RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 USP25Q9UHP3 1055 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 PCDHA6Q9UN73 950 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 PCDHA8Q9Y5H6 950 aa11.78□□□□□ -0.52
SNORD88C-201ENST00000408061 SCN4AP35499 1836 aa11.77□□□□□ -0.52
SNORD88C-201ENST00000408061 IQCA1LA6NCM1 817 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 TMEM232C9JQI7 657 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 DDNO94850 711 aaPredicted RBP11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 VEGFAP15692 232 aaPredicted RBP11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 JAG1P78504 1218 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 ATP2C1P98194 919 aaPredicted RBP11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 SNW1Q13573 536 aaKnown RBP11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 GPR162Q16538 588 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 NBPF12Q5TAG4 269 aaPredicted RBP11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 TTBK2Q6IQ55 1244 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 PIK3AP1Q6ZUJ8 805 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 FBXO11Q86XK2 927 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 SULF1Q8IWU6 871 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 SCYL3Q8IZE3 742 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 TRPM4Q8TD43 1214 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 PIBF1Q8WXW3 757 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 FTOQ9C0B1 505 aaKnown RBP eCLIP11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 TSPY26PQ9H489 355 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 PSTPIP2Q9H939 334 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 PICK1Q9NRD5 415 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 GGA3Q9NZ52 723 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 HPSEQ9Y251 543 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 PCDHB6Q9Y5E3 794 aa11.77□□□□□ -0.53
SNORD88C-201ENST00000408061 DOCK1Q14185 1865 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 SYCE3A1L190 88 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 GLTPD2A6NH11 291 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 UNCXA6NJT0 531 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 USP17L10C9JJH3 530 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 PPP1R12BO60237 982 aaPredicted RBP11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 NR1I2O75469 434 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 CCDC192P0DO97 292 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 SLURP2P0DP57 97 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 GCFC2P16383 781 aaKnown RBP11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 NF2P35240 595 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 HIRAP54198 1017 aaPredicted RBP11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 IKQ13123 557 aaPredicted RBP11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 AP3B2Q13367 1082 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 CDC37Q16543 378 aaPredicted RBP11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 QRICH1Q2TAL8 776 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 UVSSAQ2YD98 709 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 TYW1BQ6NUM6 668 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 NEK8Q86SG6 692 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 PNMA8AQ86V59 439 aaPredicted RBP11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 PRPF38AQ8NAV1 312 aaKnown RBP11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 RBM46Q8TBY0 533 aaKnown RBP11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 ACER1Q8TDN7 264 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 MAP3K20Q9NYL2 800 aaKnown RBP11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 FBXO2Q9UK22 296 aaPredicted RBP11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 PRR12Q9ULL5 1215 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 PCDHA1Q9Y5I3 950 aa11.76□□□□□ -0.53
SNORD88C-201ENST00000408061 RAD21O60216 631 aa11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 ZNF202O95125 648 aa11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 MARCKSP29966 332 aaPredicted RBP11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 DEKP35659 375 aaKnown RBP11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 SLC16A2P36021 539 aa11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 LONP1P36776 959 aaKnown RBP11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 SYKP43405 635 aa11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 CLK2P49760 499 aaKnown RBP11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 USP11P51784 963 aa11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 PTGDRQ13258 359 aa11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 PPP4R3AQ6IN85 833 aa11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 MOXD1Q6UVY6 613 aa11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 ANP32BQ92688 251 aaKnown RBP11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 KLRG1Q96E93 195 aa11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 C12orf42Q96LP6 360 aa11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 AK8Q96MA6 479 aa11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 FEZ1Q99689 392 aa11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 SDF4Q9BRK5 362 aa11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 RANBP17Q9H2T7 1088 aaKnown RBP11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 GRPEL1Q9HAV7 217 aa11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 MRPL11Q9Y3B7 192 aaKnown RBP11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 POLR2AP24928 1970 aaKnown RBP11.75□□□□□ -0.53
SNORD88C-201ENST00000408061 PIK3CDO00329 1044 aa11.74□□□□□ -0.53
SNORD88C-201ENST00000408061 SLC26A4O43511 780 aa11.74□□□□□ -0.53
SNORD88C-201ENST00000408061 PFKFB1P16118 471 aa11.74□□□□□ -0.53
SNORD88C-201ENST00000408061 ECE1P42892 770 aa11.74□□□□□ -0.53
SNORD88C-201ENST00000408061 BACE1P56817 501 aa11.74□□□□□ -0.53
SNORD88C-201ENST00000408061 SEMA3FQ13275 785 aa11.74□□□□□ -0.53
SNORD88C-201ENST00000408061 EARS2Q5JPH6 523 aaKnown RBP11.74□□□□□ -0.53
SNORD88C-201ENST00000408061 SHC4Q6S5L8 630 aa11.74□□□□□ -0.53
SNORD88C-201ENST00000408061 SASS6Q6UVJ0 657 aa11.74□□□□□ -0.53
SNORD88C-201ENST00000408061 CDAN1Q8IWY9 1227 aa11.74□□□□□ -0.53
SNORD88C-201ENST00000408061 ZNF280CQ8ND82 737 aa11.74□□□□□ -0.53
SNORD88C-201ENST00000408061 COA7Q96BR5 231 aa11.74□□□□□ -0.53
SNORD88C-201ENST00000408061 CPVLQ9H3G5 476 aa11.74□□□□□ -0.53
SNORD88C-201ENST00000408061 KCNH3Q9ULD8 1083 aa11.74□□□□□ -0.53
SNORD88C-201ENST00000408061 RABGAP1Q9Y3P9 1069 aa11.74□□□□□ -0.53
SNORD88C-201ENST00000408061 A0A1B0GVL5 298 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 ASTN2O75129 1339 aaPredicted RBP11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 ABCB11O95342 1321 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 PTPRAP18433 802 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 EPHX2P34913 555 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 TXLNAP40222 546 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 IREB2P48200 963 aaKnown RBP11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 NDUFA8P51970 172 aa11.73□□□□□ -0.53
SNORD88C-201ENST00000408061 MAP3K9P80192 1104 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms