RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ERICH4A6NGS2 130 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 FAM170BA6NMN3 283 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 PRSS47A8MTI9 375 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 FAM25EA8MYX2 175 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 TSPAN6O43657 245 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 BBOX1O75936 387 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 TPM3P06753 285 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 DRD2P14416 443 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 STIP1P31948 543 aaKnown RBP4.28□□□□□ -1.72
SF3B1-203ENST00000414174 MAGEA8P43361 318 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 ARL4DP49703 201 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 GEMIN4P57678 1058 aaKnown RBP4.28□□□□□ -1.72
SF3B1-203ENST00000414174 GPSM2P81274 684 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 PCDH1Q08174 1060 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 TRIM29Q14134 588 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 NFE2Q16621 373 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-203ENST00000414174 ANKRD45Q5TZF3 282 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 TSHZ3Q63HK5 1081 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 CDPF1Q6NVV7 123 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 CTR9Q6PD62 1173 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 DAAM2Q86T65 1068 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 WDR75Q8IWA0 830 aaKnown RBP4.28□□□□□ -1.72
SF3B1-203ENST00000414174 NKAIN3Q8N8D7 197 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 FBLIM1Q8WUP2 373 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 ZFPM2Q8WW38 1151 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 TBC1D20Q96BZ9 403 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 MISP3Q96FF7 219 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 TMEM87BQ96K49 555 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 ZNF396Q96N95 335 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-203ENST00000414174 LZTS2Q9BRK4 669 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 FAM167BQ9BTA0 163 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 YIPF2Q9BWQ6 316 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 TEX13AQ9BXU3 409 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-203ENST00000414174 USP26Q9BXU7 913 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 GTPBP4Q9BZE4 634 aaKnown RBP4.28□□□□□ -1.72
SF3B1-203ENST00000414174 TSPYL1Q9H0U9 437 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 NPHS2Q9NP85 383 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 RIC8AQ9NPQ8 531 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 METTL5Q9NRN9 209 aaKnown RBP4.28□□□□□ -1.72
SF3B1-203ENST00000414174 PARP2Q9UGN5 583 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 RABL2BQ9UNT1 228 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 PAXBP1Q9Y5B6 917 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 UNC13AQ9UPW8 1703 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 IQCA1LA6NCM1 817 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 C19orf81C9J6K1 198 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 FIBPO43427 364 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 TSPAN15O95858 294 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 SETSIPP0DME0 302 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 FUT4P22083 530 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 HOXD10P28358 340 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 ZNF76P36508 570 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 FANCCQ00597 558 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 EXOSC10Q01780 885 aaKnown RBP4.27□□□□□ -1.73
SF3B1-203ENST00000414174 GSTM4Q03013 218 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 ARID5AQ03989 594 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 MORC3Q14149 939 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 TOMM20Q15388 145 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 PARP10Q53GL7 1025 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 DNAJC21Q5F1R6 531 aaKnown RBP4.27□□□□□ -1.73
SF3B1-203ENST00000414174 CT47A1Q5JQC4 288 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-203ENST00000414174 WDR45BQ5MNZ6 344 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 EXOSC6Q5RKV6 272 aaKnown RBP4.27□□□□□ -1.73
SF3B1-203ENST00000414174 KIAA0319Q5VV43 1072 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 ARMC3Q5W041 872 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 PPP4R4Q6NUP7 873 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 CPLX2Q6PUV4 134 aaKnown RBP4.27□□□□□ -1.73
SF3B1-203ENST00000414174 WAPLQ7Z5K2 1190 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 AMIGO3Q86WK7 504 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 CCDC191Q8NCU4 936 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 C2CD4AQ8NCU7 369 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-203ENST00000414174 PPHLN1Q8NEY8 458 aaKnown RBP4.27□□□□□ -1.73
SF3B1-203ENST00000414174 TAF4BQ92750 862 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 RPGRQ92834 1020 aaKnown RBP4.27□□□□□ -1.73
SF3B1-203ENST00000414174 TEKT1Q969V4 418 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 E2F7Q96AV8 911 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 PGBD4Q96DM1 585 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 ZBTB10Q96DT7 871 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 VMP1Q96GC9 406 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 ASB16Q96NS5 453 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 SPAG5Q96R06 1193 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 ACBD3Q9H3P7 528 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 ZNF576Q9H609 170 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 PPCSQ9HAB8 311 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 LIN7BQ9HAP6 207 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 ABCB6Q9NP58 842 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 HOMER2Q9NSB8 354 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 GINM1Q9NU53 330 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 DONSONQ9NYP3 566 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 USP25Q9UHP3 1055 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 DDX41Q9UJV9 622 aaKnown RBP4.27□□□□□ -1.73
SF3B1-203ENST00000414174 JAG2Q9Y219 1238 aa4.27□□□□□ -1.73
SF3B1-203ENST00000414174 FAM170AA1A519 330 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 BAIAP3O94812 1187 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 B3GALT4O96024 378 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 RNASE1P07998 156 aaKnown RBP4.26□□□□□ -1.73
SF3B1-203ENST00000414174 ITPKAP23677 461 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 INHBEP58166 350 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 FAAP100Q0VG06 881 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 SPECC1Q5M775 1068 aa4.26□□□□□ -1.73
SF3B1-203ENST00000414174 KIAA1614Q5VZ46 1190 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms