RNA–Protein interactions for RNA: ENST00000409493.3

INO80B-202, Transcript of INO80 complex subunit B, humanhuman

TSL 5

Gene INO80B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80B-202ENST00000409493 KIAA1755Q5JYT7 1200 aa13.77□□□□□ -0.21
INO80B-202ENST00000409493 USP17L2Q6R6M4 530 aa13.77□□□□□ -0.21
INO80B-202ENST00000409493 NFXL1Q6ZNB6 911 aa13.77□□□□□ -0.21
INO80B-202ENST00000409493 NECAB1Q8N987 351 aa13.77□□□□□ -0.21
INO80B-202ENST00000409493 PNMA1Q8ND90 353 aa13.77□□□□□ -0.21
INO80B-202ENST00000409493 SMARCC2Q8TAQ2 1214 aa13.77□□□□□ -0.21
INO80B-202ENST00000409493 ANKS1AQ92625 1134 aa13.77□□□□□ -0.21
INO80B-202ENST00000409493 MKL1Q969V6 931 aa13.77□□□□□ -0.21
INO80B-202ENST00000409493 C12orf42Q96LP6 360 aa13.77□□□□□ -0.21
INO80B-202ENST00000409493 UNC93B1Q9H1C4 597 aa13.77□□□□□ -0.21
INO80B-202ENST00000409493 EMILIN3Q9NT22 766 aa13.77□□□□□ -0.21
INO80B-202ENST00000409493 NAP1L2Q9ULW6 460 aaPredicted RBP13.77□□□□□ -0.21
INO80B-202ENST00000409493 SYNPO2Q9UMS6 1093 aa13.77□□□□□ -0.21
INO80B-202ENST00000409493 NID2Q14112 1375 aa13.76□□□□□ -0.21
INO80B-202ENST00000409493 F5H6K3 240 aa13.76□□□□□ -0.21
INO80B-202ENST00000409493 F13A1P00488 732 aa13.76□□□□□ -0.21
INO80B-202ENST00000409493 CALM1P0DP23 149 aa13.76□□□□□ -0.21
INO80B-202ENST00000409493 CALM2P0DP24 149 aa13.76□□□□□ -0.21
INO80B-202ENST00000409493 CALM3P0DP25 149 aa13.76□□□□□ -0.21
INO80B-202ENST00000409493 VCAM1P19320 739 aa13.76□□□□□ -0.21
INO80B-202ENST00000409493 KLRC3Q07444 240 aa13.76□□□□□ -0.21
INO80B-202ENST00000409493 SCRN1Q12765 414 aa13.76□□□□□ -0.21
INO80B-202ENST00000409493 GMCL1P1Q8NEA9 526 aa13.76□□□□□ -0.21
INO80B-202ENST00000409493 WASF1Q92558 559 aa13.76□□□□□ -0.21
INO80B-202ENST00000409493 NUP88Q99567 741 aaPredicted RBP13.76□□□□□ -0.21
INO80B-202ENST00000409493 P2RX7Q99572 595 aaKnown RBP13.76□□□□□ -0.21
INO80B-202ENST00000409493 LARP6Q9BRS8 491 aaKnown RBP13.76□□□□□ -0.21
INO80B-202ENST00000409493 MYL10Q9BUA6 226 aa13.76□□□□□ -0.21
INO80B-202ENST00000409493 ZSCAN16Q9H4T2 348 aaPredicted RBP13.76□□□□□ -0.21
INO80B-202ENST00000409493 ISY1Q9ULR0 285 aaKnown RBP13.76□□□□□ -0.21
INO80B-202ENST00000409493 SLC12A7Q9Y666 1083 aa13.76□□□□□ -0.21
INO80B-202ENST00000409493 MYH6P13533 1939 aa13.76□□□□□ -0.21
INO80B-202ENST00000409493 TCHHQ07283 1943 aa13.76□□□□□ -0.21
INO80B-202ENST00000409493 H3BQV1 296 aa13.75□□□□□ -0.21
INO80B-202ENST00000409493 ZBTB43O43298 467 aa13.75□□□□□ -0.21
INO80B-202ENST00000409493 MBD3O95983 291 aa13.75□□□□□ -0.21
INO80B-202ENST00000409493 METAP2P50579 478 aaKnown RBP eCLIP13.75□□□□□ -0.21
INO80B-202ENST00000409493 CCDC96Q2M329 555 aa13.75□□□□□ -0.21
INO80B-202ENST00000409493 SLFN13Q68D06 897 aa13.75□□□□□ -0.21
INO80B-202ENST00000409493 UBE2Q1Q7Z7E8 422 aa13.75□□□□□ -0.21
INO80B-202ENST00000409493 RAB11FIP4Q86YS3 637 aa13.75□□□□□ -0.21
INO80B-202ENST00000409493 ZNF654Q8IZM8 581 aa13.75□□□□□ -0.21
INO80B-202ENST00000409493 U2AF1L4Q8WU68 220 aaKnown RBP13.75□□□□□ -0.21
INO80B-202ENST00000409493 GTF3C2Q8WUA4 911 aaPredicted RBP13.75□□□□□ -0.21
INO80B-202ENST00000409493 LPAR1Q92633 364 aa13.75□□□□□ -0.21
INO80B-202ENST00000409493 TXNRD2Q9NNW7 524 aa13.75□□□□□ -0.21
INO80B-202ENST00000409493 A0A0G2JMZ2 1700 aa13.75□□□□□ -0.21
INO80B-202ENST00000409493 FRMPD2Q68DX3 1309 aaPredicted RBP13.74□□□□□ -0.21
INO80B-202ENST00000409493 VPS37CA5D8V6 355 aaPredicted RBP13.74□□□□□ -0.21
INO80B-202ENST00000409493 WDR46O15213 610 aaKnown RBP13.74□□□□□ -0.21
INO80B-202ENST00000409493 TRAK2O60296 914 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 PEX10O60683 326 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 DDAH1O94760 285 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 PDHBP11177 359 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 RXRAP19793 462 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 FAM83BQ5T0W9 1011 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 ATL3Q6DD88 541 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 MCTP1Q6DN14 999 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 APOA5Q6Q788 366 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 CATIPQ7Z7H3 387 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 MICU3Q86XE3 530 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 GPRC5AQ8NFJ5 357 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 NUP133Q8WUM0 1156 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 TANGO6Q9C0B7 1094 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 RPAP3Q9H6T3 665 aaPredicted RBP13.74□□□□□ -0.21
INO80B-202ENST00000409493 PAK6Q9NQU5 681 aaPredicted RBP13.74□□□□□ -0.21
INO80B-202ENST00000409493 RBPJLQ9UBG7 517 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 GJD2Q9UKL4 321 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 BRPF3Q9ULD4 1205 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 ZDHHC9Q9Y397 364 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 RLFQ13129 1914 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 ALPK3Q96L96 1907 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 PARP14Q460N5 1801 aa13.74□□□□□ -0.21
INO80B-202ENST00000409493 TRIOBPQ9H2D6 2365 aa13.73□□□□□ -0.21
INO80B-202ENST00000409493 PTPDC1A2A3K4 754 aa13.73□□□□□ -0.21
INO80B-202ENST00000409493 SGPL1O95470 568 aa13.73□□□□□ -0.21
INO80B-202ENST00000409493 HMGCRP04035 888 aa13.73□□□□□ -0.21
INO80B-202ENST00000409493 SLC1A4P43007 532 aa13.73□□□□□ -0.21
INO80B-202ENST00000409493 ST3GAL1Q11201 340 aa13.73□□□□□ -0.21
INO80B-202ENST00000409493 POTEEQ6S8J3 1075 aa13.73□□□□□ -0.21
INO80B-202ENST00000409493 CCDC144CPQ8IYA2 1237 aa13.73□□□□□ -0.21
INO80B-202ENST00000409493 NSUN7Q8NE18 718 aaKnown RBP13.73□□□□□ -0.21
INO80B-202ENST00000409493 DCAF4Q8WV16 495 aa13.73□□□□□ -0.21
INO80B-202ENST00000409493 GMCL1Q96IK5 515 aa13.73□□□□□ -0.21
INO80B-202ENST00000409493 MTMR6Q9Y217 621 aa13.73□□□□□ -0.21
INO80B-202ENST00000409493 STK36Q9NRP7 1315 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 GOLGA8AA7E2F4 631 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 USP17L15C9J2P7 530 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 USP17L13C9JLJ4 530 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 USP17L11C9JVI0 530 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 USP17L18D6R9N7 530 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 USP17L22D6RA61 530 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 USP17L17D6RBQ6 530 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 USP17L19D6RCP7 530 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 USP17L20D6RJB6 530 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 FARP2O94887 1054 aaPredicted RBP13.72□□□□□ -0.21
INO80B-202ENST00000409493 SNHG28P0DPA3 235 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 BMP3P12645 472 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 CAPN2P17655 700 aa13.72□□□□□ -0.21
INO80B-202ENST00000409493 MAPK4P31152 587 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms