RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 RAD51AP2Q09MP3 1159 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 TRIM14Q14142 442 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 KIAA0753Q2KHM9 967 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 ZNF569Q5MCW4 686 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 ARHGEF16Q5VV41 709 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 MTHFD1LQ6UB35 978 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 APBB1IPQ7Z5R6 666 aaPredicted RBP4.22□□□□□ -1.73
RGPD4-201ENST00000408999 CNGA4Q8IV77 575 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 MYCT1Q8N699 235 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 IGSF22Q8N9C0 903 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 PNMA1Q8ND90 353 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 IFT74Q96LB3 600 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 VPS16Q9H269 839 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 SWAP70Q9UH65 585 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 CLRN2A0PK11 232 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 H7C1W4 665 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 KRT86O43790 486 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 SCG2P13521 617 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 ZNF75DP51815 510 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 IRX3P78415 501 aaPredicted RBP4.22□□□□□ -1.73
RGPD4-201ENST00000408999 FANCCQ00597 558 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 MAP2K1Q02750 393 aaPredicted RBP4.22□□□□□ -1.73
RGPD4-201ENST00000408999 CYP4A11Q02928 519 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 KIF5AQ12840 1032 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 SMC1AQ14683 1233 aaKnown RBP4.22□□□□□ -1.73
RGPD4-201ENST00000408999 ASIC2Q16515 512 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 NSMFQ6X4W1 530 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 TMC4Q7Z404 712 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 CSGALNACT2Q8N6G5 542 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 CEP112Q8N8E3 955 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 PI4K2BQ8TCG2 481 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 PSTPIP2Q9H939 334 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 BSDC1Q9NW68 430 aaPredicted RBP4.22□□□□□ -1.73
RGPD4-201ENST00000408999 DDX25Q9UHL0 483 aaKnown RBP4.22□□□□□ -1.73
RGPD4-201ENST00000408999 DNM3Q9UQ16 869 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 LUC7L2Q9Y383 392 aaKnown RBP4.22□□□□□ -1.73
RGPD4-201ENST00000408999 KDM3AQ9Y4C1 1321 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 CARMIL3Q8ND23 1372 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 SPATA31D1Q6ZQQ2 1576 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 VWDEQ8N2E2 1590 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 GOLGA6L7A0A1B0GV03 622 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 GCNT3O95395 438 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 POLR2MP0CAP2 368 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 TECP42680 631 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 BMS1Q14692 1282 aaKnown RBP4.22□□□□□ -1.73
RGPD4-201ENST00000408999 ABCB5Q2M3G0 1257 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 PRR16Q569H4 304 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 WDR44Q5JSH3 913 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 MYSM1Q5VVJ2 828 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 FBXO38Q6PIJ6 1188 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 CYP26C1Q6V0L0 522 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 GADL1Q6ZQY3 521 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 PALB2Q86YC2 1186 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 FNBP1Q96RU3 617 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 MRPL44Q9H9J2 332 aaKnown RBP4.22□□□□□ -1.73
RGPD4-201ENST00000408999 CLIC4Q9Y696 253 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 ADAMTS13Q76LX8 1427 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 SASH1O94885 1247 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 PCP11498 1178 aaKnown RBP4.22□□□□□ -1.73
RGPD4-201ENST00000408999 MECOMQ03112 1051 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 BIRC3Q13489 604 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 INF2Q27J81 1249 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 TBC1D9BQ66K14 1250 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 SYT10Q6XYQ8 523 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 MIER3Q7Z3K6 550 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 ZNF354CQ86Y25 554 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 NELFCDQ8IXH7 590 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 RASEFQ8IZ41 740 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 MYRIPQ8NFW9 859 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 DCPSQ96C86 337 aaKnown RBP4.22□□□□□ -1.73
RGPD4-201ENST00000408999 FERMT1Q9BQL6 677 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 TSPYL2Q9H2G4 693 aaPredicted RBP4.22□□□□□ -1.73
RGPD4-201ENST00000408999 AZI2Q9H6S1 392 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 ATP8A2Q9NTI2 1148 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 TAB2Q9NYJ8 693 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 MTMR6Q9Y217 621 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 CSADQ9Y600 493 aa4.22□□□□□ -1.73
RGPD4-201ENST00000408999 MYO10Q9HD67 2058 aa4.21□□□□□ -1.73
RGPD4-201ENST00000408999 TMEM131LA2VDJ0 1609 aa4.21□□□□□ -1.73
RGPD4-201ENST00000408999 KLRF2D3W0D1 207 aa4.21□□□□□ -1.74
RGPD4-201ENST00000408999 EZRP15311 586 aaKnown RBP4.21□□□□□ -1.74
RGPD4-201ENST00000408999 NPR1P16066 1061 aa4.21□□□□□ -1.74
RGPD4-201ENST00000408999 H2AFXP16104 143 aaPredicted RBP4.21□□□□□ -1.74
RGPD4-201ENST00000408999 GSTA5Q7RTV2 222 aa4.21□□□□□ -1.74
RGPD4-201ENST00000408999 NLRX1Q86UT6 975 aa4.21□□□□□ -1.74
RGPD4-201ENST00000408999 TPH2Q8IWU9 490 aa4.21□□□□□ -1.74
RGPD4-201ENST00000408999 TRMT44Q8IYL2 757 aaKnown RBP4.21□□□□□ -1.74
RGPD4-201ENST00000408999 MLKLQ8NB16 471 aa4.21□□□□□ -1.74
RGPD4-201ENST00000408999 CHURC1Q8WUH1 139 aa4.21□□□□□ -1.74
RGPD4-201ENST00000408999 GOLGA1Q92805 767 aa4.21□□□□□ -1.74
RGPD4-201ENST00000408999 TRERF1Q96PN7 1200 aa4.21□□□□□ -1.74
RGPD4-201ENST00000408999 PAGR1Q9BTK6 254 aa4.21□□□□□ -1.74
RGPD4-201ENST00000408999 PLVAPQ9BX97 442 aa4.21□□□□□ -1.74
RGPD4-201ENST00000408999 IVNS1ABPQ9Y6Y0 642 aa4.21□□□□□ -1.74
RGPD4-201ENST00000408999 GLI3P10071 1580 aa4.21□□□□□ -1.74
RGPD4-201ENST00000408999 TMEM232C9JQI7 657 aa4.21□□□□□ -1.74
RGPD4-201ENST00000408999 SH2B2O14492 632 aaPredicted RBP4.21□□□□□ -1.74
RGPD4-201ENST00000408999 DKC1O60832 514 aaKnown RBP eCLIP4.21□□□□□ -1.74
RGPD4-201ENST00000408999 GAS7O60861 476 aa4.21□□□□□ -1.74
RGPD4-201ENST00000408999 CYP19A1P11511 503 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms