RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 NID2Q14112 1375 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 EEF2P13639 858 aaKnown RBP10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 CTGFP29279 349 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 RGS2P41220 211 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 TROAPQ12815 778 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 NTRK3Q16288 839 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 SAMD1Q6SPF0 538 aaPredicted RBP10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 LBX2Q6XYB7 198 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 PLEKHH3Q7Z736 793 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 CLEC10AQ8IUN9 316 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 NUP133Q8WUM0 1156 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 TCP11L1Q9NUJ3 509 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 SLC5A4Q9NY91 659 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 ISY1Q9ULR0 285 aaKnown RBP10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 MTMR6Q9Y217 621 aa10.7□□□□□ -0.7
CHRNA1-206ENST00000416004 STX6O43752 255 aa10.69□□□□□ -0.7
CHRNA1-206ENST00000416004 HMGCRP04035 888 aa10.69□□□□□ -0.7
CHRNA1-206ENST00000416004 NT5C2P49902 561 aa10.69□□□□□ -0.7
CHRNA1-206ENST00000416004 CAP1Q01518 475 aa10.69□□□□□ -0.7
CHRNA1-206ENST00000416004 PLS1Q14651 629 aa10.69□□□□□ -0.7
CHRNA1-206ENST00000416004 RTN1Q16799 776 aa10.69□□□□□ -0.7
CHRNA1-206ENST00000416004 SYNE3Q6ZMZ3 975 aa10.69□□□□□ -0.7
CHRNA1-206ENST00000416004 SPICE1Q8N0Z3 855 aa10.69□□□□□ -0.7
CHRNA1-206ENST00000416004 CMTR1Q8N1G2 835 aaKnown RBP10.69□□□□□ -0.7
CHRNA1-206ENST00000416004 ANKS1AQ92625 1134 aa10.69□□□□□ -0.7
CHRNA1-206ENST00000416004 CEP95Q96GE4 821 aa10.69□□□□□ -0.7
CHRNA1-206ENST00000416004 NYAP2Q9P242 653 aa10.69□□□□□ -0.7
CHRNA1-206ENST00000416004 RBPJLQ9UBG7 517 aa10.69□□□□□ -0.7
CHRNA1-206ENST00000416004 IGKV6D-41A0A0C4DH26 115 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 CPLX1O14810 134 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 DHX16O60231 1041 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 TTLL1O95922 423 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 CCL5P13501 91 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 COPB2P35606 906 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 FOSBP53539 338 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 LARP1BQ659C4 914 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 RASGRP2Q7LDG7 609 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 GPR142Q7Z601 462 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 CATIPQ7Z7H3 387 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 DGKHQ86XP1 1220 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 FANCBQ8NB91 859 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 PHKBQ93100 1093 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 TMEM47Q9BQJ4 181 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 CLIP2Q9UDT6 1046 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 SYNPO2Q9UMS6 1093 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 DOCK3Q8IZD9 2030 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 PLIN4Q96Q06 1357 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 A0A1W2PRG0 241 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 POTEFA5A3E0 1075 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 VPS37CA5D8V6 355 aaPredicted RBP10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 SPDYE16A6NNV3 312 aaPredicted RBP10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 INHAP05111 366 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 ZSCAN22P10073 491 aaPredicted RBP10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 ELNP15502 786 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 CYP2B6P20813 491 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 NOVP48745 357 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 RCAN1P53805 252 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 HMGN5P82970 282 aaKnown RBP10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 HSP90AA2PQ14568 343 aaPredicted RBP10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 CHMP4CQ96CF2 233 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 ORC3Q9UBD5 711 aaPredicted RBP10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 STX8Q9UNK0 236 aa10.68□□□□□ -0.7
CHRNA1-206ENST00000416004 STRNO43815 780 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 DDAH1O94760 285 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 PLEKHA8P1O95397 391 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 SLC25A27O95847 323 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 TFRCP02786 760 aaKnown RBP10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 GJB1P08034 283 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 XRCC5P13010 732 aaKnown RBP10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 EN2P19622 333 aaPredicted RBP10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 DSG3P32926 999 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 FUT2Q10981 343 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 FAM184AQ8NB25 1140 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 PNMA1Q8ND90 353 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 AIFM3Q96NN9 605 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 APBA2Q99767 749 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 KAT14Q9H8E8 782 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 TXNRD2Q9NNW7 524 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 HMX1Q9NP08 348 aaPredicted RBP10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 GJB4Q9NTQ9 266 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 MTMR4Q9NYA4 1195 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 PLXNB2O15031 1838 aa10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 GREB1LQ9C091 1923 aaPredicted RBP10.67□□□□□ -0.7
CHRNA1-206ENST00000416004 SLC15A5A6NIM6 579 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 BAG4O95429 457 aaKnown RBP10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 IFNAR1P17181 557 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 IKQ13123 557 aaPredicted RBP10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 Q3C1V9 767 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 FOXD4L6Q3SYB3 417 aaPredicted RBP10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 MFSD14CQ5VZR4 134 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 FOXD4L3Q6VB84 417 aaPredicted RBP10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 DPP9Q86TI2 863 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 CCDC82Q8N4S0 544 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 SHCBP1Q8NEM2 672 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 SPATC1LQ9H0A9 340 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 MROH8Q9H579 483 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 RPTORQ8N122 1335 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 ZBED4O75132 1171 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 F13A1P00488 732 aa10.66□□□□□ -0.7
CHRNA1-206ENST00000416004 PDCP20941 246 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms