RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 RNF112Q9ULX5 631 aa6.52□□□□□ -1.37
HMGB3P18-201ENST00000406327 AQP7O14520 342 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 SCG5P05408 212 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 GSNP06396 782 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 ADGRE1Q14246 886 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 CNNM4Q6P4Q7 775 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 SEZ6L2Q6UXD5 910 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 C22orf34Q6ZV56 151 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 NOL8Q76FK4 1167 aaKnown RBP6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 RNF180Q86T96 592 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 DZIP1LQ8IYY4 767 aaKnown RBP6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 GSTCDQ8NEC7 633 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 PIWIL2Q8TC59 973 aaKnown RBP6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 BRF1Q92994 677 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 ZDHHC15Q96MV8 337 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 UBL7Q96S82 380 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 DUSP23Q9BVJ7 150 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 KCNF1Q9H3M0 494 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 LGR6Q9HBX8 967 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 CHST7Q9NS84 486 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 GFOD1Q9NXC2 390 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 KLHL42Q9P2K6 505 aa6.51□□□□□ -1.37
HMGB3P18-201ENST00000406327 TBX1O43435 398 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 DYRK3O43781 588 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 DLX3O60479 287 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 EOMESO95936 686 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 IGFALSP35858 605 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 GRIA2P42262 883 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 NOP2P46087 812 aaKnown RBP6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 EXOSC10Q01780 885 aaKnown RBP6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 NMIQ13287 307 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 CDK5R2Q13319 367 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 MBTPS1Q14703 1052 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 NFKBIBQ15653 356 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 CYP27C1Q4G0S4 372 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 HSP90AB2PQ58FF8 381 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 DDX46Q7L014 1031 aaKnown RBP6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 TXNRD3Q86VQ6 643 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 DTWD2Q8NBA8 298 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 ATL2Q8NHH9 583 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 RIN3Q8TB24 985 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 DDX1Q92499 740 aaKnown RBP6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 MAGEB10Q96LZ2 347 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 CLUHP3Q96NS8 147 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 TARS2Q9BW92 718 aaKnown RBP6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 TPSG1Q9NRR2 321 aa6.5□□□□□ -1.37
HMGB3P18-201ENST00000406327 IGF2BP3O00425 579 aaKnown RBP eCLIP6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 OPA1O60313 960 aa6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 C6orf222P0C671 652 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 POU3F2P20265 443 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 CYP27A1Q02318 531 aa6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 CLEC16AQ2KHT3 1053 aa6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 BEND4Q6ZU67 534 aa6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 UBE2R2Q712K3 238 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 BRAPQ7Z569 592 aa6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 CLEC10AQ8IUN9 316 aa6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 DCAF4Q8WV16 495 aa6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 ZFYVE21Q9BQ24 234 aa6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 LGR4Q9BXB1 951 aa6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 SLC52A2Q9HAB3 445 aa6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 TRIM39Q9HCM9 518 aa6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 C1GALT1Q9NS00 363 aa6.49□□□□□ -1.37
HMGB3P18-201ENST00000406327 GNAT3A8MTJ3 354 aa6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 DYNC1LI2O43237 492 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 DNAJC8O75937 253 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 FAM87AP0C7U9 286 aa6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 ENDOUP21128 410 aaKnown RBP6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 NEK4P51957 841 aa6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 ODR4Q5SWX8 454 aa6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 SLC35F1Q5T1Q4 408 aa6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 RSPO2Q6UXX9 243 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 ANKLE2Q86XL3 938 aa6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 DDX42Q86XP3 938 aaKnown RBP eCLIP6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 AFAP1L2Q8N4X5 818 aa6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 ZNF655Q8N720 491 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 TMEM145Q8NBT3 493 aa6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 STAG1Q8WVM7 1258 aa6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 TRIT1Q9H3H1 467 aaKnown RBP6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 GPR55Q9Y2T6 319 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P18-201ENST00000406327 TRBV23OR9-2A0A075B6M9 112 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 BRINP1O60477 761 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 PRAMEF1O95521 474 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 ZNF865P0CJ78 1059 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 SDSP20132 328 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 ECI1P42126 302 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 SNW1Q13573 536 aaKnown RBP6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 DHCR24Q15392 516 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 PRSS36Q5K4E3 855 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 ACBD5Q5T8D3 534 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 STYK1Q6J9G0 422 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 OGFOD3Q6PK18 319 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 USP53Q70EK8 1073 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 KSR1Q8IVT5 923 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 ARMC10Q8N2F6 343 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 MFSD4AQ8N468 514 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 DAGLBQ8NCG7 672 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 SLC7A14Q8TBB6 771 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 CCDC136Q96JN2 1154 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 FAM83CQ9BQN1 747 aa6.47□□□□□ -1.37
HMGB3P18-201ENST00000406327 ST14Q9Y5Y6 855 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms