RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 OGFRQ9NZT2 677 aa12.95□□□□□ -0.34
TRAFD1-202ENST00000412615 KLRG2A4D1S0 409 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 OR52Z1P0C646 297 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 COPB1P53618 953 aaKnown RBP12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 STIM1Q13586 685 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 TCP11X2Q5H9J9 407 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 SP8Q8IXZ3 490 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 SMAP1Q8IYB5 467 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 CPVLQ9H3G5 476 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 KBTBD4Q9NVX7 518 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 AFF2P51816 1311 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 SPDYE4A6NLX3 237 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 PP2D1A8MPX8 630 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 KCNJ18B7U540 433 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 CCNT1O60563 726 aaKnown RBP12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 CCT6AP40227 531 aaKnown RBP12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 GTF2IP78347 998 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 KCNJ12Q14500 433 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 ERCC6LQ2NKX8 1250 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 LETM2Q2VYF4 491 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 KMT5BQ4FZB7 885 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 NEK8Q86SG6 692 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 ADSSL1Q8N142 457 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 MNS1Q8NEH6 495 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 COA1Q9GZY4 146 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 VAT1LQ9HCJ6 419 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 GDAQ9Y2T3 454 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 SUGT1Q9Y2Z0 365 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 PARP3Q9Y6F1 533 aa12.94□□□□□ -0.34
TRAFD1-202ENST00000412615 hCG_1984214I3L0E3 225 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 COBLO75128 1261 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 CASP14P31944 242 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 DDR1Q08345 913 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 ORC2Q13416 577 aaPredicted RBP12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 TRIM14Q14142 442 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 CABP7Q86V35 215 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 ZNF713Q8N859 430 aaPredicted RBP12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 VPS16Q9H269 839 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 DDX41Q9UJV9 622 aaKnown RBP12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 DAGLAQ9Y4D2 1042 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 ESYT2A0FGR8 921 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 SOWAHDA6NJG2 315 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 POLRMTO00411 1230 aaKnown RBP12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 GYPCP04921 128 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 RASGRP2Q7LDG7 609 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 UBXN4Q92575 508 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 CCDC47Q96A33 483 aaKnown RBP12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 PIGSQ96S52 555 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 DESI2Q9BSY9 194 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 RIOX1Q9H6W3 641 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 MAPK8IP1Q9UQF2 711 aa12.93□□□□□ -0.34
TRAFD1-202ENST00000412615 USP17L5A8MUK1 530 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 PPEF1O14829 653 aaPredicted RBP12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 FANCGO15287 622 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 RHOBTB3O94955 611 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 HMGB2P26583 209 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 MTF1Q14872 753 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 FBXO38Q6PIJ6 1188 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 TAB2Q9NYJ8 693 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 ADGRG1Q9Y653 693 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 UBR3Q6ZT12 1888 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 DDX60LQ5H9U9 1706 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 PSMA7O14818 248 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 KLRC4O43908 158 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 FECHP22830 423 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 MAP3K9P80192 1104 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 ASPRV1Q53RT3 343 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 RAD9BQ6WBX8 426 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 CREBRFQ8IUR6 639 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 REXO1Q8N1G1 1221 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 GIMAP8Q8ND71 665 aaPredicted RBP12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 WDR24Q96S15 920 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 GTPBP4Q9BZE4 634 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 MTMR4Q9NYA4 1195 aa12.92□□□□□ -0.34
TRAFD1-202ENST00000412615 PLIN4Q96Q06 1357 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 EFCAB8A8MWE9 144 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 PDHBP11177 359 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 EEF1GP26641 437 aaKnown RBP12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 FXR1P51114 621 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 TMTC1Q8IUR5 882 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 TBCKQ8TEA7 893 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 PKNOX2Q96KN3 472 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 PLIN2Q99541 437 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 UBA5Q9GZZ9 404 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 ATP6V0A2Q9Y487 856 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 CDK5RAP2Q96SN8 1893 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 RIMBP2O15034 1052 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 PLCG1P19174 1290 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 AMPD3Q01432 767 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 GABPAQ06546 454 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 PICALMQ13492 652 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 TXNRD1Q16881 649 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 LRRN4CLQ8ND94 238 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 NOC3LQ8WTT2 800 aaKnown RBP12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 DHTKD1Q96HY7 919 aaPredicted RBP12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 CARD6Q9BX69 1037 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 ZC3H12CQ9C0D7 883 aaKnown RBP12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 THAP9Q9H5L6 903 aa12.91□□□□□ -0.34
TRAFD1-202ENST00000412615 H2AFXP16104 143 aaPredicted RBP12.9□□□□□ -0.34
TRAFD1-202ENST00000412615 PPP1R2P41236 205 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms