RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 MSL1Q68DK7 614 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 TMEM139Q8IV31 216 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 REXO1L1PQ8IX06 675 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 DAGLBQ8NCG7 672 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 RMND1Q9NWS8 449 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 TAB2Q9NYJ8 693 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 URI1O94763 535 aaPredicted RBP11.23□□□□□ -0.61
LINC00494-201ENST00000416742 PRCPP42785 496 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 ZNF658Q5TYW1 1059 aaPredicted RBP11.23□□□□□ -0.61
LINC00494-201ENST00000416742 TOGARAM2Q6ZUX3 1019 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 TBCKQ8TEA7 893 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 CTAGE1Q96RT6 745 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 ADD3Q9UEY8 706 aaKnown RBP11.23□□□□□ -0.61
LINC00494-201ENST00000416742 SPDYE4A6NLX3 237 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 STX10O60499 249 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 TECP42680 631 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 CDKAL1Q5VV42 579 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 APTXQ7Z2E3 356 aaKnown RBP11.23□□□□□ -0.61
LINC00494-201ENST00000416742 CABP7Q86V35 215 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 MTMR4Q9NYA4 1195 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 NAV1Q8NEY1 1877 aa11.23□□□□□ -0.61
LINC00494-201ENST00000416742 OR52Z1P0C646 297 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 MTF1Q14872 753 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 NAALADL2Q58DX5 795 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 NEK8Q86SG6 692 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 COL23A1Q86Y22 540 aaPredicted RBP11.22□□□□□ -0.61
LINC00494-201ENST00000416742 NLGN1Q8N2Q7 840 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 ANKRD20A12PQ8NF67 263 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 CCDC94Q9BW85 323 aaPredicted RBP11.22□□□□□ -0.61
LINC00494-201ENST00000416742 DBNDD1Q9H9R9 158 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 TRIM49BA6NDI0 452 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 SRGNP10124 158 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 PDHBP11177 359 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 TXKP42681 527 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 RBM5P52756 815 aaKnown RBP eCLIP11.22□□□□□ -0.61
LINC00494-201ENST00000416742 CBX1P83916 185 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 KRT31Q15323 416 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 KMT5BQ4FZB7 885 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 TMC4Q7Z404 712 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 REXO1Q8N1G1 1221 aaKnown RBP11.22□□□□□ -0.61
LINC00494-201ENST00000416742 SERPINB13Q9UIV8 391 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 RWDD2AQ9UIY3 292 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 CACNB3P54284 484 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 GNG11P61952 73 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 ELF2Q15723 593 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 CCDC96Q2M329 555 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 EEF2KMTQ96G04 330 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 ERO1AQ96HE7 468 aa11.22□□□□□ -0.61
LINC00494-201ENST00000416742 KLRG2A4D1S0 409 aaPredicted RBP11.21□□□□□ -0.61
LINC00494-201ENST00000416742 SOWAHDA6NJG2 315 aa11.21□□□□□ -0.61
LINC00494-201ENST00000416742 APBA3O96018 575 aa11.21□□□□□ -0.61
LINC00494-201ENST00000416742 MMP10P09238 476 aa11.21□□□□□ -0.61
LINC00494-201ENST00000416742 NPR1P16066 1061 aa11.21□□□□□ -0.61
LINC00494-201ENST00000416742 PLCG1P19174 1290 aa11.21□□□□□ -0.61
LINC00494-201ENST00000416742 CASP14P31944 242 aa11.21□□□□□ -0.61
LINC00494-201ENST00000416742 TCP10Q12799 353 aa11.21□□□□□ -0.61
LINC00494-201ENST00000416742 KCNQ5Q9NR82 932 aa11.21□□□□□ -0.61
LINC00494-201ENST00000416742 KCNJ18B7U540 433 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 TPM1P09493 284 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 SLC16A2P36021 539 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 COPB1P53618 953 aaKnown RBP11.21□□□□□ -0.62
LINC00494-201ENST00000416742 KCNJ12Q14500 433 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 TTBK2Q6IQ55 1244 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 TRIM65Q6PJ69 517 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 KIAA0825Q8IV33 1275 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 CCSER1Q9C0I3 900 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 PARP3Q9Y6F1 533 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 UBR3Q6ZT12 1888 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 FAM196BA6NMK8 535 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 ALDH1B1P30837 517 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 SYCP1Q15431 976 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 CDC42EP5Q6NZY7 148 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 FCHSD1Q86WN1 690 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 TEKT1Q969V4 418 aa11.21□□□□□ -0.62
LINC00494-201ENST00000416742 MYH1P12882 1939 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 LAD1O00515 517 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 TNNI2P48788 182 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 NFIAQ12857 509 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 STIM1Q13586 685 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 POTEDQ86YR6 584 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 ZSCAN29Q8IWY8 852 aaPredicted RBP11.2□□□□□ -0.62
LINC00494-201ENST00000416742 LRRN4CLQ8ND94 238 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 TRIM47Q96LD4 638 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 UIMC1Q96RL1 719 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 RIOX1Q9H6W3 641 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 TUBB4AP04350 444 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 HLA-DOAP06340 250 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 ASIC1P78348 528 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 SPAG1Q07617 926 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 ERCC6LQ2NKX8 1250 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 KCTD1Q719H9 257 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 LRRC15Q8TF66 581 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 NUP88Q99567 741 aaPredicted RBP11.2□□□□□ -0.62
LINC00494-201ENST00000416742 SRRTQ9BXP5 876 aaKnown RBP11.2□□□□□ -0.62
LINC00494-201ENST00000416742 CGNQ9P2M7 1197 aaKnown RBP11.2□□□□□ -0.62
LINC00494-201ENST00000416742 PCDHAC2Q9Y5I4 1007 aa11.2□□□□□ -0.62
LINC00494-201ENST00000416742 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.2□□□□□ -0.62
LINC00494-201ENST00000416742 MARCH6O60337 910 aa11.19□□□□□ -0.62
LINC00494-201ENST00000416742 TTLL1O95922 423 aa11.19□□□□□ -0.62
LINC00494-201ENST00000416742 PRPHP41219 470 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms