RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 TNNI2P48788 182 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 TNFAIP1Q13829 316 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 SEPT2Q15019 361 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 NPY5RQ15761 445 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 PFKFB3Q16875 520 aaPredicted RBP9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 ABCB5Q2M3G0 1257 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 SHROOM1Q2M3G4 852 aaPredicted RBP9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 KRT40Q6A162 431 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 C17orf99Q6UX52 265 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 Q7L0L9 218 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 DEFB123Q8N688 67 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 GMCL1P1Q8NEA9 526 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 CTCFLQ8NI51 663 aaPredicted RBP9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 RAET1EQ8TD07 263 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 U2AF1L4Q8WU68 220 aaKnown RBP9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 CHAMP1Q96JM3 812 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 C8orf76Q96K31 380 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 SLC26A6Q9BXS9 759 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 RCOR1Q9UKL0 485 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 STXBP5LQ9Y2K9 1186 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 CSADQ9Y600 493 aa9.34□□□□□ -0.91
AP001042.1-201ENST00000416842 A0A1W2PRG0 241 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 FAM196BA6NMK8 535 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 DDX11L8A8MPP1 907 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 USP17L5A8MUK1 530 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 EVI5O60447 810 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 PPFIA3O75145 1194 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 EEF2P13639 858 aaKnown RBP9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 ZNF543Q08ER8 600 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 GPR153Q6NV75 609 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 BTNL9Q6UXG8 535 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 BRAPQ7Z569 592 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 ZSCAN29Q8IWY8 852 aaPredicted RBP9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 TRIM22Q8IYM9 498 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 CMTR1Q8N1G2 835 aaKnown RBP9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 TNFRSF25Q93038 417 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 GMCL1Q96IK5 515 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 ANP32EQ9BTT0 268 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 PHF20Q9BVI0 1012 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 UNC93B1Q9H1C4 597 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 SH3GLB2Q9NR46 395 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 GJB4Q9NTQ9 266 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 CPA4Q9UI42 421 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 STX8Q9UNK0 236 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 SNCAIPQ9Y6H5 919 aa9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 MORC2Q9Y6X9 1032 aaPredicted RBP9.33□□□□□ -0.92
AP001042.1-201ENST00000416842 ELP1O95163 1332 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 MYPNQ86TC9 1320 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 ADGRA2Q96PE1 1338 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 VPS37CA5D8V6 355 aaPredicted RBP9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 KIF28PB7ZC32 967 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 KLRF2D3W0D1 207 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 H3BQV1 296 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 M0R2N6 131 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 IRF6O14896 467 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 CTNND1O60716 968 aaKnown RBP9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 PLA2G6O60733 806 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 GH2P01242 217 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 MMP1P03956 469 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 PARP1P09874 1014 aaKnown RBP9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 HOXD10P28358 340 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 DNM1Q05193 864 aaKnown RBP9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 SKOR2Q2VWA4 1001 aaPredicted RBP9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 ASPRV1Q53RT3 343 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 FOXD4L5Q5VV16 416 aaPredicted RBP9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 USP17L2Q6R6M4 530 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 ERO1BQ86YB8 467 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 DCAF4Q8WV16 495 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 FOXD4L4Q8WXT5 416 aaPredicted RBP9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 GDF15Q99988 308 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 FOXP1Q9H334 677 aaPredicted RBP9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 MTMR10Q9NXD2 777 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 RTEL1Q9NZ71 1219 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 BIN2Q9UBW5 565 aaPredicted RBP9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 TMX2Q9Y320 296 aa9.32□□□□□ -0.92
AP001042.1-201ENST00000416842 PTPRFP10586 1907 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 F5H6K3 240 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 TRAK2O60296 914 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 SGPL1O95470 568 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 SCG2P13521 617 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 BMP8BP34820 402 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 CLCN6P51797 869 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 UBXN2AP68543 259 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 PRKCZQ05513 592 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 KLRC3Q07444 240 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 PPIL2Q13356 520 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 MKRN4PQ13434 485 aaPredicted RBP9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 SNAPC2Q13487 334 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 GPATCH4Q5T3I0 446 aaKnown RBP9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 MCTP1Q6DN14 999 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 FAM173BQ6P4H8 233 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 MIGA2Q7L4E1 593 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 FERMT3Q86UX7 667 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 CLEC10AQ8IUN9 316 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 CCDC82Q8N4S0 544 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 SCAND2PQ9GZW5 306 aaPredicted RBP9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 CABP5Q9NP86 173 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 ZBTB21Q9ULJ3 1066 aa9.31□□□□□ -0.92
AP001042.1-201ENST00000416842 CNPY2Q9Y2B0 182 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms