RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 TMEM260Q9NX78 707 aa17.97■□□□□ 0.47
SHANK2-204ENST00000409530 BIN2Q9UBW5 565 aaPredicted RBP17.97■□□□□ 0.47
SHANK2-204ENST00000409530 FEM1BQ9UK73 627 aa17.97■□□□□ 0.47
SHANK2-204ENST00000409530 PCDHA4Q9UN74 947 aa17.97■□□□□ 0.47
SHANK2-204ENST00000409530 U2AF2P26368 475 aaKnown RBP eCLIP17.96■□□□□ 0.47
SHANK2-204ENST00000409530 TREML2Q5T2D2 321 aa17.96■□□□□ 0.47
SHANK2-204ENST00000409530 JAKMIP3Q5VZ66 844 aa17.96■□□□□ 0.47
SHANK2-204ENST00000409530 CLEC17AQ6ZS10 378 aa17.96■□□□□ 0.47
SHANK2-204ENST00000409530 FBXO11Q86XK2 927 aa17.96■□□□□ 0.47
SHANK2-204ENST00000409530 CCDC12Q8WUD4 166 aaPredicted RBP17.96■□□□□ 0.47
SHANK2-204ENST00000409530 WNK4Q96J92 1243 aa17.96■□□□□ 0.47
SHANK2-204ENST00000409530 FOXP1Q9H334 677 aaPredicted RBP17.96■□□□□ 0.47
SHANK2-204ENST00000409530 GBA2Q9HCG7 927 aaPredicted RBP17.96■□□□□ 0.47
SHANK2-204ENST00000409530 CALML3P27482 149 aa17.96■□□□□ 0.47
SHANK2-204ENST00000409530 ADCY7P51828 1080 aa17.96■□□□□ 0.47
SHANK2-204ENST00000409530 ZNF396Q96N95 335 aaPredicted RBP17.96■□□□□ 0.47
SHANK2-204ENST00000409530 C6orf50Q9HD87 102 aa17.96■□□□□ 0.47
SHANK2-204ENST00000409530 SH3GLB2Q9NR46 395 aa17.96■□□□□ 0.47
SHANK2-204ENST00000409530 HOMER2Q9NSB8 354 aa17.96■□□□□ 0.47
SHANK2-204ENST00000409530 COL11A1P12107 1806 aaPredicted RBP17.95■□□□□ 0.46
SHANK2-204ENST00000409530 PARP14Q460N5 1801 aa17.95■□□□□ 0.46
SHANK2-204ENST00000409530 CHADLQ6NUI6 762 aa17.95■□□□□ 0.46
SHANK2-204ENST00000409530 BTNL9Q6UXG8 535 aa17.95■□□□□ 0.46
SHANK2-204ENST00000409530 ERO1BQ86YB8 467 aa17.95■□□□□ 0.46
SHANK2-204ENST00000409530 MTMR8Q96EF0 704 aa17.95■□□□□ 0.46
SHANK2-204ENST00000409530 AMNQ9BXJ7 453 aa17.95■□□□□ 0.46
SHANK2-204ENST00000409530 LMBRD1Q9NUN5 540 aa17.95■□□□□ 0.46
SHANK2-204ENST00000409530 CTDP1Q9Y5B0 961 aaPredicted RBP17.95■□□□□ 0.46
SHANK2-204ENST00000409530 FAM160B2Q86V87 743 aa17.95■□□□□ 0.46
SHANK2-204ENST00000409530 LEO1Q8WVC0 666 aaPredicted RBP17.95■□□□□ 0.46
SHANK2-204ENST00000409530 ATG4CQ96DT6 458 aa17.95■□□□□ 0.46
SHANK2-204ENST00000409530 CCDC194A0A1B0GVG4 234 aa17.94■□□□□ 0.46
SHANK2-204ENST00000409530 SPDYE5A6NIY4 337 aa17.94■□□□□ 0.46
SHANK2-204ENST00000409530 WNT7AO00755 349 aa17.94■□□□□ 0.46
SHANK2-204ENST00000409530 STK38Q15208 465 aa17.94■□□□□ 0.46
SHANK2-204ENST00000409530 SF3A1Q15459 793 aaKnown RBP17.94■□□□□ 0.46
SHANK2-204ENST00000409530 REXO1Q8N1G1 1221 aaKnown RBP17.94■□□□□ 0.46
SHANK2-204ENST00000409530 SLC10A4Q96EP9 437 aa17.94■□□□□ 0.46
SHANK2-204ENST00000409530 AGBL1Q96MI9 1066 aa17.94■□□□□ 0.46
SHANK2-204ENST00000409530 ZMYND12Q9H0C1 365 aa17.94■□□□□ 0.46
SHANK2-204ENST00000409530 PCDHA6Q9UN73 950 aa17.94■□□□□ 0.46
SHANK2-204ENST00000409530 PCDHA8Q9Y5H6 950 aa17.94■□□□□ 0.46
SHANK2-204ENST00000409530 USP17L15C9J2P7 530 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 C19orf81C9J6K1 198 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 USP17L13C9JLJ4 530 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 USP17L11C9JVI0 530 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 USP17L18D6R9N7 530 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 USP17L22D6RA61 530 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 USP17L17D6RBQ6 530 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 USP17L19D6RCP7 530 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 USP17L20D6RJB6 530 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 PEX10O60683 326 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 GJA5P36382 358 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 USP17L24Q0WX57 530 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 USP17L6PQ6QN14 398 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 C2orf69Q8N8R5 385 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 RAVER2Q9HCJ3 691 aaKnown RBP17.93■□□□□ 0.46
SHANK2-204ENST00000409530 CFAP45Q9UL16 551 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 MARCKSP29966 332 aaPredicted RBP17.93■□□□□ 0.46
SHANK2-204ENST00000409530 GNA11P29992 359 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 PPATQ06203 517 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 MAP3K11Q16584 847 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 INF2Q27J81 1249 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 PRPF38AQ8NAV1 312 aaKnown RBP17.93■□□□□ 0.46
SHANK2-204ENST00000409530 GZF1Q9H116 711 aaPredicted RBP17.93■□□□□ 0.46
SHANK2-204ENST00000409530 RANBP17Q9H2T7 1088 aaKnown RBP17.93■□□□□ 0.46
SHANK2-204ENST00000409530 CCPG1Q9ULG6 757 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 PCDHB6Q9Y5E3 794 aa17.93■□□□□ 0.46
SHANK2-204ENST00000409530 DDX49Q9Y6V7 483 aaKnown RBP17.93■□□□□ 0.46
SHANK2-204ENST00000409530 hCG_1984214I3L0E3 225 aa17.92■□□□□ 0.46
SHANK2-204ENST00000409530 HOXA13P31271 388 aaPredicted RBP17.92■□□□□ 0.46
SHANK2-204ENST00000409530 TOB1P50616 345 aaPredicted RBP17.92■□□□□ 0.46
SHANK2-204ENST00000409530 ANO1Q5XXA6 986 aa17.92■□□□□ 0.46
SHANK2-204ENST00000409530 ZNF713Q8N859 430 aaPredicted RBP17.92■□□□□ 0.46
SHANK2-204ENST00000409530 CUL5Q93034 780 aa17.92■□□□□ 0.46
SHANK2-204ENST00000409530 TNFRSF25Q93038 417 aa17.92■□□□□ 0.46
SHANK2-204ENST00000409530 SCAND2PQ9GZW5 306 aaPredicted RBP17.92■□□□□ 0.46
SHANK2-204ENST00000409530 PSTPIP2Q9H939 334 aa17.92■□□□□ 0.46
SHANK2-204ENST00000409530 PPP1R9AQ9ULJ8 1098 aa17.92■□□□□ 0.46
SHANK2-204ENST00000409530 MRVI1Q9Y6F6 885 aa17.92■□□□□ 0.46
SHANK2-204ENST00000409530 TRPM7Q96QT4 1865 aa17.92■□□□□ 0.46
SHANK2-204ENST00000409530 LOC285556D6RIA3 1793 aa17.92■□□□□ 0.46
SHANK2-204ENST00000409530 ME1P48163 572 aa17.92■□□□□ 0.46
SHANK2-204ENST00000409530 PLS1Q14651 629 aa17.92■□□□□ 0.46
SHANK2-204ENST00000409530 CST9Q5W186 159 aa17.92■□□□□ 0.46
SHANK2-204ENST00000409530 TRAK2O60296 914 aa17.91■□□□□ 0.46
SHANK2-204ENST00000409530 ITGBL1O95965 494 aaPredicted RBP17.91■□□□□ 0.46
SHANK2-204ENST00000409530 ALAS1P13196 640 aa17.91■□□□□ 0.46
SHANK2-204ENST00000409530 PPIL2Q13356 520 aa17.91■□□□□ 0.46
SHANK2-204ENST00000409530 LDLRAD1Q5T700 205 aa17.91■□□□□ 0.46
SHANK2-204ENST00000409530 RBM46Q8TBY0 533 aaKnown RBP17.91■□□□□ 0.46
SHANK2-204ENST00000409530 NOL7Q9UMY1 257 aaKnown RBP17.91■□□□□ 0.46
SHANK2-204ENST00000409530 GOLGA6L4A6NEF3 574 aa17.9■□□□□ 0.46
SHANK2-204ENST00000409530 CFBP00751 764 aa17.9■□□□□ 0.46
SHANK2-204ENST00000409530 MCM7P33993 719 aa17.9■□□□□ 0.46
SHANK2-204ENST00000409530 HUNKP57058 714 aa17.9■□□□□ 0.46
SHANK2-204ENST00000409530 ZNF174Q15697 407 aa17.9■□□□□ 0.46
SHANK2-204ENST00000409530 C12orf42Q96LP6 360 aa17.9■□□□□ 0.46
SHANK2-204ENST00000409530 RLFQ13129 1914 aa17.9■□□□□ 0.46
SHANK2-204ENST00000409530 A0A0G2JLL6 359 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms