RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 POTEB2H3BUK9 544 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 NMT2O60551 498 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 ICAM1P05362 532 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 BMP8BP34820 402 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 MNX1P50219 401 aaPredicted RBP10.15□□□□□ -0.78
MDC1-204ENST00000422266 MRPL12P52815 198 aaKnown RBP10.15□□□□□ -0.78
MDC1-204ENST00000422266 HAND2P61296 217 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 CHRDL2Q6WN34 429 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 KCTD1Q719H9 257 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 C7orf61Q8IZ16 206 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 NUP133Q8WUM0 1156 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 TRERF1Q96PN7 1200 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 UBAC1Q9BSL1 405 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 TSEN34Q9BSV6 310 aaKnown RBP10.15□□□□□ -0.78
MDC1-204ENST00000422266 KAT14Q9H8E8 782 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 XPNPEP3Q9NQH7 507 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 RNF146Q9NTX7 359 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 ADD3Q9UEY8 706 aaKnown RBP10.15□□□□□ -0.78
MDC1-204ENST00000422266 CCPG1Q9ULG6 757 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 PRR12Q9ULL5 1215 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 RIPK3Q9Y572 518 aa10.15□□□□□ -0.78
MDC1-204ENST00000422266 ERICH2A1L162 156 aa10.14□□□□□ -0.79
MDC1-204ENST00000422266 MOXD2PA6NHM9 499 aa10.14□□□□□ -0.79
MDC1-204ENST00000422266 DUSP11O75319 330 aaKnown RBP10.14□□□□□ -0.79
MDC1-204ENST00000422266 PDHBP11177 359 aa10.14□□□□□ -0.79
MDC1-204ENST00000422266 ALAS1P13196 640 aa10.14□□□□□ -0.79
MDC1-204ENST00000422266 TRAF1Q13077 416 aa10.14□□□□□ -0.79
MDC1-204ENST00000422266 SART3Q15020 963 aaKnown RBP10.14□□□□□ -0.79
MDC1-204ENST00000422266 ASPRV1Q53RT3 343 aa10.14□□□□□ -0.79
MDC1-204ENST00000422266 SYDE2Q5VT97 1194 aa10.14□□□□□ -0.79
MDC1-204ENST00000422266 C1orf53Q5VUE5 145 aa10.14□□□□□ -0.79
MDC1-204ENST00000422266 PCSK9Q8NBP7 692 aaKnown RBP10.14□□□□□ -0.79
MDC1-204ENST00000422266 TRPV1Q8NER1 839 aa10.14□□□□□ -0.79
MDC1-204ENST00000422266 ANKS1AQ92625 1134 aa10.14□□□□□ -0.79
MDC1-204ENST00000422266 ZSCAN10Q96SZ4 725 aaPredicted RBP10.14□□□□□ -0.79
MDC1-204ENST00000422266 LBHD1Q9BQE6 289 aaPredicted RBP10.14□□□□□ -0.79
MDC1-204ENST00000422266 RANBP17Q9H2T7 1088 aaKnown RBP10.14□□□□□ -0.79
MDC1-204ENST00000422266 INCENPQ9NQS7 918 aa10.14□□□□□ -0.79
MDC1-204ENST00000422266 HOMER2Q9NSB8 354 aa10.14□□□□□ -0.79
MDC1-204ENST00000422266 ZNFX1Q9P2E3 1918 aaKnown RBP10.13□□□□□ -0.79
MDC1-204ENST00000422266 WDR19Q8NEZ3 1342 aa10.13□□□□□ -0.79
MDC1-204ENST00000422266 KDM4AO75164 1064 aa10.13□□□□□ -0.79
MDC1-204ENST00000422266 ZNF865P0CJ78 1059 aaPredicted RBP10.13□□□□□ -0.79
MDC1-204ENST00000422266 SNHG28P0DPA3 235 aa10.13□□□□□ -0.79
MDC1-204ENST00000422266 ZNF543Q08ER8 600 aa10.13□□□□□ -0.79
MDC1-204ENST00000422266 ACVR2BQ13705 512 aa10.13□□□□□ -0.79
MDC1-204ENST00000422266 LRRC41Q15345 812 aa10.13□□□□□ -0.79
MDC1-204ENST00000422266 GJC2Q5T442 439 aaPredicted RBP10.13□□□□□ -0.79
MDC1-204ENST00000422266 KIAA1211Q6ZU35 1233 aa10.13□□□□□ -0.79
MDC1-204ENST00000422266 TBC1D10CQ8IV04 446 aa10.13□□□□□ -0.79
MDC1-204ENST00000422266 PNMA1Q8ND90 353 aa10.13□□□□□ -0.79
MDC1-204ENST00000422266 SEZ6LQ9BYH1 1024 aa10.13□□□□□ -0.79
MDC1-204ENST00000422266 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.13□□□□□ -0.79
MDC1-204ENST00000422266 MTMR7Q9Y216 660 aa10.13□□□□□ -0.79
MDC1-204ENST00000422266 ZNF536O15090 1300 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 NEDD4P46934 1319 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 MROH7Q68CQ1 1323 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 CEP290O15078 2479 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 MYCNP04198 464 aaPredicted RBP10.12□□□□□ -0.79
MDC1-204ENST00000422266 GSPT1P15170 499 aaKnown RBP10.12□□□□□ -0.79
MDC1-204ENST00000422266 CHMLP26374 656 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 PDE4AP27815 886 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 LRRC26Q2I0M4 334 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 PRAMEF19Q5SWL8 479 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 IFIT1BQ5T764 474 aaKnown RBP10.12□□□□□ -0.79
MDC1-204ENST00000422266 CCDC174Q6PII3 467 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 SLC39A5Q6ZMH5 540 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 CENPQQ7L2Z9 268 aaPredicted RBP10.12□□□□□ -0.79
MDC1-204ENST00000422266 ARMCX2Q7L311 632 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 RALYLQ86SE5 291 aaKnown RBP10.12□□□□□ -0.79
MDC1-204ENST00000422266 FAM133AQ8N9E0 248 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 AGBL1Q96MI9 1066 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 A1CFQ9NQ94 594 aaKnown RBP10.12□□□□□ -0.79
MDC1-204ENST00000422266 CYP39A1Q9NYL5 469 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 ZSWIM5Q9P217 1185 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 RBM27Q9P2N5 1060 aaKnown RBP10.12□□□□□ -0.79
MDC1-204ENST00000422266 ZHX1Q9UKY1 873 aaPredicted RBP10.12□□□□□ -0.79
MDC1-204ENST00000422266 PHF24Q9UPV7 400 aa10.12□□□□□ -0.79
MDC1-204ENST00000422266 B4E1Z4 1266 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 ZEB2O60315 1214 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 SNAI1O95863 264 aaPredicted RBP10.11□□□□□ -0.79
MDC1-204ENST00000422266 PARP1P09874 1014 aaKnown RBP10.11□□□□□ -0.79
MDC1-204ENST00000422266 CST5P28325 142 aaPredicted RBP10.11□□□□□ -0.79
MDC1-204ENST00000422266 FXR1P51114 621 aaKnown RBP eCLIP10.11□□□□□ -0.79
MDC1-204ENST00000422266 IRX6P78412 446 aaPredicted RBP10.11□□□□□ -0.79
MDC1-204ENST00000422266 SNX17Q15036 470 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 GPR153Q6NV75 609 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 CASC1Q6TDU7 716 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 NSMFQ6X4W1 530 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 MCF2L2Q86YR7 1114 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 CCDC144CPQ8IYA2 1237 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 RGS22Q8NE09 1264 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 DNERQ8NFT8 737 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 NCOA7Q8NI08 942 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 GLT1D1Q96MS3 346 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 GDF15Q99988 308 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 MTA3Q9BTC8 594 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 PRO3102Q9H379 93 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 VTA1Q9NP79 307 aa10.11□□□□□ -0.79
MDC1-204ENST00000422266 GPCPD1Q9NPB8 672 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms