RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 ACAD9Q9H845 621 aa20.49■□□□□ 0.87
PTCD1-202ENST00000419981 TACC3Q9Y6A5 838 aa20.49■□□□□ 0.87
PTCD1-202ENST00000419981 LAMA2P24043 3122 aaKnown RBP20.48■□□□□ 0.87
PTCD1-202ENST00000419981 MOXD2PA6NHM9 499 aa20.48■□□□□ 0.87
PTCD1-202ENST00000419981 PQBP1O60828 265 aaKnown RBP20.48■□□□□ 0.87
PTCD1-202ENST00000419981 MCCP23508 829 aa20.48■□□□□ 0.87
PTCD1-202ENST00000419981 ACLYP53396 1101 aa20.48■□□□□ 0.87
PTCD1-202ENST00000419981 PDE1AP54750 535 aa20.48■□□□□ 0.87
PTCD1-202ENST00000419981 ACVR2BQ13705 512 aa20.48■□□□□ 0.87
PTCD1-202ENST00000419981 SHHQ15465 462 aa20.48■□□□□ 0.87
PTCD1-202ENST00000419981 FAM109BQ6ICB4 259 aaPredicted RBP20.48■□□□□ 0.87
PTCD1-202ENST00000419981 ARMCX2Q7L311 632 aa20.48■□□□□ 0.87
PTCD1-202ENST00000419981 NUP133Q8WUM0 1156 aa20.48■□□□□ 0.87
PTCD1-202ENST00000419981 STARD7Q9NQZ5 370 aa20.48■□□□□ 0.87
PTCD1-202ENST00000419981 ANAPC4Q9UJX5 808 aa20.48■□□□□ 0.87
PTCD1-202ENST00000419981 POTEB2H3BUK9 544 aa20.47■□□□□ 0.87
PTCD1-202ENST00000419981 RANBP6O60518 1105 aaKnown RBP20.47■□□□□ 0.87
PTCD1-202ENST00000419981 HDAC1Q13547 482 aaPredicted RBP20.47■□□□□ 0.87
PTCD1-202ENST00000419981 C9orf50Q5SZB4 431 aa20.47■□□□□ 0.87
PTCD1-202ENST00000419981 VPS53Q5VIR6 699 aa20.47■□□□□ 0.87
PTCD1-202ENST00000419981 KLHDC9Q8NEP7 349 aa20.47■□□□□ 0.87
PTCD1-202ENST00000419981 INCENPQ9NQS7 918 aa20.47■□□□□ 0.87
PTCD1-202ENST00000419981 IL17RBQ9NRM6 502 aa20.47■□□□□ 0.87
PTCD1-202ENST00000419981 HELLSQ9NRZ9 838 aa20.47■□□□□ 0.87
PTCD1-202ENST00000419981 RNF146Q9NTX7 359 aa20.47■□□□□ 0.87
PTCD1-202ENST00000419981 GBF1Q92538 1859 aa20.47■□□□□ 0.87
PTCD1-202ENST00000419981 ZNF536O15090 1300 aa20.47■□□□□ 0.87
PTCD1-202ENST00000419981 NMT2O60551 498 aa20.46■□□□□ 0.87
PTCD1-202ENST00000419981 PLA2G6O60733 806 aa20.46■□□□□ 0.87
PTCD1-202ENST00000419981 C6orf222P0C671 652 aaPredicted RBP20.46■□□□□ 0.87
PTCD1-202ENST00000419981 CST5P28325 142 aaPredicted RBP20.46■□□□□ 0.87
PTCD1-202ENST00000419981 KCNA10Q16322 511 aa20.46■□□□□ 0.87
PTCD1-202ENST00000419981 TKFCQ3LXA3 575 aa20.46■□□□□ 0.87
PTCD1-202ENST00000419981 CCDC144BQ3MJ40 725 aa20.46■□□□□ 0.87
PTCD1-202ENST00000419981 RCSD1Q6JBY9 416 aa20.46■□□□□ 0.87
PTCD1-202ENST00000419981 KCTD1Q719H9 257 aa20.46■□□□□ 0.87
PTCD1-202ENST00000419981 CCDC144CPQ8IYA2 1237 aa20.46■□□□□ 0.87
PTCD1-202ENST00000419981 AGBL1Q96MI9 1066 aa20.46■□□□□ 0.87
PTCD1-202ENST00000419981 SPC25Q9HBM1 224 aa20.46■□□□□ 0.87
PTCD1-202ENST00000419981 MYADML2A6NDP7 307 aa20.45■□□□□ 0.86
PTCD1-202ENST00000419981 KIAA0355O15063 1070 aa20.45■□□□□ 0.86
PTCD1-202ENST00000419981 RAG1P15918 1043 aa20.45■□□□□ 0.86
PTCD1-202ENST00000419981 CNTN2Q02246 1040 aa20.45■□□□□ 0.86
PTCD1-202ENST00000419981 ALX1Q15699 326 aa20.45■□□□□ 0.86
PTCD1-202ENST00000419981 ZNF697Q5TEC3 545 aa20.45■□□□□ 0.86
PTCD1-202ENST00000419981 CCSAPQ6IQ19 270 aaPredicted RBP20.45■□□□□ 0.86
PTCD1-202ENST00000419981 ANKRD33Q7Z3H0 272 aa20.45■□□□□ 0.86
PTCD1-202ENST00000419981 FAM133AQ8N9E0 248 aa20.45■□□□□ 0.86
PTCD1-202ENST00000419981 PCSK9Q8NBP7 692 aaKnown RBP20.45■□□□□ 0.86
PTCD1-202ENST00000419981 A1CFQ9NQ94 594 aaKnown RBP20.45■□□□□ 0.86
PTCD1-202ENST00000419981 A0A0D9SFI3 127 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 DCDC2CA8MYV0 355 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 ADCY6O43306 1168 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 ORC4O43929 436 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 ALAS1P13196 640 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 ITGB8P26012 769 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 MCMDC2Q4G0Z9 681 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 CCDC174Q6PII3 467 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 FAM227BQ96M60 508 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 GLT1D1Q96MS3 346 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 TOX2Q96NM4 488 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 TRERF1Q96PN7 1200 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 UPF3AQ9H1J1 476 aaKnown RBP20.44■□□□□ 0.86
PTCD1-202ENST00000419981 TOMM22Q9NS69 142 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 TMEM39AQ9NV64 488 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 PRR12Q9ULL5 1215 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 MTMR7Q9Y216 660 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 MROH7Q68CQ1 1323 aa20.44■□□□□ 0.86
PTCD1-202ENST00000419981 ASGR1P07306 291 aa20.43■□□□□ 0.86
PTCD1-202ENST00000419981 GJA9P57773 515 aa20.43■□□□□ 0.86
PTCD1-202ENST00000419981 CCDC96Q2M329 555 aa20.43■□□□□ 0.86
PTCD1-202ENST00000419981 RASGRP2Q7LDG7 609 aa20.43■□□□□ 0.86
PTCD1-202ENST00000419981 TICAM2Q86XR7 235 aa20.43■□□□□ 0.86
PTCD1-202ENST00000419981 DCAF4Q8WV16 495 aa20.43■□□□□ 0.86
PTCD1-202ENST00000419981 FAM161BQ96MY7 647 aa20.43■□□□□ 0.86
PTCD1-202ENST00000419981 KATNBL1Q9H079 304 aa20.43■□□□□ 0.86
PTCD1-202ENST00000419981 ELP1O95163 1332 aa20.43■□□□□ 0.86
PTCD1-202ENST00000419981 ASB14A6NK59 587 aa20.42■□□□□ 0.86
PTCD1-202ENST00000419981 FGRP09769 529 aa20.42■□□□□ 0.86
PTCD1-202ENST00000419981 NOVP48745 357 aa20.42■□□□□ 0.86
PTCD1-202ENST00000419981 SNAP25P60880 206 aa20.42■□□□□ 0.86
PTCD1-202ENST00000419981 IRX5P78411 483 aaPredicted RBP20.42■□□□□ 0.86
PTCD1-202ENST00000419981 FAAP100Q0VG06 881 aa20.42■□□□□ 0.86
PTCD1-202ENST00000419981 RRP12Q5JTH9 1297 aaKnown RBP20.42■□□□□ 0.86
PTCD1-202ENST00000419981 GUCD1Q96NT3 240 aa20.42■□□□□ 0.86
PTCD1-202ENST00000419981 KIAA1217Q5T5P2 1943 aa20.42■□□□□ 0.86
PTCD1-202ENST00000419981 ZMYM6O95789 1325 aa20.42■□□□□ 0.86
PTCD1-202ENST00000419981 SOWAHBA6NEL2 793 aa20.41■□□□□ 0.86
PTCD1-202ENST00000419981 TRIM6-TRIM34B2RNG4 842 aa20.41■□□□□ 0.86
PTCD1-202ENST00000419981 FGAP02671 866 aa20.41■□□□□ 0.86
PTCD1-202ENST00000419981 HSPD1P10809 573 aaKnown RBP20.41■□□□□ 0.86
PTCD1-202ENST00000419981 FPGSQ05932 587 aa20.41■□□□□ 0.86
PTCD1-202ENST00000419981 GNASQ5JWF2 1037 aa20.41■□□□□ 0.86
PTCD1-202ENST00000419981 VTI1AQ96AJ9 217 aa20.41■□□□□ 0.86
PTCD1-202ENST00000419981 RNPC3Q96LT9 517 aaKnown RBP20.41■□□□□ 0.86
PTCD1-202ENST00000419981 LNPKQ9C0E8 428 aa20.41■□□□□ 0.86
PTCD1-202ENST00000419981 CCPG1Q9ULG6 757 aa20.41■□□□□ 0.86
PTCD1-202ENST00000419981 A0A0U1RQG5 324 aaPredicted RBP20.4■□□□□ 0.86
PTCD1-202ENST00000419981 DLL1O00548 723 aa20.4■□□□□ 0.86
PTCD1-202ENST00000419981 SMAD3P84022 425 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms