RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 TRIM29Q14134 588 aa21.55■■□□□ 1.04
CDC42-204ENST00000411827 RASGRP2Q7LDG7 609 aa21.55■■□□□ 1.04
CDC42-204ENST00000411827 PHKBQ93100 1093 aa21.55■■□□□ 1.04
CDC42-204ENST00000411827 AMNQ9BXJ7 453 aa21.55■■□□□ 1.04
CDC42-204ENST00000411827 VAT1LQ9HCJ6 419 aa21.55■■□□□ 1.04
CDC42-204ENST00000411827 FBXO28Q9NVF7 368 aa21.55■■□□□ 1.04
CDC42-204ENST00000411827 GJB2P29033 226 aa21.54■■□□□ 1.04
CDC42-204ENST00000411827 MKRN3Q13064 507 aaKnown RBP21.54■■□□□ 1.04
CDC42-204ENST00000411827 CDC37Q16543 378 aaPredicted RBP21.54■■□□□ 1.04
CDC42-204ENST00000411827 GALNT17Q6IS24 598 aa21.54■■□□□ 1.04
CDC42-204ENST00000411827 CYP4F22Q6NT55 531 aa21.54■■□□□ 1.04
CDC42-204ENST00000411827 PPP1R18Q6NYC8 613 aa21.54■■□□□ 1.04
CDC42-204ENST00000411827 CMTR1Q8N1G2 835 aaKnown RBP21.54■■□□□ 1.04
CDC42-204ENST00000411827 CCDC148Q8NFR7 591 aa21.54■■□□□ 1.04
CDC42-204ENST00000411827 PIGSQ96S52 555 aa21.54■■□□□ 1.04
CDC42-204ENST00000411827 RABGAP1Q9Y3P9 1069 aa21.54■■□□□ 1.04
CDC42-204ENST00000411827 SPDYE16A6NNV3 312 aaPredicted RBP21.53■■□□□ 1.04
CDC42-204ENST00000411827 JAK2O60674 1132 aa21.53■■□□□ 1.04
CDC42-204ENST00000411827 ICAM1P05362 532 aa21.53■■□□□ 1.04
CDC42-204ENST00000411827 HERVK_113P62684 666 aa21.53■■□□□ 1.04
CDC42-204ENST00000411827 DGKZQ13574 1117 aa21.53■■□□□ 1.04
CDC42-204ENST00000411827 TKFCQ3LXA3 575 aa21.53■■□□□ 1.04
CDC42-204ENST00000411827 FBXO11Q86XK2 927 aa21.53■■□□□ 1.04
CDC42-204ENST00000411827 IFNL1Q8IU54 200 aa21.53■■□□□ 1.04
CDC42-204ENST00000411827 SAMD3Q8N6K7 520 aa21.53■■□□□ 1.04
CDC42-204ENST00000411827 FDPSP14324 419 aaKnown RBP21.52■■□□□ 1.04
CDC42-204ENST00000411827 CALML3P27482 149 aa21.52■■□□□ 1.04
CDC42-204ENST00000411827 KIF23Q02241 960 aaPredicted RBP21.52■■□□□ 1.04
CDC42-204ENST00000411827 SLC35G1Q2M3R5 365 aa21.52■■□□□ 1.04
CDC42-204ENST00000411827 QRICH1Q2TAL8 776 aa21.52■■□□□ 1.04
CDC42-204ENST00000411827 HOMER1Q86YM7 354 aa21.52■■□□□ 1.04
CDC42-204ENST00000411827 JMYQ8N9B5 988 aa21.52■■□□□ 1.04
CDC42-204ENST00000411827 SMCR8Q8TEV9 937 aaPredicted RBP21.52■■□□□ 1.04
CDC42-204ENST00000411827 DDX11Q96FC9 970 aa21.52■■□□□ 1.04
CDC42-204ENST00000411827 P2RX7Q99572 595 aaKnown RBP21.52■■□□□ 1.04
CDC42-204ENST00000411827 ALG1Q9BT22 464 aa21.52■■□□□ 1.04
CDC42-204ENST00000411827 BARHL2Q9NY43 387 aa21.52■■□□□ 1.04
CDC42-204ENST00000411827 WDR33Q9C0J8 1336 aaKnown RBP21.52■■□□□ 1.03
CDC42-204ENST00000411827 ESYT2A0FGR8 921 aa21.51■■□□□ 1.03
CDC42-204ENST00000411827 PKN1Q16512 942 aa21.51■■□□□ 1.03
CDC42-204ENST00000411827 LARP1BQ659C4 914 aaKnown RBP21.51■■□□□ 1.03
CDC42-204ENST00000411827 MCTP2Q6DN12 878 aa21.51■■□□□ 1.03
CDC42-204ENST00000411827 ATG4CQ96DT6 458 aa21.51■■□□□ 1.03
CDC42-204ENST00000411827 PTPN18Q99952 460 aa21.51■■□□□ 1.03
CDC42-204ENST00000411827 TEX13BQ9BXU2 312 aa21.51■■□□□ 1.03
CDC42-204ENST00000411827 CPVLQ9H3G5 476 aa21.51■■□□□ 1.03
CDC42-204ENST00000411827 MRPL11Q9Y3B7 192 aaKnown RBP21.51■■□□□ 1.03
CDC42-204ENST00000411827 ABCB11O95342 1321 aa21.51■■□□□ 1.03
CDC42-204ENST00000411827 HEATR3Q7Z4Q2 680 aa21.5■■□□□ 1.03
CDC42-204ENST00000411827 FAM43AQ8N2R8 423 aa21.5■■□□□ 1.03
CDC42-204ENST00000411827 C8orf76Q96K31 380 aa21.5■■□□□ 1.03
CDC42-204ENST00000411827 CIZ1Q9ULV3 898 aaPredicted RBP21.5■■□□□ 1.03
CDC42-204ENST00000411827 PCDHA1Q9Y5I3 950 aa21.5■■□□□ 1.03
CDC42-204ENST00000411827 SLC25A27O95847 323 aa21.49■■□□□ 1.03
CDC42-204ENST00000411827 GNA11P29992 359 aa21.49■■□□□ 1.03
CDC42-204ENST00000411827 CCNA1P78396 465 aa21.49■■□□□ 1.03
CDC42-204ENST00000411827 SAFBQ15424 915 aaKnown RBP eCLIP21.49■■□□□ 1.03
CDC42-204ENST00000411827 IFFO2Q5TF58 517 aa21.49■■□□□ 1.03
CDC42-204ENST00000411827 REPS2Q8NFH8 660 aa21.49■■□□□ 1.03
CDC42-204ENST00000411827 FBXO18Q8NFZ0 1043 aa21.49■■□□□ 1.03
CDC42-204ENST00000411827 BICD2Q8TD16 824 aa21.49■■□□□ 1.03
CDC42-204ENST00000411827 ZFYVE28Q9HCC9 887 aa21.49■■□□□ 1.03
CDC42-204ENST00000411827 BRMS1Q9HCU9 246 aa21.49■■□□□ 1.03
CDC42-204ENST00000411827 MAP3K20Q9NYL2 800 aaKnown RBP21.49■■□□□ 1.03
CDC42-204ENST00000411827 FBXO40Q9UH90 709 aa21.49■■□□□ 1.03
CDC42-204ENST00000411827 STAT3P40763 770 aa21.48■■□□□ 1.03
CDC42-204ENST00000411827 MCF2L2Q86YR7 1114 aa21.48■■□□□ 1.03
CDC42-204ENST00000411827 C6orf50Q9HD87 102 aa21.48■■□□□ 1.03
CDC42-204ENST00000411827 MORF4L1Q9UBU8 362 aa21.48■■□□□ 1.03
CDC42-204ENST00000411827 CCPG1Q9ULG6 757 aa21.48■■□□□ 1.03
CDC42-204ENST00000411827 H3BQV1 296 aa21.47■■□□□ 1.03
CDC42-204ENST00000411827 STXBP3O00186 592 aa21.47■■□□□ 1.03
CDC42-204ENST00000411827 IGF2BP3O00425 579 aaKnown RBP eCLIP21.47■■□□□ 1.03
CDC42-204ENST00000411827 CA12O43570 354 aa21.47■■□□□ 1.03
CDC42-204ENST00000411827 VEGFBP49765 207 aa21.47■■□□□ 1.03
CDC42-204ENST00000411827 MRPL12P52815 198 aaKnown RBP21.47■■□□□ 1.03
CDC42-204ENST00000411827 NAPAP54920 295 aa21.47■■□□□ 1.03
CDC42-204ENST00000411827 NUCB2P80303 420 aa21.47■■□□□ 1.03
CDC42-204ENST00000411827 GRM1Q13255 1194 aa21.47■■□□□ 1.03
CDC42-204ENST00000411827 TAF1CQ15572 869 aaPredicted RBP21.47■■□□□ 1.03
CDC42-204ENST00000411827 WWC2Q6AWC2 1192 aa21.47■■□□□ 1.03
CDC42-204ENST00000411827 SAMD1Q6SPF0 538 aaPredicted RBP21.47■■□□□ 1.03
CDC42-204ENST00000411827 RIOX2Q8IUF8 465 aa21.47■■□□□ 1.03
CDC42-204ENST00000411827 SHCBP1Q8NEM2 672 aa21.47■■□□□ 1.03
CDC42-204ENST00000411827 CHST13Q8NET6 341 aa21.47■■□□□ 1.03
CDC42-204ENST00000411827 GPRC5AQ8NFJ5 357 aa21.47■■□□□ 1.03
CDC42-204ENST00000411827 CFHR5Q9BXR6 569 aa21.47■■□□□ 1.03
CDC42-204ENST00000411827 ZMYND12Q9H0C1 365 aa21.47■■□□□ 1.03
CDC42-204ENST00000411827 ZNF214Q9UL59 606 aaPredicted RBP21.47■■□□□ 1.03
CDC42-204ENST00000411827 TMEM132BQ14DG7 1078 aa21.46■■□□□ 1.03
CDC42-204ENST00000411827 CCDC174Q6PII3 467 aa21.46■■□□□ 1.03
CDC42-204ENST00000411827 PIBF1Q8WXW3 757 aa21.46■■□□□ 1.03
CDC42-204ENST00000411827 FOXD4L1Q9NU39 408 aa21.46■■□□□ 1.03
CDC42-204ENST00000411827 RLFQ13129 1914 aa21.46■■□□□ 1.03
CDC42-204ENST00000411827 ZNF536O15090 1300 aa21.46■■□□□ 1.03
CDC42-204ENST00000411827 PARP14Q460N5 1801 aa21.45■■□□□ 1.03
CDC42-204ENST00000411827 hCG_1642624A0A1W2PR95 340 aa21.45■■□□□ 1.02
CDC42-204ENST00000411827 TLR2O60603 784 aa21.45■■□□□ 1.02
CDC42-204ENST00000411827 SYT1P21579 422 aa21.45■■□□□ 1.02
CDC42-204ENST00000411827 SLC4A3P48751 1232 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms