RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 CXXC1Q9P0U4 656 aaPredicted RBP15.7■□□□□ 0.1
TUBA3D-202ENST00000409047 ARPP21Q9UBL0 812 aaPredicted RBP15.7■□□□□ 0.1
TUBA3D-202ENST00000409047 MROH7Q68CQ1 1323 aa15.69■□□□□ 0.1
TUBA3D-202ENST00000409047 A0A0U1RQG5 324 aaPredicted RBP15.69■□□□□ 0.1
TUBA3D-202ENST00000409047 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.69■□□□□ 0.1
TUBA3D-202ENST00000409047 PTGS1P23219 599 aa15.69■□□□□ 0.1
TUBA3D-202ENST00000409047 HNRNPUQ00839 825 aaKnown RBP eCLIP15.69■□□□□ 0.1
TUBA3D-202ENST00000409047 AKNAD1Q5T1N1 836 aa15.69■□□□□ 0.1
TUBA3D-202ENST00000409047 AMOTL1Q8IY63 956 aa15.69■□□□□ 0.1
TUBA3D-202ENST00000409047 CPXCR1Q8N123 301 aa15.69■□□□□ 0.1
TUBA3D-202ENST00000409047 PCSK9Q8NBP7 692 aaKnown RBP15.69■□□□□ 0.1
TUBA3D-202ENST00000409047 MKL1Q969V6 931 aa15.69■□□□□ 0.1
TUBA3D-202ENST00000409047 PPP1R12CQ9BZL4 782 aa15.69■□□□□ 0.1
TUBA3D-202ENST00000409047 EPB41L4AQ9HCS5 686 aaPredicted RBP15.69■□□□□ 0.1
TUBA3D-202ENST00000409047 GRIN2DO15399 1336 aa15.68■□□□□ 0.1
TUBA3D-202ENST00000409047 UMODL1Q5DID0 1318 aa15.68■□□□□ 0.1
TUBA3D-202ENST00000409047 BDP1A6H8Y1 2624 aa15.68■□□□□ 0.1
TUBA3D-202ENST00000409047 CYP2C18P33260 490 aa15.68■□□□□ 0.1
TUBA3D-202ENST00000409047 CNTN2Q02246 1040 aa15.68■□□□□ 0.1
TUBA3D-202ENST00000409047 GNASQ5JWF2 1037 aa15.68■□□□□ 0.1
TUBA3D-202ENST00000409047 CCDC144CPQ8IYA2 1237 aa15.68■□□□□ 0.1
TUBA3D-202ENST00000409047 STK11IPQ8N1F8 1099 aa15.68■□□□□ 0.1
TUBA3D-202ENST00000409047 FAM133AQ8N9E0 248 aa15.68■□□□□ 0.1
TUBA3D-202ENST00000409047 HERVK_113Q902F9 699 aa15.68■□□□□ 0.1
TUBA3D-202ENST00000409047 OSBP2Q969R2 916 aa15.68■□□□□ 0.1
TUBA3D-202ENST00000409047 CLIP2Q9UDT6 1046 aa15.68■□□□□ 0.1
TUBA3D-202ENST00000409047 RAPGEFL1Q9UHV5 662 aa15.68■□□□□ 0.1
TUBA3D-202ENST00000409047 GNEQ9Y223 722 aaKnown RBP15.68■□□□□ 0.1
TUBA3D-202ENST00000409047 YBX2Q9Y2T7 364 aaKnown RBP15.68■□□□□ 0.1
TUBA3D-202ENST00000409047 HMMRO75330 724 aa15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 COL9A1P20849 921 aa15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 BEX3Q00994 111 aa15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 GIMAP6Q6P9H5 292 aa15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 TMEM199Q8N511 208 aa15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 CHST13Q8NET6 341 aa15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 ATXN2LQ8WWM7 1075 aaKnown RBP15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 KIFC2Q96AC6 838 aa15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 CEP95Q96GE4 821 aa15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 DDRGK1Q96HY6 314 aa15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 ASB2Q96Q27 587 aa15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 IL23AQ9NPF7 189 aa15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 MTMR4Q9NYA4 1195 aa15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 COG6Q9Y2V7 657 aa15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 DDX49Q9Y6V7 483 aaKnown RBP15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 TCF20Q9UGU0 1960 aaKnown RBP15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 ZNF536O15090 1300 aa15.67■□□□□ 0.1
TUBA3D-202ENST00000409047 SOWAHBA6NEL2 793 aa15.66■□□□□ 0.1
TUBA3D-202ENST00000409047 SMARCA5O60264 1052 aaPredicted RBP15.66■□□□□ 0.1
TUBA3D-202ENST00000409047 ZBED4O75132 1171 aa15.66■□□□□ 0.1
TUBA3D-202ENST00000409047 SLC4A3P48751 1232 aa15.66■□□□□ 0.1
TUBA3D-202ENST00000409047 OAZ1P54368 228 aa15.66■□□□□ 0.1
TUBA3D-202ENST00000409047 PSRC1Q6PGN9 363 aaPredicted RBP15.66■□□□□ 0.1
TUBA3D-202ENST00000409047 CCDC129Q6ZRS4 1044 aa15.66■□□□□ 0.1
TUBA3D-202ENST00000409047 ANKRD35Q8N283 1001 aa15.66■□□□□ 0.1
TUBA3D-202ENST00000409047 PPM1EQ8WY54 764 aa15.66■□□□□ 0.1
TUBA3D-202ENST00000409047 GAS2L1Q99501 681 aaPredicted RBP15.66■□□□□ 0.1
TUBA3D-202ENST00000409047 PLIN4Q96Q06 1357 aa15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 MINDY4BA8MYZ0 360 aa15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 PRDM1O75626 825 aa15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 TMEM63BQ5T3F8 832 aa15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 CXCL17Q6UXB2 119 aa15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 LRRC47Q8N1G4 583 aaKnown RBP15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 GMCL1P1Q8NEA9 526 aa15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 WNT8AQ9H1J5 351 aa15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 NKX2-4Q9H2Z4 354 aa15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 MKNK2Q9HBH9 465 aa15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 A1CFQ9NQ94 594 aaKnown RBP15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 THEGQ9P2T0 379 aa15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 FBXO40Q9UH90 709 aa15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 FEM1BQ9UK73 627 aa15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 DDX19BQ9UMR2 479 aa15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 SYNPO2Q9UMS6 1093 aa15.65■□□□□ 0.1
TUBA3D-202ENST00000409047 SCN5AQ14524 2016 aa15.64■□□□□ 0.09
TUBA3D-202ENST00000409047 ZSCAN25Q6NSZ9 544 aa15.64■□□□□ 0.09
TUBA3D-202ENST00000409047 CCDC174Q6PII3 467 aa15.64■□□□□ 0.09
TUBA3D-202ENST00000409047 KBTBD3Q8NAB2 608 aa15.64■□□□□ 0.09
TUBA3D-202ENST00000409047 ADAMTS19Q8TE59 1207 aa15.64■□□□□ 0.09
TUBA3D-202ENST00000409047 VTI1AQ96AJ9 217 aa15.64■□□□□ 0.09
TUBA3D-202ENST00000409047 SPC25Q9HBM1 224 aa15.64■□□□□ 0.09
TUBA3D-202ENST00000409047 HOMER2Q9NSB8 354 aa15.64■□□□□ 0.09
TUBA3D-202ENST00000409047 PRRC2BQ5JSZ5 2229 aaKnown RBP15.63■□□□□ 0.09
TUBA3D-202ENST00000409047 M0R2C6 588 aa15.63■□□□□ 0.09
TUBA3D-202ENST00000409047 TLR3O15455 904 aaKnown RBP15.63■□□□□ 0.09
TUBA3D-202ENST00000409047 GPAA1O43292 621 aa15.63■□□□□ 0.09
TUBA3D-202ENST00000409047 B4GALT4O60513 344 aa15.63■□□□□ 0.09
TUBA3D-202ENST00000409047 SMPD1P17405 629 aa15.63■□□□□ 0.09
TUBA3D-202ENST00000409047 TNFAIP2Q03169 654 aa15.63■□□□□ 0.09
TUBA3D-202ENST00000409047 RAB30Q15771 203 aa15.63■□□□□ 0.09
TUBA3D-202ENST00000409047 CCDC85BQ15834 202 aaPredicted RBP15.63■□□□□ 0.09
TUBA3D-202ENST00000409047 TAPT1Q6NXT6 567 aa15.63■□□□□ 0.09
TUBA3D-202ENST00000409047 APPBP2Q92624 585 aa15.63■□□□□ 0.09
TUBA3D-202ENST00000409047 AGBL1Q96MI9 1066 aa15.63■□□□□ 0.09
TUBA3D-202ENST00000409047 NOC4LQ9BVI4 516 aaKnown RBP15.63■□□□□ 0.09
TUBA3D-202ENST00000409047 HIPK3Q9H422 1215 aa15.63■□□□□ 0.09
TUBA3D-202ENST00000409047 PDGFCQ9NRA1 345 aa15.63■□□□□ 0.09
TUBA3D-202ENST00000409047 TTLL1O95922 423 aa15.62■□□□□ 0.09
TUBA3D-202ENST00000409047 FGBP02675 491 aa15.62■□□□□ 0.09
TUBA3D-202ENST00000409047 MYOGP15173 224 aa15.62■□□□□ 0.09
TUBA3D-202ENST00000409047 RABGGTBP53611 331 aa15.62■□□□□ 0.09
TUBA3D-202ENST00000409047 ITGA7Q13683 1181 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms