RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 ZNF536O15090 1300 aa19.27■□□□□ 0.68
SUMO1-208ENST00000409627 MGAMO43451 1857 aa19.27■□□□□ 0.68
SUMO1-208ENST00000409627 CPLX1O14810 134 aa19.27■□□□□ 0.68
SUMO1-208ENST00000409627 CDKL5O76039 1030 aa19.27■□□□□ 0.68
SUMO1-208ENST00000409627 ERVK-9P63128 1117 aa19.27■□□□□ 0.68
SUMO1-208ENST00000409627 ERVK-24P63145 666 aa19.27■□□□□ 0.68
SUMO1-208ENST00000409627 ST3GAL1Q11201 340 aa19.27■□□□□ 0.68
SUMO1-208ENST00000409627 NOM1Q5C9Z4 860 aaKnown RBP19.27■□□□□ 0.68
SUMO1-208ENST00000409627 NECAB1Q8N987 351 aa19.27■□□□□ 0.68
SUMO1-208ENST00000409627 GPRC5AQ8NFJ5 357 aa19.27■□□□□ 0.68
SUMO1-208ENST00000409627 RRP36Q96EU6 259 aaKnown RBP19.27■□□□□ 0.68
SUMO1-208ENST00000409627 TMX3Q96JJ7 454 aa19.27■□□□□ 0.68
SUMO1-208ENST00000409627 R3HDMLQ9H3Y0 253 aa19.27■□□□□ 0.68
SUMO1-208ENST00000409627 ZBTB5O15062 677 aa19.26■□□□□ 0.67
SUMO1-208ENST00000409627 ICAM1P05362 532 aa19.26■□□□□ 0.67
SUMO1-208ENST00000409627 SNAP25P60880 206 aa19.26■□□□□ 0.67
SUMO1-208ENST00000409627 QRICH1Q2TAL8 776 aa19.26■□□□□ 0.67
SUMO1-208ENST00000409627 CCDC174Q6PII3 467 aa19.26■□□□□ 0.67
SUMO1-208ENST00000409627 CCDC82Q8N4S0 544 aa19.26■□□□□ 0.67
SUMO1-208ENST00000409627 PIGSQ96S52 555 aa19.26■□□□□ 0.67
SUMO1-208ENST00000409627 TEX13BQ9BXU2 312 aa19.26■□□□□ 0.67
SUMO1-208ENST00000409627 RNF26Q9BY78 433 aaPredicted RBP19.26■□□□□ 0.67
SUMO1-208ENST00000409627 SPATC1LQ9H0A9 340 aa19.26■□□□□ 0.67
SUMO1-208ENST00000409627 RBM27Q9P2N5 1060 aaKnown RBP19.26■□□□□ 0.67
SUMO1-208ENST00000409627 RBBP6Q7Z6E9 1792 aaKnown RBP19.26■□□□□ 0.67
SUMO1-208ENST00000409627 PNMA6FA0A0J9YX94 578 aa19.25■□□□□ 0.67
SUMO1-208ENST00000409627 PRPF3O43395 683 aaKnown RBP19.25■□□□□ 0.67
SUMO1-208ENST00000409627 STAT3P40763 770 aa19.25■□□□□ 0.67
SUMO1-208ENST00000409627 HOMER1Q86YM7 354 aa19.25■□□□□ 0.67
SUMO1-208ENST00000409627 CCDC83Q8IWF9 413 aa19.25■□□□□ 0.67
SUMO1-208ENST00000409627 CPXCR1Q8N123 301 aa19.25■□□□□ 0.67
SUMO1-208ENST00000409627 RAVER2Q9HCJ3 691 aaKnown RBP19.25■□□□□ 0.67
SUMO1-208ENST00000409627 SEC63Q9UGP8 760 aaKnown RBP19.25■□□□□ 0.67
SUMO1-208ENST00000409627 SMCHD1A6NHR9 2005 aa19.24■□□□□ 0.67
SUMO1-208ENST00000409627 K7ELQ4 463 aaPredicted RBP19.24■□□□□ 0.67
SUMO1-208ENST00000409627 PEX10O60683 326 aa19.24■□□□□ 0.67
SUMO1-208ENST00000409627 CTDNEP1O95476 244 aa19.24■□□□□ 0.67
SUMO1-208ENST00000409627 COPB2P35606 906 aa19.24■□□□□ 0.67
SUMO1-208ENST00000409627 CCNA1P78396 465 aa19.24■□□□□ 0.67
SUMO1-208ENST00000409627 PLS1Q14651 629 aa19.24■□□□□ 0.67
SUMO1-208ENST00000409627 Q3C1V9 767 aa19.24■□□□□ 0.67
SUMO1-208ENST00000409627 SNRNP48Q6IEG0 339 aaKnown RBP19.24■□□□□ 0.67
SUMO1-208ENST00000409627 RIOX2Q8IUF8 465 aa19.24■□□□□ 0.67
SUMO1-208ENST00000409627 HSCBQ8IWL3 235 aa19.24■□□□□ 0.67
SUMO1-208ENST00000409627 SHCBP1Q8NEM2 672 aa19.24■□□□□ 0.67
SUMO1-208ENST00000409627 PHKBQ93100 1093 aa19.24■□□□□ 0.67
SUMO1-208ENST00000409627 LLPHQ9BRT6 129 aaKnown RBP19.24■□□□□ 0.67
SUMO1-208ENST00000409627 AMNQ9BXJ7 453 aa19.24■□□□□ 0.67
SUMO1-208ENST00000409627 MOV10L1Q9BXT6 1211 aaKnown RBP19.24■□□□□ 0.67
SUMO1-208ENST00000409627 CCPG1Q9ULG6 757 aa19.24■□□□□ 0.67
SUMO1-208ENST00000409627 STK36Q9NRP7 1315 aa19.24■□□□□ 0.67
SUMO1-208ENST00000409627 PLXNB2O15031 1838 aa19.23■□□□□ 0.67
SUMO1-208ENST00000409627 GPR25O00155 361 aa19.23■□□□□ 0.67
SUMO1-208ENST00000409627 FMNL1O95466 1100 aaPredicted RBP19.23■□□□□ 0.67
SUMO1-208ENST00000409627 SLC25A27O95847 323 aa19.23■□□□□ 0.67
SUMO1-208ENST00000409627 SSRP1Q08945 709 aaKnown RBP19.23■□□□□ 0.67
SUMO1-208ENST00000409627 TRAF1Q13077 416 aa19.23■□□□□ 0.67
SUMO1-208ENST00000409627 TKFCQ3LXA3 575 aa19.23■□□□□ 0.67
SUMO1-208ENST00000409627 FBXO11Q86XK2 927 aa19.23■□□□□ 0.67
SUMO1-208ENST00000409627 TRIM22Q8IYM9 498 aa19.23■□□□□ 0.67
SUMO1-208ENST00000409627 NSUN7Q8NE18 718 aaKnown RBP19.23■□□□□ 0.67
SUMO1-208ENST00000409627 AGBL1Q96MI9 1066 aa19.23■□□□□ 0.67
SUMO1-208ENST00000409627 SLC26A6Q9BXS9 759 aa19.23■□□□□ 0.67
SUMO1-208ENST00000409627 V9GY48 417 aaPredicted RBP19.23■□□□□ 0.67
SUMO1-208ENST00000409627 PPP1R11O60927 126 aaPredicted RBP19.22■□□□□ 0.67
SUMO1-208ENST00000409627 AKAP17AQ02040 695 aaKnown RBP19.22■□□□□ 0.67
SUMO1-208ENST00000409627 SP3Q02447 781 aa19.22■□□□□ 0.67
SUMO1-208ENST00000409627 PIBF1Q8WXW3 757 aa19.22■□□□□ 0.67
SUMO1-208ENST00000409627 CEP350Q5VT06 3117 aa19.22■□□□□ 0.67
SUMO1-208ENST00000409627 ABCB11O95342 1321 aa19.22■□□□□ 0.67
SUMO1-208ENST00000409627 ZSWIM8A7E2V4 1837 aa19.21■□□□□ 0.67
SUMO1-208ENST00000409627 ZNF236Q9UL36 1845 aa19.21■□□□□ 0.67
SUMO1-208ENST00000409627 hCG_1642624A0A1W2PR95 340 aa19.21■□□□□ 0.67
SUMO1-208ENST00000409627 PTPDC1A2A3K4 754 aa19.21■□□□□ 0.67
SUMO1-208ENST00000409627 hCG_1984214I3L0E3 225 aa19.21■□□□□ 0.67
SUMO1-208ENST00000409627 DEXIO95424 95 aa19.21■□□□□ 0.67
SUMO1-208ENST00000409627 CUL4AQ13619 759 aa19.21■□□□□ 0.67
SUMO1-208ENST00000409627 PFKFB3Q16875 520 aaPredicted RBP19.21■□□□□ 0.67
SUMO1-208ENST00000409627 ZNF713Q8N859 430 aaPredicted RBP19.21■□□□□ 0.67
SUMO1-208ENST00000409627 PORCNQ9H237 461 aa19.21■□□□□ 0.67
SUMO1-208ENST00000409627 MROH8Q9H579 483 aa19.21■□□□□ 0.67
SUMO1-208ENST00000409627 RIPK3Q9Y572 518 aa19.21■□□□□ 0.67
SUMO1-208ENST00000409627 ALAS1P13196 640 aa19.2■□□□□ 0.66
SUMO1-208ENST00000409627 SCG2P13521 617 aa19.2■□□□□ 0.66
SUMO1-208ENST00000409627 ERCC3P19447 782 aa19.2■□□□□ 0.66
SUMO1-208ENST00000409627 MAPK4P31152 587 aa19.2■□□□□ 0.66
SUMO1-208ENST00000409627 LACTBP83111 547 aaPredicted RBP19.2■□□□□ 0.66
SUMO1-208ENST00000409627 PKN1Q16512 942 aa19.2■□□□□ 0.66
SUMO1-208ENST00000409627 USH1GQ495M9 461 aa19.2■□□□□ 0.66
SUMO1-208ENST00000409627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.2■□□□□ 0.66
SUMO1-208ENST00000409627 NCAPG2Q86XI2 1143 aa19.2■□□□□ 0.66
SUMO1-208ENST00000409627 CHST13Q8NET6 341 aa19.2■□□□□ 0.66
SUMO1-208ENST00000409627 SMARCC2Q8TAQ2 1214 aa19.2■□□□□ 0.66
SUMO1-208ENST00000409627 FBXO40Q9UH90 709 aa19.2■□□□□ 0.66
SUMO1-208ENST00000409627 TSKSQ9UJT2 592 aa19.2■□□□□ 0.66
SUMO1-208ENST00000409627 PCDHA1Q9Y5I3 950 aa19.2■□□□□ 0.66
SUMO1-208ENST00000409627 JAK2O60674 1132 aa19.19■□□□□ 0.66
SUMO1-208ENST00000409627 FKTNO75072 461 aa19.19■□□□□ 0.66
SUMO1-208ENST00000409627 PPFIA3O75145 1194 aa19.19■□□□□ 0.66
SUMO1-208ENST00000409627 HSPA1AP0DMV8 641 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms