RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 ANKRD20A4Q4UJ75 823 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 ANKRD20A8PQ5CZ79 823 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 ANKRD20A2Q5SQ80 823 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 ANKRD20A1Q5TYW2 823 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 MAP4K1Q92918 833 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 PARD6BQ9BYG5 372 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 ADCY9O60503 1353 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 DDAH1O94760 285 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 HEXIM1O94992 359 aaKnown RBP14.19□□□□□ -0.14
RNF43-201ENST00000407977 TAF12Q16514 161 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 SDCCAG3Q96C92 435 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 RBM17Q96I25 401 aaKnown RBP14.19□□□□□ -0.14
RNF43-201ENST00000407977 TUBGCP2Q9BSJ2 902 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 FOXP1Q9H334 677 aaPredicted RBP14.19□□□□□ -0.14
RNF43-201ENST00000407977 ANTXR1Q9H6X2 564 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 NRBP1Q9UHY1 535 aa14.19□□□□□ -0.14
RNF43-201ENST00000407977 A0A0D9SFI3 127 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 PDE6CP51160 858 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 SESN3P58005 492 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 SP4Q02446 784 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 EHHADHQ08426 723 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 KCTD16Q68DU8 428 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 RCOR1Q9UKL0 485 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 DAAM1Q9Y4D1 1078 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 COL4A3BPQ9Y5P4 624 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 DMRT2Q9Y5R5 561 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 TERF2Q15554 542 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 C10orf76Q5T2E6 689 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 CDKL2Q92772 493 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 PBKQ96KB5 322 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 PKD2L1Q9P0L9 805 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 PGRMC1O00264 195 aaKnown RBP14.18□□□□□ -0.14
RNF43-201ENST00000407977 PDIA3P30101 505 aaKnown RBP14.18□□□□□ -0.14
RNF43-201ENST00000407977 SERPINB6P35237 376 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 GARSP41250 739 aaKnown RBP14.18□□□□□ -0.14
RNF43-201ENST00000407977 KIF11P52732 1056 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 ESRRGP62508 458 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 FAM26FQ5R3K3 315 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 PPP1R2P3Q6NXS1 205 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 EMBQ6PCB8 327 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 PDZD4Q76G19 769 aaPredicted RBP14.18□□□□□ -0.14
RNF43-201ENST00000407977 NEK8Q86SG6 692 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 ENOX1Q8TC92 643 aaKnown RBP14.18□□□□□ -0.14
RNF43-201ENST00000407977 PANX2Q96RD6 677 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 ZSCAN10Q96SZ4 725 aaPredicted RBP14.18□□□□□ -0.14
RNF43-201ENST00000407977 KDM5DQ9BY66 1539 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 HSPD1P10809 573 aaKnown RBP14.18□□□□□ -0.14
RNF43-201ENST00000407977 TFAP4Q01664 338 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 TCP11Q8WWU5 503 aa14.18□□□□□ -0.14
RNF43-201ENST00000407977 LSG1Q9H089 658 aaKnown RBP14.18□□□□□ -0.14
RNF43-201ENST00000407977 ARHGEF10O15013 1369 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 SCG2P13521 617 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 POLR2BP30876 1174 aaKnown RBP14.17□□□□□ -0.14
RNF43-201ENST00000407977 BPIFB4P59827 614 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 ZNF827Q17R98 1081 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 MMS22LQ6ZRQ5 1243 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 OTUD6AQ7L8S5 288 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 PLEKHA4Q9H4M7 779 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 SOS2Q07890 1332 aaPredicted RBP14.17□□□□□ -0.14
RNF43-201ENST00000407977 TRIM11Q96F44 468 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 USP44Q9H0E7 712 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 PANK4Q9NVE7 773 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 MED23Q9ULK4 1368 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 PPARDQ03181 441 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 EPB41L5Q9HCM4 733 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 C1orf112Q9NSG2 853 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 CTNND1O60716 968 aaKnown RBP14.17□□□□□ -0.14
RNF43-201ENST00000407977 TNNI1P19237 187 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 ZKSCAN8Q15776 578 aaPredicted RBP14.17□□□□□ -0.14
RNF43-201ENST00000407977 NBPF9Q3BBW0 867 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 AK8Q96MA6 479 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 C19orf44Q9H6X5 657 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 EPS15L1Q9UBC2 864 aa14.17□□□□□ -0.14
RNF43-201ENST00000407977 PNMA6AP0CW24 399 aaPredicted RBP14.16□□□□□ -0.14
RNF43-201ENST00000407977 GUCY2CP25092 1073 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 BFSP1Q12934 665 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 ADAM9Q13443 819 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 CASP8Q14790 479 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 EXOC3L4Q17RC7 722 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 CNOT6LQ96LI5 555 aaKnown RBP14.16□□□□□ -0.14
RNF43-201ENST00000407977 PCDHA12Q9UN75 941 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 TTC4O95801 387 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 NNTQ13423 1086 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 VSTM4Q8IW00 320 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 NCAPGQ9BPX3 1015 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 AATFQ9NY61 560 aaKnown RBP eCLIP14.16□□□□□ -0.14
RNF43-201ENST00000407977 CLIC4Q9Y696 253 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 PPP2R5DQ14738 602 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 MAGOHBQ96A72 148 aaKnown RBP14.16□□□□□ -0.14
RNF43-201ENST00000407977 ZNF518AQ6AHZ1 1483 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 BTBD18B2RXH4 712 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 ADD1P35611 737 aaKnown RBP14.16□□□□□ -0.14
RNF43-201ENST00000407977 TBC1D22AQ8WUA7 517 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 SYMPKQ92797 1274 aaKnown RBP14.16□□□□□ -0.14
RNF43-201ENST00000407977 ZNF594Q96JF6 807 aaPredicted RBP14.16□□□□□ -0.14
RNF43-201ENST00000407977 SLC52A2Q9HAB3 445 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 KDRP35968 1356 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 SYCP2Q9BX26 1530 aa14.16□□□□□ -0.14
RNF43-201ENST00000407977 RPSAP08865 295 aaKnown RBP14.16□□□□□ -0.14
RNF43-201ENST00000407977 RASSF7Q02833 373 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms