RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ICA1Q05084 483 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 KIF5AQ12840 1032 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 NBPF9Q3BBW0 867 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 GRIPAP1Q4V328 841 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 LACTB2Q53H82 288 aaPredicted RBP8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 C8orf74Q6P047 294 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 PLPPR3Q6T4P5 718 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 COPS6Q7L5N1 327 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 SGMS1Q86VZ5 419 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 APPBP2Q92624 585 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 TMEM87BQ96K49 555 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 ORAI2Q96SN7 254 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 TSGA10Q9BZW7 698 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 KCNJ14Q9UNX9 436 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 TMEM94Q12767 1356 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 ANKRD33BA6NCL7 494 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 TCP1P17987 556 aaKnown RBP8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 RRAGBQ5VZM2 374 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 RASSF8Q8NHQ8 419 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 RSRC1Q96IZ7 334 aaKnown RBP8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 MYL6BP14649 208 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 IFNAR1P17181 557 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 MATR3P43243 847 aaKnown RBP eCLIP8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 SCTRP47872 440 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 NR5A1Q13285 461 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 LMBR1LQ6UX01 489 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 TBC1D10CQ8IV04 446 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 IFT20Q8IY31 132 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 KIRREL3Q8IZU9 778 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 IGDCC4Q8TDY8 1250 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 OSBPL9Q96SU4 736 aa8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 PUS7LQ9H0K6 701 aaKnown RBP8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 NHEJ1Q9H9Q4 299 aaPredicted RBP8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 ARFGEF2Q9Y6D5 1785 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 GMNCA6NCL1 334 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 GUCY1A2P33402 732 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 IL15P40933 162 aaPredicted RBP8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 CASP7P55210 303 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 FKBP4Q02790 459 aaKnown RBP eCLIP8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 TTLL7Q6ZT98 887 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 ANKRD13DQ6ZTN6 518 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 ARFGAP2Q8N6H7 521 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 ZNF507Q8TCN5 953 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 NELFBQ8WX92 580 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 P3H4Q92791 437 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 SYMPKQ92797 1274 aaKnown RBP8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 LY9Q9HBG7 655 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 GDF3Q9NR23 364 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 LTBP4Q8N2S1 1624 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 GPAA1O43292 621 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 PPP1R12BO60237 982 aaPredicted RBP8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 TACC1O75410 805 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 RPSAP08865 295 aaKnown RBP8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 AMOTQ4VCS5 1084 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 C1orf141Q5JVX7 400 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 NFXL1Q6ZNB6 911 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 IRF2BP1Q8IU81 584 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 IP6K1Q92551 441 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 MYL10Q9BUA6 226 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 PPANQ9NQ55 473 aaKnown RBP8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 SPATS2LQ9NUQ6 558 aaKnown RBP8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 HYOU1Q9Y4L1 999 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 CAPN6Q9Y6Q1 641 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 XDHP47989 1333 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 A0A087WZG4 1122 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 DNAJC8O75937 253 aaPredicted RBP8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 PARP1P09874 1014 aaKnown RBP8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 FAM153BP0C7A2 387 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 GCKP35557 465 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 PAK2Q13177 524 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 FAM153CQ494X1 144 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 SH3GL3Q99963 347 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 TTYH3Q9C0H2 523 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 ZNHIT6Q9NWK9 470 aaKnown RBP8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 VPS54Q9P1Q0 977 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 FAM153AQ9UHL3 310 aa8.92□□□□□ -0.98
HMGXB4-202ENST00000418170 PDS5AQ29RF7 1337 aaKnown RBP8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 H7C1D1 291 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 TRAPPC3O43617 180 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 SKAP2O75563 359 aaPredicted RBP8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 CARSP49589 748 aaKnown RBP8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 ADCY2Q08462 1091 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 CCDC181Q5TID7 509 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 CDCA2Q69YH5 1023 aaPredicted RBP8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 TATDN2Q93075 761 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 EBF2Q9HAK2 575 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 NFU1Q9UMS0 254 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 PLCH1Q4KWH8 1693 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 NID2Q14112 1375 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 C5orf60A6NFR6 353 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 OPLAHO14841 1288 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 CYP27A1Q02318 531 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 FKBP15Q5T1M5 1219 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 LEMD3Q9Y2U8 911 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 NUP188Q5SRE5 1749 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 NUTM2BA6NNL0 878 aaPredicted RBP8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 NUTM2EB1AL46 878 aaPredicted RBP8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 B4E1Z4 1266 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 ATP6V1G2O95670 118 aa8.91□□□□□ -0.98
HMGXB4-202ENST00000418170 GLI1P08151 1106 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms