RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRIM39-206ENST00000420746 TGS1Q96RS0 853 aaKnown RBP11.03□□□□□ -0.64
TRIM39-206ENST00000420746 SH2D4AQ9H788 454 aa11.03□□□□□ -0.64
TRIM39-206ENST00000420746 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.03□□□□□ -0.64
TRIM39-206ENST00000420746 CTNNA3Q9UI47 895 aa11.03□□□□□ -0.64
TRIM39-206ENST00000420746 ZNF214Q9UL59 606 aaPredicted RBP11.03□□□□□ -0.64
TRIM39-206ENST00000420746 CDK5RAP2Q96SN8 1893 aa11.03□□□□□ -0.64
TRIM39-206ENST00000420746 MYO15AQ9UKN7 3530 aa11.03□□□□□ -0.64
TRIM39-206ENST00000420746 PTPRZ1P23471 2315 aaPredicted RBP11.02□□□□□ -0.64
TRIM39-206ENST00000420746 TECTAO75443 2155 aa11.02□□□□□ -0.65
TRIM39-206ENST00000420746 PITPNM1O00562 1244 aa11.02□□□□□ -0.65
TRIM39-206ENST00000420746 MCAMP43121 646 aa11.02□□□□□ -0.65
TRIM39-206ENST00000420746 ID4P47928 161 aa11.02□□□□□ -0.65
TRIM39-206ENST00000420746 NUBP1P53384 320 aa11.02□□□□□ -0.65
TRIM39-206ENST00000420746 SPRED2Q7Z698 418 aa11.02□□□□□ -0.65
TRIM39-206ENST00000420746 DEFB128Q7Z7B8 93 aa11.02□□□□□ -0.65
TRIM39-206ENST00000420746 ADGRA1Q86SQ6 560 aa11.02□□□□□ -0.65
TRIM39-206ENST00000420746 PBXIP1Q96AQ6 731 aa11.02□□□□□ -0.65
TRIM39-206ENST00000420746 PABPC5Q96DU9 382 aaKnown RBP11.02□□□□□ -0.65
TRIM39-206ENST00000420746 ALDH8A1Q9H2A2 487 aaPredicted RBP11.02□□□□□ -0.65
TRIM39-206ENST00000420746 VCPKMTQ9H867 229 aa11.02□□□□□ -0.65
TRIM39-206ENST00000420746 MUTYHQ9UIF7 546 aa11.02□□□□□ -0.65
TRIM39-206ENST00000420746 TMEM221A6NGB7 291 aa11.01□□□□□ -0.65
TRIM39-206ENST00000420746 H3BQ06 376 aaPredicted RBP11.01□□□□□ -0.65
TRIM39-206ENST00000420746 M0R296 226 aa11.01□□□□□ -0.65
TRIM39-206ENST00000420746 VWA5AO00534 786 aa11.01□□□□□ -0.65
TRIM39-206ENST00000420746 UQCRFS1P1P0C7P4 283 aa11.01□□□□□ -0.65
TRIM39-206ENST00000420746 GABPAQ06546 454 aa11.01□□□□□ -0.65
TRIM39-206ENST00000420746 FSCN1Q16658 493 aaKnown RBP11.01□□□□□ -0.65
TRIM39-206ENST00000420746 TIGD5Q53EQ6 642 aa11.01□□□□□ -0.65
TRIM39-206ENST00000420746 KIAA1755Q5JYT7 1200 aa11.01□□□□□ -0.65
TRIM39-206ENST00000420746 TRIM67Q6ZTA4 783 aa11.01□□□□□ -0.65
TRIM39-206ENST00000420746 FBXL6Q8N531 539 aa11.01□□□□□ -0.65
TRIM39-206ENST00000420746 REPS2Q8NFH8 660 aa11.01□□□□□ -0.65
TRIM39-206ENST00000420746 ATOH1Q92858 354 aaPredicted RBP11.01□□□□□ -0.65
TRIM39-206ENST00000420746 MRPL38Q96DV4 380 aaKnown RBP11.01□□□□□ -0.65
TRIM39-206ENST00000420746 FAM86C1Q9NVL1 165 aa11.01□□□□□ -0.65
TRIM39-206ENST00000420746 PA2G4Q9UQ80 394 aaKnown RBP11.01□□□□□ -0.65
TRIM39-206ENST00000420746 HDAC5Q9UQL6 1122 aa11.01□□□□□ -0.65
TRIM39-206ENST00000420746 GNEQ9Y223 722 aaKnown RBP11.01□□□□□ -0.65
TRIM39-206ENST00000420746 TMX2Q9Y320 296 aa11.01□□□□□ -0.65
TRIM39-206ENST00000420746 KMT2BQ9UMN6 2715 aaPredicted RBP11.01□□□□□ -0.65
TRIM39-206ENST00000420746 EPG5Q9HCE0 2579 aa11.01□□□□□ -0.65
TRIM39-206ENST00000420746 LCHNA4D1U4 455 aa11□□□□□ -0.65
TRIM39-206ENST00000420746 KCNJ6P48051 423 aa11□□□□□ -0.65
TRIM39-206ENST00000420746 BEX3Q00994 111 aa11□□□□□ -0.65
TRIM39-206ENST00000420746 SMAD2Q15796 467 aaKnown RBP11□□□□□ -0.65
TRIM39-206ENST00000420746 PTPROQ16827 1216 aa11□□□□□ -0.65
TRIM39-206ENST00000420746 GORABQ5T7V8 394 aa11□□□□□ -0.65
TRIM39-206ENST00000420746 TMEM179Q6ZVK1 233 aa11□□□□□ -0.65
TRIM39-206ENST00000420746 ARMCX2Q7L311 632 aa11□□□□□ -0.65
TRIM39-206ENST00000420746 RNF135Q8IUD6 432 aa11□□□□□ -0.65
TRIM39-206ENST00000420746 DDX11Q96FC9 970 aa11□□□□□ -0.65
TRIM39-206ENST00000420746 RAD9AQ99638 391 aa11□□□□□ -0.65
TRIM39-206ENST00000420746 KATNBL1Q9H079 304 aa11□□□□□ -0.65
TRIM39-206ENST00000420746 ARHGEF10LQ9HCE6 1279 aa11□□□□□ -0.65
TRIM39-206ENST00000420746 PPP1R9AQ9ULJ8 1098 aa11□□□□□ -0.65
TRIM39-206ENST00000420746 ASTN1O14525 1302 aa11□□□□□ -0.65
TRIM39-206ENST00000420746 PARP14Q460N5 1801 aa11□□□□□ -0.65
TRIM39-206ENST00000420746 PRR23AA6NEV1 266 aa10.99□□□□□ -0.65
TRIM39-206ENST00000420746 NCK2O43639 380 aa10.99□□□□□ -0.65
TRIM39-206ENST00000420746 IQCF3P0C7M6 154 aa10.99□□□□□ -0.65
TRIM39-206ENST00000420746 USP5P45974 858 aa10.99□□□□□ -0.65
TRIM39-206ENST00000420746 TNFAIP2Q03169 654 aa10.99□□□□□ -0.65
TRIM39-206ENST00000420746 LRRFIP1Q32MZ4 808 aaKnown RBP10.99□□□□□ -0.65
TRIM39-206ENST00000420746 TMED8Q6PL24 325 aaPredicted RBP10.99□□□□□ -0.65
TRIM39-206ENST00000420746 TLK2Q86UE8 772 aa10.99□□□□□ -0.65
TRIM39-206ENST00000420746 NEUROD6Q96NK8 337 aa10.99□□□□□ -0.65
TRIM39-206ENST00000420746 TEX13BQ9BXU2 312 aa10.99□□□□□ -0.65
TRIM39-206ENST00000420746 Q9Y3F1 56 aa10.99□□□□□ -0.65
TRIM39-206ENST00000420746 COL11A1P12107 1806 aaPredicted RBP10.98□□□□□ -0.65
TRIM39-206ENST00000420746 KMT2EQ8IZD2 1858 aa10.98□□□□□ -0.65
TRIM39-206ENST00000420746 ZFHX4Q86UP3 3567 aa10.98□□□□□ -0.65
TRIM39-206ENST00000420746 LINC01553A4QN01 128 aa10.98□□□□□ -0.65
TRIM39-206ENST00000420746 GJB5O95377 273 aa10.98□□□□□ -0.65
TRIM39-206ENST00000420746 UBTFL1P0CB47 393 aaPredicted RBP10.98□□□□□ -0.65
TRIM39-206ENST00000420746 CYP2C9P11712 490 aa10.98□□□□□ -0.65
TRIM39-206ENST00000420746 WDR5P61964 334 aaKnown RBP10.98□□□□□ -0.65
TRIM39-206ENST00000420746 TFCP2Q12800 502 aa10.98□□□□□ -0.65
TRIM39-206ENST00000420746 ASCL5Q7RTU5 278 aa10.98□□□□□ -0.65
TRIM39-206ENST00000420746 SPICE1Q8N0Z3 855 aa10.98□□□□□ -0.65
TRIM39-206ENST00000420746 FGD4Q96M96 766 aa10.98□□□□□ -0.65
TRIM39-206ENST00000420746 FTOQ9C0B1 505 aaKnown RBP eCLIP10.98□□□□□ -0.65
TRIM39-206ENST00000420746 TRMT13Q9NUP7 481 aaKnown RBP10.98□□□□□ -0.65
TRIM39-206ENST00000420746 TRPC6Q9Y210 931 aa10.98□□□□□ -0.65
TRIM39-206ENST00000420746 MYH1P12882 1939 aa10.97□□□□□ -0.65
TRIM39-206ENST00000420746 RIF1Q5UIP0 2472 aaKnown RBP10.97□□□□□ -0.65
TRIM39-206ENST00000420746 MPHOSPH10O00566 681 aaKnown RBP10.97□□□□□ -0.65
TRIM39-206ENST00000420746 ATP2A1O14983 1001 aa10.97□□□□□ -0.65
TRIM39-206ENST00000420746 KRT37O76014 449 aa10.97□□□□□ -0.65
TRIM39-206ENST00000420746 NBL1P41271 181 aa10.97□□□□□ -0.65
TRIM39-206ENST00000420746 PLCD1P51178 756 aa10.97□□□□□ -0.65
TRIM39-206ENST00000420746 DYNLL1P63167 89 aaKnown RBP10.97□□□□□ -0.65
TRIM39-206ENST00000420746 ICA1Q05084 483 aa10.97□□□□□ -0.65
TRIM39-206ENST00000420746 RETREG2Q8NC44 543 aa10.97□□□□□ -0.65
TRIM39-206ENST00000420746 BANK1Q8NDB2 785 aa10.97□□□□□ -0.65
TRIM39-206ENST00000420746 FBXO22Q8NEZ5 403 aa10.97□□□□□ -0.65
TRIM39-206ENST00000420746 ZBED2Q9BTP6 218 aa10.97□□□□□ -0.65
TRIM39-206ENST00000420746 FSD1Q9BTV5 496 aa10.97□□□□□ -0.65
TRIM39-206ENST00000420746 AP5M1Q9H0R1 490 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms