RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 KCNG4Q8TDN1 519 aa14.27□□□□□ -0.13
CHMP3-204ENST00000409727 CDCA5Q96FF9 252 aa14.27□□□□□ -0.13
CHMP3-204ENST00000409727 FBXO28Q9NVF7 368 aa14.27□□□□□ -0.13
CHMP3-204ENST00000409727 BIN2Q9UBW5 565 aaPredicted RBP14.27□□□□□ -0.13
CHMP3-204ENST00000409727 NOL7Q9UMY1 257 aaKnown RBP14.27□□□□□ -0.13
CHMP3-204ENST00000409727 WNT7AO00755 349 aa14.26□□□□□ -0.13
CHMP3-204ENST00000409727 LIG1P18858 919 aa14.26□□□□□ -0.13
CHMP3-204ENST00000409727 ADCY7P51828 1080 aa14.26□□□□□ -0.13
CHMP3-204ENST00000409727 TTLL12Q14166 644 aaPredicted RBP14.26□□□□□ -0.13
CHMP3-204ENST00000409727 SLC39A14Q15043 492 aa14.26□□□□□ -0.13
CHMP3-204ENST00000409727 ZNF174Q15697 407 aa14.26□□□□□ -0.13
CHMP3-204ENST00000409727 GALNT17Q6IS24 598 aa14.26□□□□□ -0.13
CHMP3-204ENST00000409727 DAGLBQ8NCG7 672 aa14.26□□□□□ -0.13
CHMP3-204ENST00000409727 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.26□□□□□ -0.13
CHMP3-204ENST00000409727 ZC3H15Q8WU90 426 aaKnown RBP14.26□□□□□ -0.13
CHMP3-204ENST00000409727 KIAA1683Q9H0B3 1180 aa14.26□□□□□ -0.13
CHMP3-204ENST00000409727 GINM1Q9NU53 330 aa14.26□□□□□ -0.13
CHMP3-204ENST00000409727 TMEM260Q9NX78 707 aa14.26□□□□□ -0.13
CHMP3-204ENST00000409727 PCDHA1Q9Y5I3 950 aa14.26□□□□□ -0.13
CHMP3-204ENST00000409727 hCG_1984214I3L0E3 225 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 M0R2N6 131 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 PPP1R12BO60237 982 aaPredicted RBP14.25□□□□□ -0.13
CHMP3-204ENST00000409727 VGLL4Q14135 290 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 PTPAQ15257 358 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 JAKMIP3Q5VZ66 844 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 CCDC174Q6PII3 467 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 BTNL9Q6UXG8 535 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 MOB2Q70IA6 237 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 CCAR1Q8IX12 1150 aaKnown RBP14.25□□□□□ -0.13
CHMP3-204ENST00000409727 ZNF713Q8N859 430 aaPredicted RBP14.25□□□□□ -0.13
CHMP3-204ENST00000409727 ZNF280CQ8ND82 737 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 TANGO6Q9C0B7 1094 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 AS3MTQ9HBK9 375 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 MRVI1Q9Y6F6 885 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 NF2P35240 595 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 GSE1Q14687 1217 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 UBE2SQ16763 222 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 INF2Q27J81 1249 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 ZSCAN23Q3MJ62 389 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 TTC38Q5R3I4 469 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.25□□□□□ -0.13
CHMP3-204ENST00000409727 PNMA8AQ86V59 439 aaPredicted RBP14.25□□□□□ -0.13
CHMP3-204ENST00000409727 FBXO11Q86XK2 927 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 REXO1Q8N1G1 1221 aaKnown RBP14.25□□□□□ -0.13
CHMP3-204ENST00000409727 CHURC1Q8WUH1 139 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 AMNQ9BXJ7 453 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 EMILIN3Q9NT22 766 aa14.25□□□□□ -0.13
CHMP3-204ENST00000409727 SCN4AP35499 1836 aa14.24□□□□□ -0.13
CHMP3-204ENST00000409727 ATXN8OSP0DMR3 200 aa14.24□□□□□ -0.13
CHMP3-204ENST00000409727 VCAM1P19320 739 aa14.24□□□□□ -0.13
CHMP3-204ENST00000409727 MCM7P33993 719 aa14.24□□□□□ -0.13
CHMP3-204ENST00000409727 HMGCS2P54868 508 aa14.24□□□□□ -0.13
CHMP3-204ENST00000409727 BACE1P56817 501 aa14.24□□□□□ -0.13
CHMP3-204ENST00000409727 MAP3K9P80192 1104 aa14.24□□□□□ -0.13
CHMP3-204ENST00000409727 MAP1SQ66K74 1059 aaPredicted RBP14.24□□□□□ -0.13
CHMP3-204ENST00000409727 ZNF526Q8TF50 670 aaPredicted RBP14.24□□□□□ -0.13
CHMP3-204ENST00000409727 LPAR1Q92633 364 aa14.24□□□□□ -0.13
CHMP3-204ENST00000409727 SYAP1Q96A49 352 aaPredicted RBP14.24□□□□□ -0.13
CHMP3-204ENST00000409727 GOLPH3LQ9H4A5 285 aa14.24□□□□□ -0.13
CHMP3-204ENST00000409727 ZNF408Q9H9D4 720 aa14.24□□□□□ -0.13
CHMP3-204ENST00000409727 RRAGCQ9HB90 399 aa14.24□□□□□ -0.13
CHMP3-204ENST00000409727 FEM1BQ9UK73 627 aa14.24□□□□□ -0.13
CHMP3-204ENST00000409727 ESYT2A0FGR8 921 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 WDR46O15213 610 aaKnown RBP14.23□□□□□ -0.13
CHMP3-204ENST00000409727 PPP1R18Q6NYC8 613 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 JMYQ8N9B5 988 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 FSIP1Q8NA03 581 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 CLIC6Q96NY7 704 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 WDR18Q9BV38 432 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 RPAP3Q9H6T3 665 aaPredicted RBP14.23□□□□□ -0.13
CHMP3-204ENST00000409727 PSTPIP2Q9H939 334 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 RIC8AQ9NPQ8 531 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 CSADQ9Y600 493 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 SNCAIPQ9Y6H5 919 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 WDR90Q96KV7 1748 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 A0A1B0GVL5 298 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 SYCE3A1L190 88 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 NR1I2O75469 434 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 FLOT1O75955 427 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 IREB2P48200 963 aaKnown RBP14.23□□□□□ -0.13
CHMP3-204ENST00000409727 USP14P54578 494 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 FMR1Q06787 632 aaKnown RBP eCLIP14.23□□□□□ -0.13
CHMP3-204ENST00000409727 NOL9Q5SY16 702 aaKnown RBP14.23□□□□□ -0.13
CHMP3-204ENST00000409727 ADALQ6DHV7 355 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 FAM160B2Q86V87 743 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 FAM177A1Q8N128 213 aaPredicted RBP14.23□□□□□ -0.13
CHMP3-204ENST00000409727 CUL5Q93034 780 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.23□□□□□ -0.13
CHMP3-204ENST00000409727 DACT1Q9NYF0 836 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 CEP131Q9UPN4 1083 aa14.23□□□□□ -0.13
CHMP3-204ENST00000409727 USP17L15C9J2P7 530 aa14.22□□□□□ -0.13
CHMP3-204ENST00000409727 USP17L13C9JLJ4 530 aa14.22□□□□□ -0.13
CHMP3-204ENST00000409727 USP17L11C9JVI0 530 aa14.22□□□□□ -0.13
CHMP3-204ENST00000409727 USP17L18D6R9N7 530 aa14.22□□□□□ -0.13
CHMP3-204ENST00000409727 USP17L22D6RA61 530 aa14.22□□□□□ -0.13
CHMP3-204ENST00000409727 USP17L17D6RBQ6 530 aa14.22□□□□□ -0.13
CHMP3-204ENST00000409727 USP17L19D6RCP7 530 aa14.22□□□□□ -0.13
CHMP3-204ENST00000409727 USP17L20D6RJB6 530 aa14.22□□□□□ -0.13
CHMP3-204ENST00000409727 TRAF5O00463 557 aa14.22□□□□□ -0.13
CHMP3-204ENST00000409727 PPP6R2O75170 966 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms