RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 ANKRD20A12PQ8NF67 263 aa8.41□□□□□ -1.06
BDNF-209ENST00000420794 GMCL1Q96IK5 515 aa8.41□□□□□ -1.06
BDNF-209ENST00000420794 PANK2Q9BZ23 570 aa8.41□□□□□ -1.06
BDNF-209ENST00000420794 GUCY1A2P33402 732 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 MRE11P49959 708 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 EVX2Q03828 476 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 SLC39A14Q15043 492 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 NTRK3Q16288 839 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 TTBK2Q6IQ55 1244 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 OTUD5Q96G74 571 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 ZDHHC9Q9Y397 364 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 INPP5BP32019 993 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 FAM160A1Q05DH4 1040 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 STIM1Q13586 685 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 WWC2Q6AWC2 1192 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 MKL1Q969V6 931 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 LRRC27Q9C0I9 530 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 RCOR1Q9UKL0 485 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 ATRNL1Q5VV63 1379 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 PITPNM2Q9BZ72 1349 aa8.4□□□□□ -1.06
BDNF-209ENST00000420794 SHTN1A0MZ66 631 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 NEMFO60524 1076 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 HMGCS2P54868 508 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 FASTKD5Q7L8L6 764 aaKnown RBP8.4□□□□□ -1.07
BDNF-209ENST00000420794 CREBRFQ8IUR6 639 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 ACER1Q8TDN7 264 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 ZKSCAN4Q969J2 545 aaPredicted RBP8.4□□□□□ -1.07
BDNF-209ENST00000420794 PAGR1Q9BTK6 254 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 ANO10Q9NW15 660 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 PNMA3Q9UL41 463 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 IVNS1ABPQ9Y6Y0 642 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 USP17L15C9J2P7 530 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 USP17L13C9JLJ4 530 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 USP17L11C9JVI0 530 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 USP17L18D6R9N7 530 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 USP17L22D6RA61 530 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 USP17L17D6RBQ6 530 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 USP17L19D6RCP7 530 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 USP17L20D6RJB6 530 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 USP17L24Q0WX57 530 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 COL9A3Q14050 684 aaPredicted RBP8.4□□□□□ -1.07
BDNF-209ENST00000420794 CALCRLQ16602 461 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 CLEC17AQ6ZS10 378 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 IQUBQ8NA54 791 aa8.4□□□□□ -1.07
BDNF-209ENST00000420794 LAD1O00515 517 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 PPP6R2O75170 966 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 TPM2P07951 284 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 GCFC2P16383 781 aaKnown RBP8.39□□□□□ -1.07
BDNF-209ENST00000420794 STAT6P42226 847 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 ECE1P42892 770 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 AP3B2Q13367 1082 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 SH3BP5LQ7L8J4 393 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 CKAP2LQ8IYA6 745 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 RNF214Q8ND24 703 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 RASGRP4Q8TDF6 673 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 RPAP3Q9H6T3 665 aaPredicted RBP8.39□□□□□ -1.07
BDNF-209ENST00000420794 ELP3Q9H9T3 547 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 SAMM50Q9Y512 469 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 CLIC4Q9Y696 253 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 A0A1B0GVL5 298 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 TPM3P06753 285 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 YBX3P16989 372 aaKnown RBP eCLIP8.39□□□□□ -1.07
BDNF-209ENST00000420794 DDIT3P35638 169 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 ST3GAL1Q11201 340 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 RRAGBQ5VZM2 374 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 LINC00301Q8NCQ3 95 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 TBCKQ8TEA7 893 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 PHF20Q9BVI0 1012 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 JMJD4Q9H9V9 463 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 PRR12Q9ULL5 1215 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 RABGAP1Q9Y3P9 1069 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 STK24Q9Y6E0 443 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 ABCB11O95342 1321 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 U2AF2P26368 475 aaKnown RBP eCLIP8.39□□□□□ -1.07
BDNF-209ENST00000420794 TXKP42681 527 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 BACE1P56817 501 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 CCNA1P78396 465 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 COG2Q14746 738 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 CCDC84Q86UT8 332 aaPredicted RBP8.39□□□□□ -1.07
BDNF-209ENST00000420794 ERO1BQ86YB8 467 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 KIAA1683Q9H0B3 1180 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 RRAGCQ9HB90 399 aa8.39□□□□□ -1.07
BDNF-209ENST00000420794 FAM217BQ9NTX9 383 aaPredicted RBP8.39□□□□□ -1.07
BDNF-209ENST00000420794 AKAP11Q9UKA4 1901 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 GADD45BO75293 160 aaPredicted RBP8.38□□□□□ -1.07
BDNF-209ENST00000420794 PTGDRQ13258 359 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 DHX8Q14562 1220 aaKnown RBP8.38□□□□□ -1.07
BDNF-209ENST00000420794 ANKRD35Q8N283 1001 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 RIOX1Q9H6W3 641 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 GPBP1L1Q9HC44 474 aaPredicted RBP8.38□□□□□ -1.07
BDNF-209ENST00000420794 KCNH3Q9ULD8 1083 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 CCDC88AQ3V6T2 1871 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 A0A1W2PQ27 194 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 A0A1W2PQ64 194 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 A0A1W2PQD8 194 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 ADM5C9JUS6 153 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 CAVIN2O95810 425 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 OR52Z1P0C646 297 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 SNAP25P60880 206 aa8.38□□□□□ -1.07
BDNF-209ENST00000420794 ZSCAN23Q3MJ62 389 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms