RNA–Protein interactions for RNA: ENST00000409159.2

RAB1C-201, Transcript of RAB1C, member RAS oncogene family pseudogene, humanhuman

BASIC

Gene RAB1C, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1C-201ENST00000409159 LINC00301Q8NCQ3 95 aa12.86□□□□□ -0.35
RAB1C-201ENST00000409159 PROCA1Q8NCQ7 364 aaPredicted RBP12.86□□□□□ -0.35
RAB1C-201ENST00000409159 GPKOWQ92917 476 aaPredicted RBP eCLIP12.86□□□□□ -0.35
RAB1C-201ENST00000409159 CUL5Q93034 780 aa12.86□□□□□ -0.35
RAB1C-201ENST00000409159 NUP88Q99567 741 aaPredicted RBP12.86□□□□□ -0.35
RAB1C-201ENST00000409159 CPVLQ9H3G5 476 aa12.86□□□□□ -0.35
RAB1C-201ENST00000409159 PPP1R9AQ9ULJ8 1098 aa12.86□□□□□ -0.35
RAB1C-201ENST00000409159 ISY1Q9ULR0 285 aaKnown RBP12.86□□□□□ -0.35
RAB1C-201ENST00000409159 PCDHA1Q9Y5I3 950 aa12.86□□□□□ -0.35
RAB1C-201ENST00000409159 TRIM75PA6NK02 468 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 USP17L15C9J2P7 530 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 USP17L13C9JLJ4 530 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 USP17L11C9JVI0 530 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 USP17L18D6R9N7 530 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 USP17L22D6RA61 530 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 USP17L17D6RBQ6 530 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 USP17L19D6RCP7 530 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 USP17L20D6RJB6 530 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 TRAK2O60296 914 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 FOSP01100 380 aaPredicted RBP12.85□□□□□ -0.35
RAB1C-201ENST00000409159 USP17L24Q0WX57 530 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 NR5A1Q13285 461 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 AP3B2Q13367 1082 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 FAM173BQ6P4H8 233 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 REXO1Q8N1G1 1221 aaKnown RBP12.85□□□□□ -0.35
RAB1C-201ENST00000409159 OXER1Q8TDS5 423 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 PIBF1Q8WXW3 757 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 USP28Q96RU2 1077 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 NAP1L4Q99733 375 aaKnown RBP12.85□□□□□ -0.35
RAB1C-201ENST00000409159 PSTPIP2Q9H939 334 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 HOXC10Q9NYD6 342 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 MAP3K20Q9NYL2 800 aaKnown RBP12.85□□□□□ -0.35
RAB1C-201ENST00000409159 TFIP11Q9UBB9 837 aaKnown RBP12.85□□□□□ -0.35
RAB1C-201ENST00000409159 PCDHA6Q9UN73 950 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 ADAMTS5Q9UNA0 930 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 MRPL11Q9Y3B7 192 aaKnown RBP12.85□□□□□ -0.35
RAB1C-201ENST00000409159 PCDHA8Q9Y5H6 950 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 ABCB11O95342 1321 aa12.85□□□□□ -0.35
RAB1C-201ENST00000409159 A0A0G2JLL6 359 aaPredicted RBP12.84□□□□□ -0.35
RAB1C-201ENST00000409159 CCDC194A0A1B0GVG4 234 aa12.84□□□□□ -0.35
RAB1C-201ENST00000409159 A0A1W2PQ27 194 aa12.84□□□□□ -0.35
RAB1C-201ENST00000409159 A0A1W2PQ64 194 aa12.84□□□□□ -0.35
RAB1C-201ENST00000409159 A0A1W2PQD8 194 aa12.84□□□□□ -0.35
RAB1C-201ENST00000409159 GOLGA6L4A6NEF3 574 aa12.84□□□□□ -0.35
RAB1C-201ENST00000409159 PIK3CDO00329 1044 aa12.84□□□□□ -0.35
RAB1C-201ENST00000409159 ATP2A1O14983 1001 aa12.84□□□□□ -0.35
RAB1C-201ENST00000409159 FIBPO43427 364 aa12.84□□□□□ -0.35
RAB1C-201ENST00000409159 PPP1R11O60927 126 aaPredicted RBP12.84□□□□□ -0.35
RAB1C-201ENST00000409159 ZBED4O75132 1171 aa12.84□□□□□ -0.35
RAB1C-201ENST00000409159 ICAM1P05362 532 aa12.84□□□□□ -0.35
RAB1C-201ENST00000409159 HOXA7P31268 230 aaPredicted RBP12.84□□□□□ -0.35
RAB1C-201ENST00000409159 CLK2P49760 499 aaKnown RBP12.84□□□□□ -0.35
RAB1C-201ENST00000409159 GHRHRQ02643 423 aa12.84□□□□□ -0.35
RAB1C-201ENST00000409159 TTLL12Q14166 644 aaPredicted RBP12.84□□□□□ -0.35
RAB1C-201ENST00000409159 COG2Q14746 738 aa12.84□□□□□ -0.35
RAB1C-201ENST00000409159 NONOQ15233 471 aaKnown RBP eCLIP12.84□□□□□ -0.35
RAB1C-201ENST00000409159 MAP1SQ66K74 1059 aaPredicted RBP12.84□□□□□ -0.35
RAB1C-201ENST00000409159 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
RAB1C-201ENST00000409159 CATSPERGQ6ZRH7 1159 aa12.84□□□□□ -0.35
RAB1C-201ENST00000409159 FASTKD5Q7L8L6 764 aaKnown RBP12.84□□□□□ -0.35
RAB1C-201ENST00000409159 PRRT2Q7Z6L0 340 aaPredicted RBP12.84□□□□□ -0.35
RAB1C-201ENST00000409159 RPAP3Q9H6T3 665 aaPredicted RBP12.84□□□□□ -0.35
RAB1C-201ENST00000409159 SLC38A10Q9HBR0 1119 aa12.84□□□□□ -0.35
RAB1C-201ENST00000409159 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.84□□□□□ -0.35
RAB1C-201ENST00000409159 DOCK1Q14185 1865 aa12.83□□□□□ -0.36
RAB1C-201ENST00000409159 LAD1O00515 517 aa12.83□□□□□ -0.36
RAB1C-201ENST00000409159 SPTLC2O15270 562 aa12.83□□□□□ -0.36
RAB1C-201ENST00000409159 TOB1P50616 345 aaPredicted RBP12.83□□□□□ -0.36
RAB1C-201ENST00000409159 PABPC4Q13310 644 aaKnown RBP eCLIP12.83□□□□□ -0.36
RAB1C-201ENST00000409159 STK38Q15208 465 aa12.83□□□□□ -0.36
RAB1C-201ENST00000409159 PTPAQ15257 358 aa12.83□□□□□ -0.36
RAB1C-201ENST00000409159 SF3A1Q15459 793 aaKnown RBP12.83□□□□□ -0.36
RAB1C-201ENST00000409159 ZYXQ15942 572 aaKnown RBP12.83□□□□□ -0.36
RAB1C-201ENST00000409159 FOXD4L6Q3SYB3 417 aaPredicted RBP12.83□□□□□ -0.36
RAB1C-201ENST00000409159 ADALQ6DHV7 355 aa12.83□□□□□ -0.36
RAB1C-201ENST00000409159 FOXD4L3Q6VB84 417 aaPredicted RBP12.83□□□□□ -0.36
RAB1C-201ENST00000409159 CCDC84Q86UT8 332 aaPredicted RBP12.83□□□□□ -0.36
RAB1C-201ENST00000409159 MB21D1Q8N884 522 aa12.83□□□□□ -0.36
RAB1C-201ENST00000409159 C2orf69Q8N8R5 385 aa12.83□□□□□ -0.36
RAB1C-201ENST00000409159 KIFC2Q96AC6 838 aa12.83□□□□□ -0.36
RAB1C-201ENST00000409159 COA7Q96BR5 231 aa12.83□□□□□ -0.36
RAB1C-201ENST00000409159 DDX49Q9Y6V7 483 aaKnown RBP12.83□□□□□ -0.36
RAB1C-201ENST00000409159 FLOT1O75955 427 aa12.82□□□□□ -0.36
RAB1C-201ENST00000409159 DSG3P32926 999 aa12.82□□□□□ -0.36
RAB1C-201ENST00000409159 HMGCS2P54868 508 aa12.82□□□□□ -0.36
RAB1C-201ENST00000409159 PRKG1Q13976 671 aa12.82□□□□□ -0.36
RAB1C-201ENST00000409159 TKFCQ3LXA3 575 aa12.82□□□□□ -0.36
RAB1C-201ENST00000409159 TTC38Q5R3I4 469 aa12.82□□□□□ -0.36
RAB1C-201ENST00000409159 MOXD1Q6UVY6 613 aa12.82□□□□□ -0.36
RAB1C-201ENST00000409159 LBX2Q6XYB7 198 aa12.82□□□□□ -0.36
RAB1C-201ENST00000409159 PIK3AP1Q6ZUJ8 805 aa12.82□□□□□ -0.36
RAB1C-201ENST00000409159 MCF2L2Q86YR7 1114 aa12.82□□□□□ -0.36
RAB1C-201ENST00000409159 ZNF579Q8NAF0 562 aaKnown RBP12.82□□□□□ -0.36
RAB1C-201ENST00000409159 SYAP1Q96A49 352 aaPredicted RBP12.82□□□□□ -0.36
RAB1C-201ENST00000409159 FERMT2Q96AC1 680 aa12.82□□□□□ -0.36
RAB1C-201ENST00000409159 SLC10A4Q96EP9 437 aa12.82□□□□□ -0.36
RAB1C-201ENST00000409159 TANGO6Q9C0B7 1094 aa12.82□□□□□ -0.36
RAB1C-201ENST00000409159 GBA2Q9HCG7 927 aaPredicted RBP12.82□□□□□ -0.36
RAB1C-201ENST00000409159 RABGAP1Q9Y3P9 1069 aa12.82□□□□□ -0.36
RAB1C-201ENST00000409159 CLIC4Q9Y696 253 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms