RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 CHST13Q8NET6 341 aa11.98□□□□□ -0.49
MDC1-202ENST00000416571 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.98□□□□□ -0.49
MDC1-202ENST00000416571 PBX4Q9BYU1 374 aa11.98□□□□□ -0.49
MDC1-202ENST00000416571 MTIF3Q9H2K0 278 aaKnown RBP11.98□□□□□ -0.49
MDC1-202ENST00000416571 RAVER2Q9HCJ3 691 aaKnown RBP11.98□□□□□ -0.49
MDC1-202ENST00000416571 CLIP2Q9UDT6 1046 aa11.98□□□□□ -0.49
MDC1-202ENST00000416571 MSRAQ9UJ68 235 aa11.98□□□□□ -0.49
MDC1-202ENST00000416571 COG6Q9Y2V7 657 aa11.98□□□□□ -0.49
MDC1-202ENST00000416571 TNFRSF10AO00220 468 aa11.97□□□□□ -0.49
MDC1-202ENST00000416571 PBX2P40425 430 aa11.97□□□□□ -0.49
MDC1-202ENST00000416571 TDO2P48775 406 aa11.97□□□□□ -0.49
MDC1-202ENST00000416571 CDK7P50613 346 aa11.97□□□□□ -0.49
MDC1-202ENST00000416571 GJA9P57773 515 aa11.97□□□□□ -0.49
MDC1-202ENST00000416571 TMEM240Q5SV17 173 aa11.97□□□□□ -0.49
MDC1-202ENST00000416571 SIRT2Q8IXJ6 389 aa11.97□□□□□ -0.49
MDC1-202ENST00000416571 ZNF444Q8N0Y2 327 aaPredicted RBP11.97□□□□□ -0.49
MDC1-202ENST00000416571 IL27Q8NEV9 243 aa11.97□□□□□ -0.49
MDC1-202ENST00000416571 LRRCC1Q9C099 1032 aa11.97□□□□□ -0.49
MDC1-202ENST00000416571 UPF3AQ9H1J1 476 aaKnown RBP11.97□□□□□ -0.49
MDC1-202ENST00000416571 PRDM12Q9H4Q4 367 aa11.97□□□□□ -0.49
MDC1-202ENST00000416571 FEM1BQ9UK73 627 aa11.97□□□□□ -0.49
MDC1-202ENST00000416571 GRXCR1A8MXD5 290 aa11.96□□□□□ -0.49
MDC1-202ENST00000416571 APPP05067 770 aa11.96□□□□□ -0.49
MDC1-202ENST00000416571 ACRP10323 421 aa11.96□□□□□ -0.49
MDC1-202ENST00000416571 OAZ1P54368 228 aa11.96□□□□□ -0.49
MDC1-202ENST00000416571 IRX5P78411 483 aaPredicted RBP11.96□□□□□ -0.49
MDC1-202ENST00000416571 IKQ13123 557 aaPredicted RBP11.96□□□□□ -0.49
MDC1-202ENST00000416571 RAB30Q15771 203 aa11.96□□□□□ -0.49
MDC1-202ENST00000416571 GIMAP6Q6P9H5 292 aa11.96□□□□□ -0.49
MDC1-202ENST00000416571 ZNF365Q70YC5 407 aa11.96□□□□□ -0.49
MDC1-202ENST00000416571 C16orf59Q7L2K0 433 aa11.96□□□□□ -0.49
MDC1-202ENST00000416571 FAM126BQ8IXS8 530 aa11.96□□□□□ -0.49
MDC1-202ENST00000416571 CCDC144CPQ8IYA2 1237 aa11.96□□□□□ -0.49
MDC1-202ENST00000416571 ATXN2LQ8WWM7 1075 aaKnown RBP11.96□□□□□ -0.49
MDC1-202ENST00000416571 STRBPQ96SI9 672 aaKnown RBP11.96□□□□□ -0.49
MDC1-202ENST00000416571 SLC38A10Q9HBR0 1119 aa11.96□□□□□ -0.49
MDC1-202ENST00000416571 HOMER2Q9NSB8 354 aa11.96□□□□□ -0.49
MDC1-202ENST00000416571 ZBTB40Q9NUA8 1239 aa11.96□□□□□ -0.49
MDC1-202ENST00000416571 THEGQ9P2T0 379 aa11.96□□□□□ -0.49
MDC1-202ENST00000416571 GSG1L2A8MUP6 293 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 ADCY6O43306 1168 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 PRDM1O75626 825 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 TTLL1O95922 423 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 FDX1P10109 184 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 BMP3P12645 472 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 GNAT2P19087 354 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 IGFBP4P22692 258 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 BEX3Q00994 111 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 TNFAIP2Q03169 654 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 AKNAD1Q5T1N1 836 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 RASIP1Q5U651 963 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.95□□□□□ -0.5
MDC1-202ENST00000416571 LRRC47Q8N1G4 583 aaKnown RBP11.95□□□□□ -0.5
MDC1-202ENST00000416571 APPBP2Q92624 585 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 CEP95Q96GE4 821 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 GPATCH3Q96I76 525 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 ACAD9Q9H845 621 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 SLC28A3Q9HAS3 691 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 IL23AQ9NPF7 189 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 ECHDC1Q9NTX5 307 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 SYNPO2Q9UMS6 1093 aa11.95□□□□□ -0.5
MDC1-202ENST00000416571 GBF1Q92538 1859 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 ASB14A6NK59 587 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 ZEB2O60315 1214 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 CABYRO75952 493 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 FGBP02675 491 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 TSPY3P0CV98 308 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 TSPY8P0CW00 308 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 CYP2C18P33260 490 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 STAT2P52630 851 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 CNTN2Q02246 1040 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 CCDC85BQ15834 202 aaPredicted RBP11.94□□□□□ -0.5
MDC1-202ENST00000416571 LRRFIP1Q32MZ4 808 aaKnown RBP11.94□□□□□ -0.5
MDC1-202ENST00000416571 SLFN13Q68D06 897 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 CXCL17Q6UXB2 119 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 TLK2Q86UE8 772 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 KBTBD3Q8NAB2 608 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 GMCL1P1Q8NEA9 526 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 MKL1Q969V6 931 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 FGD4Q96M96 766 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 AP5M1Q9H0R1 490 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 TSPYL2Q9H2G4 693 aaPredicted RBP11.94□□□□□ -0.5
MDC1-202ENST00000416571 HIPK3Q9H422 1215 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 MTMR4Q9NYA4 1195 aa11.94□□□□□ -0.5
MDC1-202ENST00000416571 IGKV6D-41A0A0C4DH26 115 aa11.93□□□□□ -0.5
MDC1-202ENST00000416571 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.93□□□□□ -0.5
MDC1-202ENST00000416571 TMEM232C9JQI7 657 aa11.93□□□□□ -0.5
MDC1-202ENST00000416571 GPAA1O43292 621 aa11.93□□□□□ -0.5
MDC1-202ENST00000416571 SMARCA5O60264 1052 aaPredicted RBP11.93□□□□□ -0.5
MDC1-202ENST00000416571 ZFYP08048 801 aaPredicted RBP11.93□□□□□ -0.5
MDC1-202ENST00000416571 SLC3A2P08195 630 aaKnown RBP11.93□□□□□ -0.5
MDC1-202ENST00000416571 MRPS5P82675 430 aaKnown RBP11.93□□□□□ -0.5
MDC1-202ENST00000416571 PDE4BQ07343 736 aa11.93□□□□□ -0.5
MDC1-202ENST00000416571 ITGA7Q13683 1181 aa11.93□□□□□ -0.5
MDC1-202ENST00000416571 CHURC1Q8WUH1 139 aa11.93□□□□□ -0.5
MDC1-202ENST00000416571 HERVK_113Q902F9 699 aa11.93□□□□□ -0.5
MDC1-202ENST00000416571 OSBP2Q969R2 916 aa11.93□□□□□ -0.5
MDC1-202ENST00000416571 ASB2Q96Q27 587 aa11.93□□□□□ -0.5
MDC1-202ENST00000416571 SEZ6LQ9BYH1 1024 aa11.93□□□□□ -0.5
MDC1-202ENST00000416571 NACAP1Q9BZK3 213 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms