RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TXNRD3Q86VQ6 643 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 OR8K1Q8NGG5 319 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 KIFC2Q96AC6 838 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 PPANQ9NQ55 473 aaKnown RBP9.3□□□□□ -0.92
SNX13-201ENST00000409076 GOLGA6AQ9NYA3 693 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 AKAP12Q02952 1782 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 FAM205AQ6ZU69 1335 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 FRMD3A2A2Y4 597 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 EIF4E1BA6NMX2 242 aaKnown RBP9.3□□□□□ -0.92
SNX13-201ENST00000409076 KRT86O43790 486 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 PLCG1P19174 1290 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 ADCY1Q08828 1119 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 TCP11X2Q5H9J9 407 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 CABP7Q86V35 215 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 RDH13Q8NBN7 331 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 CTAGE1Q96RT6 745 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 CRNKL1Q9BZJ0 848 aaKnown RBP9.3□□□□□ -0.92
SNX13-201ENST00000409076 GPR108Q9NPR9 543 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 ADD3Q9UEY8 706 aaKnown RBP9.3□□□□□ -0.92
SNX13-201ENST00000409076 BCAS4Q8TDM0 211 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 SHISA4Q96DD7 197 aa9.3□□□□□ -0.92
SNX13-201ENST00000409076 IFIH1Q9BYX4 1025 aaKnown RBP9.3□□□□□ -0.92
SNX13-201ENST00000409076 SEC63Q9UGP8 760 aaKnown RBP9.3□□□□□ -0.92
SNX13-201ENST00000409076 GOLGA6BA6NDN3 693 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 PPP1R3GB7ZBB8 358 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 MEIS1O00470 390 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 BUB1BO60566 1050 aaPredicted RBP9.29□□□□□ -0.92
SNX13-201ENST00000409076 ACTN2P35609 894 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 CYLC1P35663 651 aaPredicted RBP9.29□□□□□ -0.92
SNX13-201ENST00000409076 MECOMQ03112 1051 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 GFPT1Q06210 699 aaPredicted RBP9.29□□□□□ -0.92
SNX13-201ENST00000409076 NBPF9Q3BBW0 867 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 TMTC1Q8IUR5 882 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 BLIDQ8IZY5 108 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 GLIS3Q8NEA6 775 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 FOXP1Q9H334 677 aaPredicted RBP9.29□□□□□ -0.92
SNX13-201ENST00000409076 RCCD1A6NED2 376 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 CHMP2AO43633 222 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 MAGEA1P43355 309 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 EHHADHQ08426 723 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 TCP10Q12799 353 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 TTC31Q49AM3 519 aaPredicted RBP9.29□□□□□ -0.92
SNX13-201ENST00000409076 COG1Q8WTW3 980 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 SECISBP2LQ93073 1101 aaKnown RBP9.29□□□□□ -0.92
SNX13-201ENST00000409076 CHORDC1Q9UHD1 332 aaPredicted RBP9.29□□□□□ -0.92
SNX13-201ENST00000409076 TTF2Q9UNY4 1162 aaKnown RBP9.29□□□□□ -0.92
SNX13-201ENST00000409076 WDR17Q8IZU2 1322 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 LTN1O94822 1766 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 ZRANB2O95218 330 aaKnown RBP eCLIP9.29□□□□□ -0.92
SNX13-201ENST00000409076 PAFAH1B1P43034 410 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 CACNB3P54284 484 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 UBXN2AP68543 259 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 GUCY2DQ02846 1103 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 STK4Q13043 487 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 BRINP3Q76B58 766 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 LRRC1Q9BTT6 524 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 NHEJ1Q9H9Q4 299 aaPredicted RBP9.29□□□□□ -0.92
SNX13-201ENST00000409076 FMN2Q9NZ56 1722 aa9.29□□□□□ -0.92
SNX13-201ENST00000409076 NPHP3-ACAD11A0A0J9YXS1 232 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 A0A1B0GTH6 734 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 ERVV-2B6SEH9 535 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 EIF4A3P38919 411 aaKnown RBP9.28□□□□□ -0.92
SNX13-201ENST00000409076 CYP4A11Q02928 519 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 DDB1Q16531 1140 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 FBXW10Q5XX13 1052 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 OR2W6PQ8NHA6 318 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 FAM76AQ8TAV0 307 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 DPH5Q9H2P9 285 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 CCDC151A5D8V7 595 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 SMCO2A6NFE2 343 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 SCNN1DP51172 638 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 TXNRD1Q16881 649 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 BPIFA3Q9BQP9 254 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 AP1M1Q9BXS5 423 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 SFI1A8K8P3 1242 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 NDUFAB1O14561 156 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 GNPATO15228 680 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 USO1O60763 962 aaKnown RBP9.28□□□□□ -0.92
SNX13-201ENST00000409076 KRT14P02533 472 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 LIFRP42702 1097 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 FAM98CQ17RN3 349 aaKnown RBP9.28□□□□□ -0.92
SNX13-201ENST00000409076 USH1GQ495M9 461 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 AEBP2Q6ZN18 517 aaPredicted RBP9.28□□□□□ -0.92
SNX13-201ENST00000409076 FNBP4Q8N3X1 1017 aaPredicted RBP9.28□□□□□ -0.92
SNX13-201ENST00000409076 PIGSQ96S52 555 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 KRT12Q99456 494 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 SLAIN2Q9P270 581 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 DMGDHQ9UI17 866 aaKnown RBP9.28□□□□□ -0.92
SNX13-201ENST00000409076 ZNF335Q9H4Z2 1342 aaPredicted RBP9.28□□□□□ -0.92
SNX13-201ENST00000409076 RTL9Q8NET4 1388 aa9.28□□□□□ -0.92
SNX13-201ENST00000409076 CALM1P0DP23 149 aa9.27□□□□□ -0.92
SNX13-201ENST00000409076 CALM2P0DP24 149 aa9.27□□□□□ -0.92
SNX13-201ENST00000409076 CALM3P0DP25 149 aa9.27□□□□□ -0.92
SNX13-201ENST00000409076 CYP19A1P11511 503 aaPredicted RBP9.27□□□□□ -0.92
SNX13-201ENST00000409076 ABCB4P21439 1286 aa9.27□□□□□ -0.92
SNX13-201ENST00000409076 HIBADHP31937 336 aaKnown RBP9.27□□□□□ -0.92
SNX13-201ENST00000409076 POLR2FP61218 127 aaKnown RBP9.27□□□□□ -0.92
SNX13-201ENST00000409076 ZYXQ15942 572 aaKnown RBP9.27□□□□□ -0.92
SNX13-201ENST00000409076 PKN1Q16512 942 aa9.27□□□□□ -0.92
SNX13-201ENST00000409076 BEND6Q5SZJ8 279 aaPredicted RBP9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms