RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 IRF5Q13568 498 aa19.18■□□□□ 0.66
LINC00398-201ENST00000414407 PPP2R5BQ15173 497 aa19.18■□□□□ 0.66
LINC00398-201ENST00000414407 NCAPG2Q86XI2 1143 aa19.18■□□□□ 0.66
LINC00398-201ENST00000414407 FANCBQ8NB91 859 aa19.18■□□□□ 0.66
LINC00398-201ENST00000414407 CHST13Q8NET6 341 aa19.18■□□□□ 0.66
LINC00398-201ENST00000414407 BRF1Q92994 677 aa19.18■□□□□ 0.66
LINC00398-201ENST00000414407 NUDT12Q9BQG2 462 aa19.18■□□□□ 0.66
LINC00398-201ENST00000414407 MYL10Q9BUA6 226 aa19.18■□□□□ 0.66
LINC00398-201ENST00000414407 C22orf23Q9BZE7 217 aa19.18■□□□□ 0.66
LINC00398-201ENST00000414407 UPF3BQ9BZI7 483 aaKnown RBP19.18■□□□□ 0.66
LINC00398-201ENST00000414407 RIOX1Q9H6W3 641 aa19.18■□□□□ 0.66
LINC00398-201ENST00000414407 PDRG1Q9NUG6 133 aa19.18■□□□□ 0.66
LINC00398-201ENST00000414407 FBXO40Q9UH90 709 aa19.18■□□□□ 0.66
LINC00398-201ENST00000414407 BRPF3Q9ULD4 1205 aa19.18■□□□□ 0.66
LINC00398-201ENST00000414407 COL11A1P12107 1806 aaPredicted RBP19.18■□□□□ 0.66
LINC00398-201ENST00000414407 KLF18A0A0U1RQI7 1052 aa19.17■□□□□ 0.66
LINC00398-201ENST00000414407 ZBTB43O43298 467 aa19.17■□□□□ 0.66
LINC00398-201ENST00000414407 ECM2O94769 699 aaPredicted RBP19.17■□□□□ 0.66
LINC00398-201ENST00000414407 PTPREP23469 700 aa19.17■□□□□ 0.66
LINC00398-201ENST00000414407 PRKCZQ05513 592 aa19.17■□□□□ 0.66
LINC00398-201ENST00000414407 GRB14Q14449 540 aa19.17■□□□□ 0.66
LINC00398-201ENST00000414407 MORN1Q5T089 497 aa19.17■□□□□ 0.66
LINC00398-201ENST00000414407 MTMR8Q96EF0 704 aa19.17■□□□□ 0.66
LINC00398-201ENST00000414407 MCOLN1Q9GZU1 580 aa19.17■□□□□ 0.66
LINC00398-201ENST00000414407 JMJD4Q9H9V9 463 aa19.17■□□□□ 0.66
LINC00398-201ENST00000414407 RBM28Q9NW13 759 aaKnown RBP19.17■□□□□ 0.66
LINC00398-201ENST00000414407 ZSWIM8A7E2V4 1837 aa19.16■□□□□ 0.66
LINC00398-201ENST00000414407 FCER1AP12319 257 aa19.16■□□□□ 0.66
LINC00398-201ENST00000414407 XRCC5P13010 732 aaKnown RBP19.16■□□□□ 0.66
LINC00398-201ENST00000414407 FLT3LGP49771 235 aa19.16■□□□□ 0.66
LINC00398-201ENST00000414407 TOB2Q14106 344 aaPredicted RBP19.16■□□□□ 0.66
LINC00398-201ENST00000414407 CDC37Q16543 378 aaPredicted RBP19.16■□□□□ 0.66
LINC00398-201ENST00000414407 WDR78Q5VTH9 848 aa19.16■□□□□ 0.66
LINC00398-201ENST00000414407 CCDC174Q6PII3 467 aa19.16■□□□□ 0.66
LINC00398-201ENST00000414407 MICU3Q86XE3 530 aa19.16■□□□□ 0.66
LINC00398-201ENST00000414407 USP6NLQ92738 828 aa19.16■□□□□ 0.66
LINC00398-201ENST00000414407 AGBL1Q96MI9 1066 aa19.16■□□□□ 0.66
LINC00398-201ENST00000414407 SPZ1Q9BXG8 430 aa19.16■□□□□ 0.66
LINC00398-201ENST00000414407 BACH2Q9BYV9 841 aa19.16■□□□□ 0.66
LINC00398-201ENST00000414407 CPVLQ9H3G5 476 aa19.16■□□□□ 0.66
LINC00398-201ENST00000414407 GABRQQ9UN88 632 aa19.16■□□□□ 0.66
LINC00398-201ENST00000414407 RIPK3Q9Y572 518 aa19.16■□□□□ 0.66
LINC00398-201ENST00000414407 DHX16O60231 1041 aaKnown RBP19.15■□□□□ 0.66
LINC00398-201ENST00000414407 SNAP25P60880 206 aa19.15■□□□□ 0.66
LINC00398-201ENST00000414407 APOBRQ0VD83 1088 aa19.15■□□□□ 0.66
LINC00398-201ENST00000414407 RAET1EQ8TD07 263 aa19.15■□□□□ 0.66
LINC00398-201ENST00000414407 PXYLP1Q8TE99 480 aa19.15■□□□□ 0.66
LINC00398-201ENST00000414407 CCPG1Q9ULG6 757 aa19.15■□□□□ 0.66
LINC00398-201ENST00000414407 NID2Q14112 1375 aa19.15■□□□□ 0.66
LINC00398-201ENST00000414407 CCDC196A0A1B0GTZ2 297 aa19.14■□□□□ 0.65
LINC00398-201ENST00000414407 ZBTB5O15062 677 aa19.14■□□□□ 0.65
LINC00398-201ENST00000414407 HOXC6P09630 235 aa19.14■□□□□ 0.65
LINC00398-201ENST00000414407 RGS2P41220 211 aa19.14■□□□□ 0.65
LINC00398-201ENST00000414407 TRAF1Q13077 416 aa19.14■□□□□ 0.65
LINC00398-201ENST00000414407 MAP2K5Q13163 448 aa19.14■□□□□ 0.65
LINC00398-201ENST00000414407 KCTD2Q14681 263 aa19.14■□□□□ 0.65
LINC00398-201ENST00000414407 ANKRD1Q15327 319 aa19.14■□□□□ 0.65
LINC00398-201ENST00000414407 RTN1Q16799 776 aa19.14■□□□□ 0.65
LINC00398-201ENST00000414407 IL27Q8NEV9 243 aa19.14■□□□□ 0.65
LINC00398-201ENST00000414407 MAF1Q9H063 256 aa19.14■□□□□ 0.65
LINC00398-201ENST00000414407 ACAD9Q9H845 621 aa19.14■□□□□ 0.65
LINC00398-201ENST00000414407 VAT1LQ9HCJ6 419 aa19.14■□□□□ 0.65
LINC00398-201ENST00000414407 PTCH2Q9Y6C5 1203 aa19.14■□□□□ 0.65
LINC00398-201ENST00000414407 GOLGA8AA7E2F4 631 aa19.13■□□□□ 0.65
LINC00398-201ENST00000414407 GOLGA8BA8MQT2 603 aa19.13■□□□□ 0.65
LINC00398-201ENST00000414407 CYTH3O43739 400 aa19.13■□□□□ 0.65
LINC00398-201ENST00000414407 ALAS1P13196 640 aa19.13■□□□□ 0.65
LINC00398-201ENST00000414407 RXRAP19793 462 aa19.13■□□□□ 0.65
LINC00398-201ENST00000414407 SLC35G1Q2M3R5 365 aa19.13■□□□□ 0.65
LINC00398-201ENST00000414407 QRICH1Q2TAL8 776 aa19.13■□□□□ 0.65
LINC00398-201ENST00000414407 TMTC3Q6ZXV5 915 aa19.13■□□□□ 0.65
LINC00398-201ENST00000414407 NBPF11Q86T75 865 aa19.13■□□□□ 0.65
LINC00398-201ENST00000414407 TRMT44Q8IYL2 757 aaKnown RBP19.13■□□□□ 0.65
LINC00398-201ENST00000414407 ZNF274Q96GC6 653 aaPredicted RBP19.13■□□□□ 0.65
LINC00398-201ENST00000414407 TRERF1Q96PN7 1200 aa19.13■□□□□ 0.65
LINC00398-201ENST00000414407 MMP19Q99542 508 aa19.13■□□□□ 0.65
LINC00398-201ENST00000414407 RNF146Q9NTX7 359 aa19.13■□□□□ 0.65
LINC00398-201ENST00000414407 SLC5A4Q9NY91 659 aa19.13■□□□□ 0.65
LINC00398-201ENST00000414407 ZNF236Q9UL36 1845 aa19.13■□□□□ 0.65
LINC00398-201ENST00000414407 PNMA6FA0A0J9YX94 578 aa19.12■□□□□ 0.65
LINC00398-201ENST00000414407 ADORA2AP29274 412 aa19.12■□□□□ 0.65
LINC00398-201ENST00000414407 PDIA3P30101 505 aaKnown RBP19.12■□□□□ 0.65
LINC00398-201ENST00000414407 SLC4A3P48751 1232 aa19.12■□□□□ 0.65
LINC00398-201ENST00000414407 METAP2P50579 478 aaKnown RBP eCLIP19.12■□□□□ 0.65
LINC00398-201ENST00000414407 FBXO11Q86XK2 927 aa19.12■□□□□ 0.65
LINC00398-201ENST00000414407 CCDC144CPQ8IYA2 1237 aa19.12■□□□□ 0.65
LINC00398-201ENST00000414407 SRBD1Q8N5C6 995 aaKnown RBP19.12■□□□□ 0.65
LINC00398-201ENST00000414407 SLAIN1Q8ND83 568 aa19.12■□□□□ 0.65
LINC00398-201ENST00000414407 KIF2CQ99661 725 aa19.12■□□□□ 0.65
LINC00398-201ENST00000414407 APBA2Q99767 749 aa19.12■□□□□ 0.65
LINC00398-201ENST00000414407 AMNQ9BXJ7 453 aa19.12■□□□□ 0.65
LINC00398-201ENST00000414407 HPS5Q9UPZ3 1129 aa19.12■□□□□ 0.65
LINC00398-201ENST00000414407 DOCK3Q8IZD9 2030 aa19.12■□□□□ 0.65
LINC00398-201ENST00000414407 ABCB11O95342 1321 aa19.11■□□□□ 0.65
LINC00398-201ENST00000414407 ADCY3O60266 1144 aa19.11■□□□□ 0.65
LINC00398-201ENST00000414407 PLEKHA8P1O95397 391 aa19.11■□□□□ 0.65
LINC00398-201ENST00000414407 NEK4P51957 841 aa19.11■□□□□ 0.65
LINC00398-201ENST00000414407 DPP9Q86TI2 863 aa19.11■□□□□ 0.65
LINC00398-201ENST00000414407 RAB11FIP4Q86YS3 637 aa19.11■□□□□ 0.65
LINC00398-201ENST00000414407 TNS4Q8IZW8 715 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms