RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 NUCKS1Q9H1E3 243 aaKnown RBP12.89□□□□□ -0.35
SCN4B-202ENST00000415030 NHEJ1Q9H9Q4 299 aaPredicted RBP12.89□□□□□ -0.35
SCN4B-202ENST00000415030 PIH1D3Q9NQM4 214 aaKnown RBP12.89□□□□□ -0.35
SCN4B-202ENST00000415030 DDAH1O94760 285 aa12.89□□□□□ -0.35
SCN4B-202ENST00000415030 CTSWP56202 376 aa12.89□□□□□ -0.35
SCN4B-202ENST00000415030 BRINP3Q76B58 766 aa12.89□□□□□ -0.35
SCN4B-202ENST00000415030 HELBQ8NG08 1087 aaPredicted RBP12.89□□□□□ -0.35
SCN4B-202ENST00000415030 ZSCAN10Q96SZ4 725 aaPredicted RBP12.89□□□□□ -0.35
SCN4B-202ENST00000415030 ATP1A1P05023 1023 aaKnown RBP12.88□□□□□ -0.35
SCN4B-202ENST00000415030 PHKA1P46020 1223 aa12.88□□□□□ -0.35
SCN4B-202ENST00000415030 E2F4Q16254 413 aa12.88□□□□□ -0.35
SCN4B-202ENST00000415030 GLE1Q53GS7 698 aaKnown RBP12.88□□□□□ -0.35
SCN4B-202ENST00000415030 ARL6IP4Q66PJ3 421 aaKnown RBP12.88□□□□□ -0.35
SCN4B-202ENST00000415030 MMS19Q96T76 1030 aa12.88□□□□□ -0.35
SCN4B-202ENST00000415030 CRNKL1Q9BZJ0 848 aaKnown RBP12.88□□□□□ -0.35
SCN4B-202ENST00000415030 TTC26A0AVF1 554 aa12.88□□□□□ -0.35
SCN4B-202ENST00000415030 TYW1BQ6NUM6 668 aa12.88□□□□□ -0.35
SCN4B-202ENST00000415030 C2CD5Q86YS7 1000 aa12.88□□□□□ -0.35
SCN4B-202ENST00000415030 CAPN11Q9UMQ6 739 aa12.88□□□□□ -0.35
SCN4B-202ENST00000415030 SCARF1Q14162 830 aa12.88□□□□□ -0.35
SCN4B-202ENST00000415030 CCDC152Q4G0S7 254 aa12.88□□□□□ -0.35
SCN4B-202ENST00000415030 CUEDC2Q9H467 287 aa12.88□□□□□ -0.35
SCN4B-202ENST00000415030 NALCNQ8IZF0 1738 aa12.88□□□□□ -0.35
SCN4B-202ENST00000415030 CEP57Q86XR8 500 aa12.88□□□□□ -0.35
SCN4B-202ENST00000415030 ZNF512BQ96KM6 892 aaPredicted RBP12.88□□□□□ -0.35
SCN4B-202ENST00000415030 STIM2Q9P246 746 aa12.88□□□□□ -0.35
SCN4B-202ENST00000415030 B4DLN1 442 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 GCOM1H8Y6P7 765 aaPredicted RBP12.87□□□□□ -0.35
SCN4B-202ENST00000415030 SRGAP2O75044 1071 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 KRT18P05783 430 aaKnown RBP12.87□□□□□ -0.35
SCN4B-202ENST00000415030 MYZAPP0CAP1 466 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 CASP7P55210 303 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 NTRK3Q16288 839 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 SLC9C1Q4G0N8 1177 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 ANKS4BQ8N8V4 417 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 OXER1Q8TDS5 423 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 ZNF287Q9HBT7 754 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 HDAC6Q9UBN7 1215 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 SEC63Q9UGP8 760 aaKnown RBP12.87□□□□□ -0.35
SCN4B-202ENST00000415030 SETD1BQ9UPS6 1966 aaKnown RBP12.87□□□□□ -0.35
SCN4B-202ENST00000415030 EIF3HO15372 352 aaKnown RBP eCLIP12.87□□□□□ -0.35
SCN4B-202ENST00000415030 COBLO75128 1261 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 PRDM1O75626 825 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 ERVK-24P63145 666 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.87□□□□□ -0.35
SCN4B-202ENST00000415030 A0A1B0GUA9 196 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 PPP1R3GB7ZBB8 358 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 SCG2P13521 617 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 BMP6P22004 513 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 CASP1P29466 404 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 ATP1A2P50993 1020 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 IRAK1P51617 712 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 CUL4BQ13620 913 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 TACO1Q9BSH4 297 aaKnown RBP12.87□□□□□ -0.35
SCN4B-202ENST00000415030 SAMM50Q9Y512 469 aa12.87□□□□□ -0.35
SCN4B-202ENST00000415030 GOLGA6L10A0A0M3HER8 536 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 GUCY1A2P33402 732 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 GRIN1Q05586 938 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 MSL1Q68DK7 614 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 CPLX4Q7Z7G2 160 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 SUGP1Q8IWZ8 645 aaKnown RBP12.86□□□□□ -0.35
SCN4B-202ENST00000415030 CHP1Q99653 195 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 NRXN3Q9Y4C0 1643 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 hCG_1642624A0A1W2PR95 340 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 TMCO5BA8MYB1 307 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 E7EVH7 732 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 GBP2P32456 591 aaPredicted RBP12.86□□□□□ -0.35
SCN4B-202ENST00000415030 NOP2P46087 812 aaKnown RBP12.86□□□□□ -0.35
SCN4B-202ENST00000415030 NNTQ13423 1086 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 MTMR3Q13615 1198 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 TTLL12Q14166 644 aaPredicted RBP12.86□□□□□ -0.35
SCN4B-202ENST00000415030 CEP85LQ5SZL2 805 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 PAPD7Q5XG87 772 aaKnown RBP12.86□□□□□ -0.35
SCN4B-202ENST00000415030 LMBR1Q8WVP7 490 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 CNOT6LQ96LI5 555 aaKnown RBP12.86□□□□□ -0.35
SCN4B-202ENST00000415030 MKNK2Q9HBH9 465 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 SWAP70Q9UH65 585 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 PXDNQ92626 1479 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 CDC25AP30304 524 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 TOB1P50616 345 aaPredicted RBP12.86□□□□□ -0.35
SCN4B-202ENST00000415030 USP49Q70CQ1 688 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 CCDC43Q96MW1 224 aaKnown RBP12.86□□□□□ -0.35
SCN4B-202ENST00000415030 PSMB7Q99436 277 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 CDHR2Q9BYE9 1310 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 HPDP32754 393 aaPredicted RBP12.86□□□□□ -0.35
SCN4B-202ENST00000415030 AXIN2Q9Y2T1 843 aa12.86□□□□□ -0.35
SCN4B-202ENST00000415030 CCNE1P24864 410 aa12.85□□□□□ -0.35
SCN4B-202ENST00000415030 ATP2C1P98194 919 aaPredicted RBP12.85□□□□□ -0.35
SCN4B-202ENST00000415030 GIGYF2Q6Y7W6 1299 aaKnown RBP12.85□□□□□ -0.35
SCN4B-202ENST00000415030 SV2BQ7L1I2 683 aa12.85□□□□□ -0.35
SCN4B-202ENST00000415030 BLIDQ8IZY5 108 aa12.85□□□□□ -0.35
SCN4B-202ENST00000415030 P2RX5Q93086 422 aa12.85□□□□□ -0.35
SCN4B-202ENST00000415030 PLIN2Q99541 437 aa12.85□□□□□ -0.35
SCN4B-202ENST00000415030 ISCA1Q9BUE6 129 aa12.85□□□□□ -0.35
SCN4B-202ENST00000415030 GREM2Q9H772 168 aa12.85□□□□□ -0.35
SCN4B-202ENST00000415030 ACTR5Q9H9F9 607 aaPredicted RBP12.85□□□□□ -0.35
SCN4B-202ENST00000415030 LRWD1Q9UFC0 647 aa12.85□□□□□ -0.35
SCN4B-202ENST00000415030 TRIM28Q13263 835 aaKnown RBP12.85□□□□□ -0.35
SCN4B-202ENST00000415030 PACS2Q86VP3 889 aa12.85□□□□□ -0.35
SCN4B-202ENST00000415030 DZIP1Q86YF9 867 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms