RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 DIEXFQ68CQ4 756 aaKnown RBP15.4■□□□□ 0.06
LINC00339-203ENST00000420503 CCDC144CPQ8IYA2 1237 aa15.4■□□□□ 0.06
LINC00339-203ENST00000420503 OTUD7AQ8TE49 926 aaPredicted RBP15.4■□□□□ 0.06
LINC00339-203ENST00000420503 PPM1EQ8WY54 764 aa15.4■□□□□ 0.06
LINC00339-203ENST00000420503 TIFAQ96CG3 184 aa15.4■□□□□ 0.06
LINC00339-203ENST00000420503 TOX2Q96NM4 488 aa15.4■□□□□ 0.06
LINC00339-203ENST00000420503 PURBQ96QR8 312 aaKnown RBP15.4■□□□□ 0.06
LINC00339-203ENST00000420503 PBX4Q9BYU1 374 aa15.4■□□□□ 0.06
LINC00339-203ENST00000420503 UPF3AQ9H1J1 476 aaKnown RBP15.4■□□□□ 0.06
LINC00339-203ENST00000420503 ZNF576Q9H609 170 aa15.4■□□□□ 0.06
LINC00339-203ENST00000420503 INCENPQ9NQS7 918 aa15.4■□□□□ 0.06
LINC00339-203ENST00000420503 ECHDC1Q9NTX5 307 aa15.4■□□□□ 0.06
LINC00339-203ENST00000420503 CXXC1Q9P0U4 656 aaPredicted RBP15.4■□□□□ 0.06
LINC00339-203ENST00000420503 MOXD2PA6NHM9 499 aa15.39■□□□□ 0.05
LINC00339-203ENST00000420503 ATP2A1O14983 1001 aa15.39■□□□□ 0.05
LINC00339-203ENST00000420503 CYP2C18P33260 490 aa15.39■□□□□ 0.05
LINC00339-203ENST00000420503 COPB2P35606 906 aa15.39■□□□□ 0.05
LINC00339-203ENST00000420503 FAM126BQ8IXS8 530 aa15.39■□□□□ 0.05
LINC00339-203ENST00000420503 ANKRD35Q8N283 1001 aa15.39■□□□□ 0.05
LINC00339-203ENST00000420503 KBTBD3Q8NAB2 608 aa15.39■□□□□ 0.05
LINC00339-203ENST00000420503 PRPF38AQ8NAV1 312 aaKnown RBP15.39■□□□□ 0.05
LINC00339-203ENST00000420503 APPBP2Q92624 585 aa15.39■□□□□ 0.05
LINC00339-203ENST00000420503 AGBL1Q96MI9 1066 aa15.39■□□□□ 0.05
LINC00339-203ENST00000420503 PRDM12Q9H4Q4 367 aa15.39■□□□□ 0.05
LINC00339-203ENST00000420503 MTMR4Q9NYA4 1195 aa15.39■□□□□ 0.05
LINC00339-203ENST00000420503 ZNF536O15090 1300 aa15.39■□□□□ 0.05
LINC00339-203ENST00000420503 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.38■□□□□ 0.05
LINC00339-203ENST00000420503 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.38■□□□□ 0.05
LINC00339-203ENST00000420503 SOWAHBA6NEL2 793 aa15.38■□□□□ 0.05
LINC00339-203ENST00000420503 RNF113AO15541 343 aaKnown RBP15.38■□□□□ 0.05
LINC00339-203ENST00000420503 ZBED4O75132 1171 aa15.38■□□□□ 0.05
LINC00339-203ENST00000420503 CST5P28325 142 aaPredicted RBP15.38■□□□□ 0.05
LINC00339-203ENST00000420503 TDO2P48775 406 aa15.38■□□□□ 0.05
LINC00339-203ENST00000420503 ADGRE1Q14246 886 aa15.38■□□□□ 0.05
LINC00339-203ENST00000420503 GNASQ5JWF2 1037 aa15.38■□□□□ 0.05
LINC00339-203ENST00000420503 RASIP1Q5U651 963 aa15.38■□□□□ 0.05
LINC00339-203ENST00000420503 MFSD5Q6N075 450 aa15.38■□□□□ 0.05
LINC00339-203ENST00000420503 ZSCAN25Q6NSZ9 544 aa15.38■□□□□ 0.05
LINC00339-203ENST00000420503 CXCL17Q6UXB2 119 aa15.38■□□□□ 0.05
LINC00339-203ENST00000420503 ZNF365Q70YC5 407 aa15.38■□□□□ 0.05
LINC00339-203ENST00000420503 NUP133Q8WUM0 1156 aa15.38■□□□□ 0.05
LINC00339-203ENST00000420503 VTI1AQ96AJ9 217 aa15.38■□□□□ 0.05
LINC00339-203ENST00000420503 GLT1D1Q96MS3 346 aa15.38■□□□□ 0.05
LINC00339-203ENST00000420503 PDGFCQ9NRA1 345 aa15.38■□□□□ 0.05
LINC00339-203ENST00000420503 ISY1Q9ULR0 285 aaKnown RBP15.38■□□□□ 0.05
LINC00339-203ENST00000420503 CHD7Q9P2D1 2997 aa15.38■□□□□ 0.05
LINC00339-203ENST00000420503 ARVCFO00192 962 aa15.37■□□□□ 0.05
LINC00339-203ENST00000420503 FOXP2O15409 715 aa15.37■□□□□ 0.05
LINC00339-203ENST00000420503 NMT2O60551 498 aa15.37■□□□□ 0.05
LINC00339-203ENST00000420503 APPP05067 770 aa15.37■□□□□ 0.05
LINC00339-203ENST00000420503 GJA9P57773 515 aa15.37■□□□□ 0.05
LINC00339-203ENST00000420503 SLFN13Q68D06 897 aa15.37■□□□□ 0.05
LINC00339-203ENST00000420503 ZNF467Q7Z7K2 595 aaPredicted RBP15.37■□□□□ 0.05
LINC00339-203ENST00000420503 MSL3Q8N5Y2 521 aaKnown RBP15.37■□□□□ 0.05
LINC00339-203ENST00000420503 FAM133AQ8N9E0 248 aa15.37■□□□□ 0.05
LINC00339-203ENST00000420503 A1CFQ9NQ94 594 aaKnown RBP15.37■□□□□ 0.05
LINC00339-203ENST00000420503 RAPGEFL1Q9UHV5 662 aa15.37■□□□□ 0.05
LINC00339-203ENST00000420503 GRIN2DO15399 1336 aa15.37■□□□□ 0.05
LINC00339-203ENST00000420503 ELP1O95163 1332 aa15.37■□□□□ 0.05
LINC00339-203ENST00000420503 TMEM265A0A087WTH1 108 aa15.36■□□□□ 0.05
LINC00339-203ENST00000420503 A0A0U1RQG5 324 aaPredicted RBP15.36■□□□□ 0.05
LINC00339-203ENST00000420503 TMEM232C9JQI7 657 aa15.36■□□□□ 0.05
LINC00339-203ENST00000420503 MS4A1P11836 297 aa15.36■□□□□ 0.05
LINC00339-203ENST00000420503 PSMC6P62333 389 aa15.36■□□□□ 0.05
LINC00339-203ENST00000420503 MUM1L1Q5H9M0 696 aa15.36■□□□□ 0.05
LINC00339-203ENST00000420503 CCDC129Q6ZRS4 1044 aa15.36■□□□□ 0.05
LINC00339-203ENST00000420503 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.36■□□□□ 0.05
LINC00339-203ENST00000420503 EEPD1Q7L9B9 569 aa15.36■□□□□ 0.05
LINC00339-203ENST00000420503 IFNL3Q8IZI9 196 aa15.36■□□□□ 0.05
LINC00339-203ENST00000420503 PPP1R13LQ8WUF5 828 aa15.36■□□□□ 0.05
LINC00339-203ENST00000420503 MKL1Q969V6 931 aa15.36■□□□□ 0.05
LINC00339-203ENST00000420503 VWCEQ96DN2 955 aa15.36■□□□□ 0.05
LINC00339-203ENST00000420503 ABHD16BQ9H3Z7 469 aa15.36■□□□□ 0.05
LINC00339-203ENST00000420503 RNF146Q9NTX7 359 aa15.36■□□□□ 0.05
LINC00339-203ENST00000420503 FEM1BQ9UK73 627 aa15.36■□□□□ 0.05
LINC00339-203ENST00000420503 RCAN3Q9UKA8 241 aa15.36■□□□□ 0.05
LINC00339-203ENST00000420503 YBX2Q9Y2T7 364 aaKnown RBP15.36■□□□□ 0.05
LINC00339-203ENST00000420503 NCOR1O75376 2440 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 TTLL1O95922 423 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 CD4P01730 458 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 BMP3P12645 472 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 SMPD1P17405 629 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 MCCP23508 829 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 CCDC85BQ15834 202 aaPredicted RBP15.35■□□□□ 0.05
LINC00339-203ENST00000420503 GIMAP6Q6P9H5 292 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 CCDC174Q6PII3 467 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 KCTD1Q719H9 257 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 NOL8Q76FK4 1167 aaKnown RBP15.35■□□□□ 0.05
LINC00339-203ENST00000420503 FBXO16Q8IX29 292 aaPredicted RBP15.35■□□□□ 0.05
LINC00339-203ENST00000420503 ZNF444Q8N0Y2 327 aaPredicted RBP15.35■□□□□ 0.05
LINC00339-203ENST00000420503 GMCL1P1Q8NEA9 526 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 CHST13Q8NET6 341 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 NEDD1Q8NHV4 660 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 TRPV6Q9H1D0 765 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 NKX2-4Q9H2Z4 354 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 MTMR7Q9Y216 660 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 GNEQ9Y223 722 aaKnown RBP15.35■□□□□ 0.05
LINC00339-203ENST00000420503 CTDP1Q9Y5B0 961 aaPredicted RBP15.35■□□□□ 0.05
LINC00339-203ENST00000420503 PLIN4Q96Q06 1357 aa15.35■□□□□ 0.05
LINC00339-203ENST00000420503 MYOGP15173 224 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms