RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 CATIPQ7Z7H3 387 aa23.79■■□□□ 1.4
USP48-205ENST00000421625 BCAS4Q8TDM0 211 aa23.79■■□□□ 1.4
USP48-205ENST00000421625 DMGDHQ9UI17 866 aaKnown RBP23.79■■□□□ 1.4
USP48-205ENST00000421625 ERLIN2O94905 339 aa23.79■■□□□ 1.4
USP48-205ENST00000421625 VEGFAP15692 232 aaPredicted RBP23.79■■□□□ 1.4
USP48-205ENST00000421625 STAT6P42226 847 aa23.79■■□□□ 1.4
USP48-205ENST00000421625 PPP2R5BQ15173 497 aa23.79■■□□□ 1.4
USP48-205ENST00000421625 TRIM47Q96LD4 638 aa23.79■■□□□ 1.4
USP48-205ENST00000421625 TTYH3Q9C0H2 523 aa23.79■■□□□ 1.4
USP48-205ENST00000421625 DEF6Q9H4E7 631 aa23.79■■□□□ 1.4
USP48-205ENST00000421625 KAT6BQ8WYB5 2073 aa23.78■■□□□ 1.4
USP48-205ENST00000421625 ANO9A1A5B4 782 aa23.78■■□□□ 1.4
USP48-205ENST00000421625 EBAG9O00559 213 aa23.78■■□□□ 1.4
USP48-205ENST00000421625 TRIM21P19474 475 aaKnown RBP23.78■■□□□ 1.4
USP48-205ENST00000421625 GNGT1P63211 74 aa23.78■■□□□ 1.4
USP48-205ENST00000421625 NKX1-1Q15270 411 aaPredicted RBP23.78■■□□□ 1.4
USP48-205ENST00000421625 LRRC1Q9BTT6 524 aa23.78■■□□□ 1.4
USP48-205ENST00000421625 EEF1GP26641 437 aaKnown RBP23.78■■□□□ 1.4
USP48-205ENST00000421625 PURBQ96QR8 312 aaKnown RBP23.78■■□□□ 1.4
USP48-205ENST00000421625 ASAP1Q9ULH1 1129 aa23.78■■□□□ 1.4
USP48-205ENST00000421625 MROH5Q6ZUA9 1318 aa23.77■■□□□ 1.4
USP48-205ENST00000421625 PDE8AO60658 829 aa23.77■■□□□ 1.4
USP48-205ENST00000421625 TROAPQ12815 778 aa23.77■■□□□ 1.4
USP48-205ENST00000421625 CREG2Q8IUH2 290 aa23.77■■□□□ 1.4
USP48-205ENST00000421625 SUGP1Q8IWZ8 645 aaKnown RBP23.77■■□□□ 1.4
USP48-205ENST00000421625 LRP2BPQ9P2M1 347 aa23.77■■□□□ 1.4
USP48-205ENST00000421625 SLC7A5Q01650 507 aa23.77■■□□□ 1.4
USP48-205ENST00000421625 KRT26Q7Z3Y9 468 aa23.77■■□□□ 1.4
USP48-205ENST00000421625 FAM107BQ9H098 131 aa23.77■■□□□ 1.4
USP48-205ENST00000421625 CNTNAP5Q8WYK1 1306 aa23.76■■□□□ 1.39
USP48-205ENST00000421625 EIF3HO15372 352 aaKnown RBP eCLIP23.76■■□□□ 1.391e-5■□□□□ 9.1
USP48-205ENST00000421625 IPO7O95373 1038 aaKnown RBP23.76■■□□□ 1.39
USP48-205ENST00000421625 SRGNP10124 158 aa23.76■■□□□ 1.39
USP48-205ENST00000421625 TMTC3Q6ZXV5 915 aa23.76■■□□□ 1.39
USP48-205ENST00000421625 SRBD1Q8N5C6 995 aaKnown RBP23.76■■□□□ 1.39
USP48-205ENST00000421625 THAP9Q9H5L6 903 aa23.76■■□□□ 1.39
USP48-205ENST00000421625 LRWD1Q9UFC0 647 aa23.76■■□□□ 1.39
USP48-205ENST00000421625 ZNF263O14978 683 aa23.76■■□□□ 1.39
USP48-205ENST00000421625 CYP7A1P22680 504 aa23.76■■□□□ 1.39
USP48-205ENST00000421625 DNM2P50570 870 aa23.76■■□□□ 1.39
USP48-205ENST00000421625 NLRP5P59047 1200 aa23.76■■□□□ 1.39
USP48-205ENST00000421625 SECISBP2LQ93073 1101 aaKnown RBP23.76■■□□□ 1.39
USP48-205ENST00000421625 PLIN2Q99541 437 aa23.76■■□□□ 1.39
USP48-205ENST00000421625 PYM1Q9BRP8 204 aaKnown RBP23.76■■□□□ 1.39
USP48-205ENST00000421625 ZNHIT6Q9NWK9 470 aaKnown RBP23.76■■□□□ 1.39
USP48-205ENST00000421625 SMARCAL1Q9NZC9 954 aa23.76■■□□□ 1.39
USP48-205ENST00000421625 MAGEC2Q9UBF1 373 aaPredicted RBP23.76■■□□□ 1.39
USP48-205ENST00000421625 IQSEC3Q9UPP2 1182 aaPredicted RBP23.76■■□□□ 1.39
USP48-205ENST00000421625 SAMM50Q9Y512 469 aa23.76■■□□□ 1.39
USP48-205ENST00000421625 ARAP2Q8WZ64 1704 aa23.75■■□□□ 1.39
USP48-205ENST00000421625 PP2D1A8MPX8 630 aa23.75■■□□□ 1.39
USP48-205ENST00000421625 MATR3P43243 847 aaKnown RBP eCLIP23.75■■□□□ 1.391e-8■■■□□ 17.7
USP48-205ENST00000421625 TUBGCP2Q9BSJ2 902 aa23.75■■□□□ 1.39
USP48-205ENST00000421625 EXOC1Q9NV70 894 aa23.75■■□□□ 1.39
USP48-205ENST00000421625 RBM28Q9NW13 759 aaKnown RBP23.75■■□□□ 1.39
USP48-205ENST00000421625 SNX12Q9UMY4 172 aa23.75■■□□□ 1.39
USP48-205ENST00000421625 CAPN6Q9Y6Q1 641 aa23.75■■□□□ 1.39
USP48-205ENST00000421625 PLEKP08567 350 aaPredicted RBP23.75■■□□□ 1.39
USP48-205ENST00000421625 NAALADL2Q58DX5 795 aa23.75■■□□□ 1.39
USP48-205ENST00000421625 AMOTL1Q8IY63 956 aa23.75■■□□□ 1.39
USP48-205ENST00000421625 TSEN2Q8NCE0 465 aaKnown RBP23.75■■□□□ 1.39
USP48-205ENST00000421625 ADAMTS2O95450 1211 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 FBXW10Q5XX13 1052 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 IQCEQ6IPM2 695 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 ANKRD18AQ8IVF6 992 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 MMGT1Q8N4V1 131 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 TMOD3Q9NYL9 352 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 KIF5AQ12840 1032 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 CCDC70Q6NSX1 233 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 TTI2Q6NXR4 508 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 ARL8AQ96BM9 186 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 PSMB7Q99436 277 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 SH3GL2Q99962 352 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 MLXIPQ9HAP2 919 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 DISC1Q9NRI5 854 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 GEMIN8Q9NWZ8 242 aaKnown RBP23.74■■□□□ 1.39
USP48-205ENST00000421625 EHD2Q9NZN4 543 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 KLRC4O43908 158 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 VAV2P52735 878 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 FKBP15Q5T1M5 1219 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 CCDC170Q8IYT3 715 aa23.74■■□□□ 1.39
USP48-205ENST00000421625 PCMTD1Q96MG8 357 aaPredicted RBP23.74■■□□□ 1.39
USP48-205ENST00000421625 NKRFO15226 690 aaKnown RBP eCLIP23.73■■□□□ 1.39
USP48-205ENST00000421625 ZBED6P86452 979 aa23.73■■□□□ 1.39
USP48-205ENST00000421625 TBC1D8BQ0IIM8 1120 aa23.73■■□□□ 1.39
USP48-205ENST00000421625 CCDC96Q2M329 555 aa23.73■■□□□ 1.39
USP48-205ENST00000421625 TTMPQ5BVD1 217 aa23.73■■□□□ 1.39
USP48-205ENST00000421625 MCTP2Q6DN12 878 aa23.73■■□□□ 1.39
USP48-205ENST00000421625 C4orf32Q8N8J7 132 aa23.73■■□□□ 1.39
USP48-205ENST00000421625 DUSP9Q99956 384 aaKnown RBP23.73■■□□□ 1.39
USP48-205ENST00000421625 ANAPC4Q9UJX5 808 aa23.73■■□□□ 1.39
USP48-205ENST00000421625 ABCA3Q99758 1704 aa23.73■■□□□ 1.39
USP48-205ENST00000421625 SHTN1A0MZ66 631 aa23.73■■□□□ 1.39
USP48-205ENST00000421625 GOLGA8KD6RF30 607 aa23.73■■□□□ 1.39
USP48-205ENST00000421625 FNBP4Q8N3X1 1017 aaPredicted RBP23.73■■□□□ 1.39
USP48-205ENST00000421625 PLCH1Q4KWH8 1693 aa23.73■■□□□ 1.39
USP48-205ENST00000421625 PSMA7O14818 248 aa23.72■■□□□ 1.39
USP48-205ENST00000421625 CXCR5P32302 372 aa23.72■■□□□ 1.39
USP48-205ENST00000421625 LONP1P36776 959 aaKnown RBP23.72■■□□□ 1.39
USP48-205ENST00000421625 SPATA4Q8NEY3 305 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 676.9 ms