RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 ESRRAP11474 423 aaPredicted RBP8.16□□□□□ -1.1
LSM5-203ENST00000409782 MYOM1P52179 1685 aa8.16□□□□□ -1.1
LSM5-203ENST00000409782 AP3B2Q13367 1082 aa8.16□□□□□ -1.1
LSM5-203ENST00000409782 ZNF423Q2M1K9 1284 aa8.16□□□□□ -1.1
LSM5-203ENST00000409782 MTERF2Q49AM1 385 aa8.16□□□□□ -1.1
LSM5-203ENST00000409782 GK5Q6ZS86 529 aa8.16□□□□□ -1.1
LSM5-203ENST00000409782 JARID2Q92833 1246 aaPredicted RBP8.16□□□□□ -1.1
LSM5-203ENST00000409782 WNK3Q9BYP7 1800 aa8.16□□□□□ -1.1
LSM5-203ENST00000409782 PARP4Q9UKK3 1724 aaKnown RBP8.16□□□□□ -1.1
LSM5-203ENST00000409782 THRAP3Q9Y2W1 955 aaKnown RBP8.16□□□□□ -1.1
LSM5-203ENST00000409782 SLC12A7Q9Y666 1083 aa8.16□□□□□ -1.1
LSM5-203ENST00000409782 TACC3Q9Y6A5 838 aa8.16□□□□□ -1.1
LSM5-203ENST00000409782 GYS2P54840 703 aa8.15□□□□□ -1.1
LSM5-203ENST00000409782 EVA1CP58658 441 aa8.15□□□□□ -1.1
LSM5-203ENST00000409782 DUOXA2Q1HG44 320 aa8.15□□□□□ -1.1
LSM5-203ENST00000409782 LONRF2Q1L5Z9 754 aa8.15□□□□□ -1.1
LSM5-203ENST00000409782 FOXD4L6Q3SYB3 417 aaPredicted RBP8.15□□□□□ -1.1
LSM5-203ENST00000409782 FBXW10Q5XX13 1052 aa8.15□□□□□ -1.1
LSM5-203ENST00000409782 FOXD4L3Q6VB84 417 aaPredicted RBP8.15□□□□□ -1.1
LSM5-203ENST00000409782 PDZD3Q86UT5 571 aa8.15□□□□□ -1.1
LSM5-203ENST00000409782 TXNRD3Q86VQ6 643 aa8.15□□□□□ -1.1
LSM5-203ENST00000409782 ARHGEF25Q86VW2 580 aa8.15□□□□□ -1.1
LSM5-203ENST00000409782 NME9Q86XW9 330 aa8.15□□□□□ -1.1
LSM5-203ENST00000409782 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.15□□□□□ -1.1
LSM5-203ENST00000409782 TMEM130Q8N3G9 435 aa8.15□□□□□ -1.1
LSM5-203ENST00000409782 TCP11L2Q8N4U5 519 aa8.15□□□□□ -1.1
LSM5-203ENST00000409782 TNKS2Q9H2K2 1166 aa8.15□□□□□ -1.1
LSM5-203ENST00000409782 SOX17Q9H6I2 414 aaPredicted RBP8.15□□□□□ -1.1
LSM5-203ENST00000409782 AKTIPQ9H8T0 292 aa8.15□□□□□ -1.1
LSM5-203ENST00000409782 PLAAQ9Y263 795 aa8.15□□□□□ -1.1
LSM5-203ENST00000409782 RGPD1P0DJD0 1748 aa8.15□□□□□ -1.11
LSM5-203ENST00000409782 LRRC37A3O60309 1634 aa8.14□□□□□ -1.11
LSM5-203ENST00000409782 WDR17Q8IZU2 1322 aa8.14□□□□□ -1.11
LSM5-203ENST00000409782 GJB6O95452 261 aa8.14□□□□□ -1.11
LSM5-203ENST00000409782 PROCP04070 461 aa8.14□□□□□ -1.11
LSM5-203ENST00000409782 AMPD3Q01432 767 aa8.14□□□□□ -1.11
LSM5-203ENST00000409782 TCEA2Q15560 299 aa8.14□□□□□ -1.11
LSM5-203ENST00000409782 ZC3H12BQ5HYM0 836 aaKnown RBP8.14□□□□□ -1.11
LSM5-203ENST00000409782 LARP1BQ659C4 914 aaKnown RBP8.14□□□□□ -1.11
LSM5-203ENST00000409782 NOL8Q76FK4 1167 aaKnown RBP8.14□□□□□ -1.11
LSM5-203ENST00000409782 WFDC12Q8WWY7 111 aa8.14□□□□□ -1.11
LSM5-203ENST00000409782 ST7Q9NRC1 585 aa8.14□□□□□ -1.11
LSM5-203ENST00000409782 KLHL42Q9P2K6 505 aa8.14□□□□□ -1.11
LSM5-203ENST00000409782 POLR3KQ9Y2Y1 108 aaPredicted RBP8.14□□□□□ -1.11
LSM5-203ENST00000409782 PCDHB14Q9Y5E9 798 aa8.14□□□□□ -1.11
LSM5-203ENST00000409782 DISP2A7MBM2 1401 aa8.13□□□□□ -1.11
LSM5-203ENST00000409782 LTN1O94822 1766 aa8.13□□□□□ -1.11
LSM5-203ENST00000409782 GUCY2CP25092 1073 aa8.13□□□□□ -1.11
LSM5-203ENST00000409782 IREB2P48200 963 aaKnown RBP8.13□□□□□ -1.11
LSM5-203ENST00000409782 NLRP12P59046 1061 aa8.13□□□□□ -1.11
LSM5-203ENST00000409782 GSTM4Q03013 218 aa8.13□□□□□ -1.11
LSM5-203ENST00000409782 ACAD11Q709F0 780 aa8.13□□□□□ -1.11
LSM5-203ENST00000409782 STK35Q8TDR2 534 aa8.13□□□□□ -1.11
LSM5-203ENST00000409782 IRF2BPLQ9H1B7 796 aa8.13□□□□□ -1.11
LSM5-203ENST00000409782 DDX56Q9NY93 547 aaKnown RBP8.13□□□□□ -1.11
LSM5-203ENST00000409782 KCNK4Q9NYG8 393 aa8.13□□□□□ -1.11
LSM5-203ENST00000409782 FAM208AQ9UK61 1670 aaKnown RBP8.13□□□□□ -1.11
LSM5-203ENST00000409782 KIF20BQ96Q89 1820 aa8.13□□□□□ -1.11
LSM5-203ENST00000409782 TNS1Q9HBL0 1735 aaKnown RBP8.12□□□□□ -1.11
LSM5-203ENST00000409782 RTL1A6NKG5 1358 aa8.12□□□□□ -1.11
LSM5-203ENST00000409782 CCDC7Q96M83 1385 aa8.12□□□□□ -1.11
LSM5-203ENST00000409782 A0A1W2PQH9 124 aa8.12□□□□□ -1.11
LSM5-203ENST00000409782 F8W735 103 aaPredicted RBP8.12□□□□□ -1.11
LSM5-203ENST00000409782 TM4SF5O14894 197 aa8.12□□□□□ -1.11
LSM5-203ENST00000409782 DDX3YO15523 660 aaKnown RBP8.12□□□□□ -1.11
LSM5-203ENST00000409782 MASP1P48740 699 aa8.12□□□□□ -1.11
LSM5-203ENST00000409782 PLEKHG6Q3KR16 790 aa8.12□□□□□ -1.11
LSM5-203ENST00000409782 HGSNATQ68CP4 663 aa8.12□□□□□ -1.11
LSM5-203ENST00000409782 KRT26Q7Z3Y9 468 aa8.12□□□□□ -1.11
LSM5-203ENST00000409782 FAM178BQ8IXR5 827 aa8.12□□□□□ -1.11
LSM5-203ENST00000409782 TMEM40Q8WWA1 233 aa8.12□□□□□ -1.11
LSM5-203ENST00000409782 EPN3Q9H201 632 aa8.12□□□□□ -1.11
LSM5-203ENST00000409782 ZMYM5Q9UJ78 669 aa8.12□□□□□ -1.11
LSM5-203ENST00000409782 LEMD3Q9Y2U8 911 aa8.12□□□□□ -1.11
LSM5-203ENST00000409782 OVOS2A0A0G2JMS6 1433 aa8.12□□□□□ -1.11
LSM5-203ENST00000409782 ADAM11O75078 769 aa8.11□□□□□ -1.11
LSM5-203ENST00000409782 NOS3P29474 1203 aa8.11□□□□□ -1.11
LSM5-203ENST00000409782 ZNF157P51786 506 aaPredicted RBP8.11□□□□□ -1.11
LSM5-203ENST00000409782 NCAPHQ15003 741 aa8.11□□□□□ -1.11
LSM5-203ENST00000409782 INTS3Q68E01 1043 aaKnown RBP8.11□□□□□ -1.11
LSM5-203ENST00000409782 TOM1L2Q6ZVM7 507 aa8.11□□□□□ -1.11
LSM5-203ENST00000409782 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.11□□□□□ -1.11
LSM5-203ENST00000409782 TTC6Q86TZ1 520 aa8.11□□□□□ -1.11
LSM5-203ENST00000409782 ZSWIM2Q8NEG5 633 aa8.11□□□□□ -1.11
LSM5-203ENST00000409782 GRIN3AQ8TCU5 1115 aa8.11□□□□□ -1.11
LSM5-203ENST00000409782 COG3Q96JB2 828 aa8.11□□□□□ -1.11
LSM5-203ENST00000409782 USP26Q9BXU7 913 aa8.11□□□□□ -1.11
LSM5-203ENST00000409782 KRT82Q9NSB4 513 aa8.11□□□□□ -1.11
LSM5-203ENST00000409782 PTCH2Q9Y6C5 1203 aa8.11□□□□□ -1.11
LSM5-203ENST00000409782 SNCAIPQ9Y6H5 919 aa8.11□□□□□ -1.11
LSM5-203ENST00000409782 PEAK1Q9H792 1746 aa8.11□□□□□ -1.11
LSM5-203ENST00000409782 TNS2Q63HR2 1409 aa8.11□□□□□ -1.11
LSM5-203ENST00000409782 NSD3Q9BZ95 1437 aa8.11□□□□□ -1.11
LSM5-203ENST00000409782 RGPD5Q99666 1765 aa8.1□□□□□ -1.11
LSM5-203ENST00000409782 UPK3BL1B0FP48 263 aa8.1□□□□□ -1.11
LSM5-203ENST00000409782 UPK3BL2E5RIL1 263 aa8.1□□□□□ -1.11
LSM5-203ENST00000409782 ALX3O95076 343 aa8.1□□□□□ -1.11
LSM5-203ENST00000409782 WISP1O95388 367 aa8.1□□□□□ -1.11
LSM5-203ENST00000409782 CYP11A1P05108 521 aa8.1□□□□□ -1.11
LSM5-203ENST00000409782 GSTP1P09211 210 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms