RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 GJB4Q9NTQ9 266 aa11.56□□□□□ -0.56
HMGA1P6-201ENST00000418454 DDX19AQ9NUU7 478 aaKnown RBP11.56□□□□□ -0.56
HMGA1P6-201ENST00000418454 HOXC10Q9NYD6 342 aa11.56□□□□□ -0.56
HMGA1P6-201ENST00000418454 ADAMTS5Q9UNA0 930 aa11.56□□□□□ -0.56
HMGA1P6-201ENST00000418454 MRPL11Q9Y3B7 192 aaKnown RBP11.56□□□□□ -0.56
HMGA1P6-201ENST00000418454 RABGAP1Q9Y3P9 1069 aa11.56□□□□□ -0.56
HMGA1P6-201ENST00000418454 PCDHA1Q9Y5I3 950 aa11.56□□□□□ -0.56
HMGA1P6-201ENST00000418454 SRPRBQ9Y5M8 271 aaKnown RBP11.56□□□□□ -0.56
HMGA1P6-201ENST00000418454 UBE2Q2LH0YL09 131 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 ATP2A1O14983 1001 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 PPFIA3O75145 1194 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 GCFC2P16383 781 aaKnown RBP11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 PTPREP23469 700 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 PRPHP41219 470 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 NR5A1Q13285 461 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 NONOQ15233 471 aaKnown RBP eCLIP11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 QRICH1Q2TAL8 776 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 LDLRAD1Q5T700 205 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 PPP4R3AQ6IN85 833 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 FAM173BQ6P4H8 233 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 LDHDQ86WU2 507 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 CLEC10AQ8IUN9 316 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 REXO1Q8N1G1 1221 aaKnown RBP11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 PROCA1Q8NCQ7 364 aaPredicted RBP11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 GPT2Q8TD30 523 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 CDCA5Q96FF9 252 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 TIGD1Q96MW7 591 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 SLF1Q9BQI6 1058 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 EMILIN3Q9NT22 766 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 TMOD4Q9NZQ9 345 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 ABCB11O95342 1321 aa11.55□□□□□ -0.56
HMGA1P6-201ENST00000418454 MYH4Q9Y623 1939 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 SLC26A4O43511 780 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 ICAM1P05362 532 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 HOXA7P31268 230 aaPredicted RBP11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 ME1P48163 572 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 ZNF445P59923 1031 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 SPP2Q13103 211 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 COG2Q14746 738 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 SHROOM1Q2M3G4 852 aaPredicted RBP11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 TKFCQ3LXA3 575 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 FAM83BQ5T0W9 1011 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 CCDC183Q5T5S1 534 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 TYW1BQ6NUM6 668 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 HOMER1Q86YM7 354 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 MCF2L2Q86YR7 1114 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 KRI1Q8N9T8 703 aaKnown RBP11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 OXER1Q8TDS5 423 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 PGBD1Q96JS3 809 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 PCDHA7Q9UN72 937 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 MTMR7Q9Y216 660 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 CLIC4Q9Y696 253 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 ZHX2Q9Y6X8 837 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 SSC5DA1L4H1 1573 aa11.54□□□□□ -0.56
HMGA1P6-201ENST00000418454 CYP3A7-CYP3A51PA0A087WV96 503 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 hCG_1642624A0A1W2PR95 340 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 SPDYE5A6NIY4 337 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 USP17L15C9J2P7 530 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 USP17L13C9JLJ4 530 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 USP17L11C9JVI0 530 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 USP17L18D6R9N7 530 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 USP17L22D6RA61 530 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 USP17L17D6RBQ6 530 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 USP17L19D6RCP7 530 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 USP17L20D6RJB6 530 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 DTNBO60941 627 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 ZBED4O75132 1171 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 CYP3A7P24462 503 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 SLC16A2P36021 539 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 ATP2C1P98194 919 aaPredicted RBP11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 FAM160A1Q05DH4 1040 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 USP17L24Q0WX57 530 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 IKQ13123 557 aaPredicted RBP11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 PABPC4Q13310 644 aaKnown RBP eCLIP11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 PPIL2Q13356 520 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 TTC38Q5R3I4 469 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 AXDND1Q5T1B0 1012 aaPredicted RBP11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 CATSPERGQ6ZRH7 1159 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 FASTKD5Q7L8L6 764 aaKnown RBP11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 NEK8Q86SG6 692 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 MB21D1Q8N884 522 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 GPKOWQ92917 476 aaPredicted RBP eCLIP11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 ZKSCAN4Q969J2 545 aaPredicted RBP11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 CCDC34Q96HJ3 373 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 EHMT1Q9H9B1 1298 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 SLC38A10Q9HBR0 1119 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 USP25Q9UHP3 1055 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 PPP1R9AQ9ULJ8 1098 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 KCNH4Q9UQ05 1017 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 SNCAIPQ9Y6H5 919 aa11.53□□□□□ -0.56
HMGA1P6-201ENST00000418454 PPP1R11O60927 126 aaPredicted RBP11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 GADD45BO75293 160 aaPredicted RBP11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 CAVIN2O95810 425 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 VCAM1P19320 739 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 LONP1P36776 959 aaKnown RBP11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 FOSBP53539 338 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 SEMA3FQ13275 785 aa11.52□□□□□ -0.57
HMGA1P6-201ENST00000418454 MTMR2Q13614 643 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms