RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 OR52Z1P0C646 297 aa18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 CD44P16070 742 aaKnown RBP18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 CDK11BP21127 795 aaKnown RBP18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 SPATA1Q5VX52 437 aa18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 SUPT20HQ8NEM7 779 aa18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 AK8Q96MA6 479 aa18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 MTRQ99707 1265 aa18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 GPCPD1Q9NPB8 672 aa18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 INTS13Q9NVM9 706 aa18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 ZNF219Q9P2Y4 722 aaPredicted RBP18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 PPP1R3GB7ZBB8 358 aa18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 ADCY7P51828 1080 aa18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 KARSQ15046 597 aaKnown RBP18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 LETM2Q2VYF4 491 aa18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 ZFPM1Q8IX07 1006 aa18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 STAMQ92783 540 aa18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 C16orf45Q96MC5 204 aaPredicted RBP18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 DNAJC18Q9H819 358 aa18.77■□□□□ 0.6
PIKFYVE-204ENST00000407449 TMEM232C9JQI7 657 aa18.76■□□□□ 0.59
PIKFYVE-204ENST00000407449 CCNT1O60563 726 aaKnown RBP18.76■□□□□ 0.59
PIKFYVE-204ENST00000407449 UBA7P41226 1012 aa18.76■□□□□ 0.59
PIKFYVE-204ENST00000407449 RBM5P52756 815 aaKnown RBP eCLIP18.76■□□□□ 0.59
PIKFYVE-204ENST00000407449 AOC3Q16853 763 aa18.76■□□□□ 0.59
PIKFYVE-204ENST00000407449 BLZF1Q9H2G9 400 aa18.76■□□□□ 0.59
PIKFYVE-204ENST00000407449 FAM198AQ9UFP1 575 aa18.76■□□□□ 0.59
PIKFYVE-204ENST00000407449 ARFGEF1Q9Y6D6 1849 aa18.76■□□□□ 0.59
PIKFYVE-204ENST00000407449 PNMA6FA0A0J9YX94 578 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 MYL1P05976 194 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 GTF2F1P35269 517 aaKnown RBP eCLIP18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 EZH2Q15910 746 aaKnown RBP18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 RRAGBQ5VZM2 374 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 CCAR2Q8N163 923 aaKnown RBP18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 CCDC112Q8NEF3 446 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 TBCKQ8TEA7 893 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 CAMKK2Q96RR4 588 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 JMJD4Q9H9V9 463 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 MAGEF1Q9HAY2 307 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 SAMSN1Q9NSI8 373 aaKnown RBP18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 PI4KBQ9UBF8 816 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 PCDHAC2Q9Y5I4 1007 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 RPN1P04843 607 aaKnown RBP18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 TNNT1P13805 278 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 CDC25AP30304 524 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 CACNB3P54284 484 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 CCDC96Q2M329 555 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 HSP90AA4PQ58FG1 418 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 JAKMIP3Q5VZ66 844 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 KLHL10Q6JEL2 608 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 ADGRF4Q8IZF3 695 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 RASSF8Q8NHQ8 419 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 COA7Q96BR5 231 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 CUEDC2Q9H467 287 aa18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 BIN2Q9UBW5 565 aaPredicted RBP18.75■□□□□ 0.59
PIKFYVE-204ENST00000407449 COL2A1P02458 1487 aaPredicted RBP18.74■□□□□ 0.59
PIKFYVE-204ENST00000407449 PP2D1A8MPX8 630 aa18.74■□□□□ 0.59
PIKFYVE-204ENST00000407449 SEMA3FQ13275 785 aa18.74■□□□□ 0.59
PIKFYVE-204ENST00000407449 NAALADL2Q58DX5 795 aa18.74■□□□□ 0.59
PIKFYVE-204ENST00000407449 ZNF658Q5TYW1 1059 aaPredicted RBP18.74■□□□□ 0.59
PIKFYVE-204ENST00000407449 CDKAL1Q5VV42 579 aa18.74■□□□□ 0.59
PIKFYVE-204ENST00000407449 SMYD4Q8IYR2 804 aaPredicted RBP18.74■□□□□ 0.59
PIKFYVE-204ENST00000407449 TRIM34Q9BYJ4 488 aa18.74■□□□□ 0.59
PIKFYVE-204ENST00000407449 TMEM260Q9NX78 707 aa18.74■□□□□ 0.59
PIKFYVE-204ENST00000407449 DDTLA6NHG4 134 aaPredicted RBP18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 USP27XA6NNY8 438 aa18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 ATP2B2Q01814 1243 aa18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 TCP10Q12799 353 aa18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 TBX2Q13207 712 aaPredicted RBP18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 NYAP1Q6ZVC0 841 aa18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 MKL1Q969V6 931 aa18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 MTMR8Q96EF0 704 aa18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 RIC8AQ9NPQ8 531 aa18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 NYAP2Q9P242 653 aa18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 CTNND2Q9UQB3 1225 aa18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 A0A1B0GTH6 734 aa18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 PSDA5PKW4 1024 aaPredicted RBP18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 CERKLQ49MI3 558 aaPredicted RBP18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 TATDN1Q6P1N9 297 aa18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 SH3BP5LQ7L8J4 393 aa18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 CABP7Q86V35 215 aa18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 DCAF4Q8WV16 495 aa18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 RWDD2AQ9UIY3 292 aa18.73■□□□□ 0.59
PIKFYVE-204ENST00000407449 ATRNL1Q5VV63 1379 aa18.72■□□□□ 0.59
PIKFYVE-204ENST00000407449 STX17P56962 302 aa18.72■□□□□ 0.59
PIKFYVE-204ENST00000407449 EN1Q05925 392 aaPredicted RBP18.72■□□□□ 0.59
PIKFYVE-204ENST00000407449 KCNB1Q14721 858 aa18.72■□□□□ 0.59
PIKFYVE-204ENST00000407449 GRIPAP1Q4V328 841 aa18.72■□□□□ 0.59
PIKFYVE-204ENST00000407449 SPECC1LQ69YQ0 1117 aa18.72■□□□□ 0.59
PIKFYVE-204ENST00000407449 TTBK2Q6IQ55 1244 aa18.72■□□□□ 0.59
PIKFYVE-204ENST00000407449 ZSCAN29Q8IWY8 852 aaPredicted RBP18.72■□□□□ 0.59
PIKFYVE-204ENST00000407449 KANSL2Q9H9L4 492 aa18.72■□□□□ 0.59
PIKFYVE-204ENST00000407449 KBTBD4Q9NVX7 518 aa18.72■□□□□ 0.59
PIKFYVE-204ENST00000407449 ZBTB5O15062 677 aa18.71■□□□□ 0.59
PIKFYVE-204ENST00000407449 PPIP5K2O43314 1243 aa18.71■□□□□ 0.59
PIKFYVE-204ENST00000407449 ENTPD3O75355 529 aa18.71■□□□□ 0.59
PIKFYVE-204ENST00000407449 NR1I3Q14994 352 aa18.71■□□□□ 0.59
PIKFYVE-204ENST00000407449 PTPN14Q15678 1187 aa18.71■□□□□ 0.59
PIKFYVE-204ENST00000407449 APTXQ7Z2E3 356 aaKnown RBP18.71■□□□□ 0.59
PIKFYVE-204ENST00000407449 CTAGE1Q96RT6 745 aa18.71■□□□□ 0.59
PIKFYVE-204ENST00000407449 TMX1Q9H3N1 280 aa18.71■□□□□ 0.59
PIKFYVE-204ENST00000407449 PAXBP1Q9Y5B6 917 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms