ86SE5 291 aaKnown RBP25.66■■□□□ 1.7
TRAF4-204ENST00000422344 SKAP1Q86WV1 359 aa25.66■■□□□ 1.7
TRAF4-204ENST00000422344 MSL3Q8N5Y2 521 aaKnown RBP25.66■■□□□ 1.7
TRAF4-204ENST00000422344 ENAHQ8N8S7 591 aaPredicted RBP25.66■■□□□ 1.7
TRAF4-204ENST00000422344 ANKS1AQ92625 1134 aa25.66■■□□□ 1.7
TRAF4-204ENST00000422344 IFIT1BQ5T764 474 aaKnown RBP25.65■■□□□ 1.7
TRAF4-204ENST00000422344 PNMA2Q9UL42 364 aa25.65■■□□□ 1.7
TRAF4-204ENST00000422344 POTEB2H3BUK9 544 aa25.64■■□□□ 1.7
TRAF4-204ENST00000422344 ATN1P54259 1190 aaPredicted RBP25.64■■□□□ 1.7
TRAF4-204ENST00000422344 ZNF467Q7Z7K2 595 aaPredicted RBP25.64■■□□□ 1.7
TRAF4-204ENST00000422344 MAP4K1Q92918 833 aa25.64■■□□□ 1.7
TRAF4-204ENST00000422344 RBM8AQ9Y5S9 174 aaKnown RBP25.64■■□□□ 1.7
TRAF4-204ENST00000422344 SYNGAP1Q96PV0 1343 aa25.63■■□□□ 1.69
TRAF4-204ENST00000422344 GOLGA8HP0CJ92 632 aa25.63■■□□□ 1.69
TRAF4-204ENST00000422344 ANO1Q5XXA6 986 aa25.63■■□□□ 1.69
TRAF4-204ENST00000422344 CASC1Q6TDU7 716 aa25.63■■□□□ 1.69
TRAF4-204ENST00000422344 ARRDC4Q8NCT1 418 aa25.63■■□□□ 1.69
TRAF4-204ENST00000422344 NCOA7Q8NI08 942 aa25.63■■□□□ 1.69
TRAF4-204ENST00000422344 LBHD1Q9BQE6 289 aaPredicted RBP25.63■■□□□ 1.69
TRAF4-204ENST00000422344 ESYT1Q9BSJ8 1104 aa25.63■■□□□ 1.69
TRAF4-204ENST00000422344 ERICH2A1L162 156 aa25.62■■□□□ 1.69
TRAF4-204ENST00000422344 MYCNP04198 464 aaPredicted RBP25.62■■□□□ 1.69
TRAF4-204ENST00000422344 MAMDC4Q6UXC1 1216 aa25.62■■□□□ 1.69
TRAF4-204ENST00000422344 CYB5R4Q7L1T6 521 aa25.62■■□□□ 1.69
TRAF4-204ENST00000422344 A1CFQ9NQ94 594 aaKnown RBP25.62■■□□□ 1.69
TRAF4-204ENST00000422344 E7EWF7 191 aa25.61■■□□□ 1.69
TRAF4-204ENST00000422344 DNM1LO00429 736 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms