RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 SLFN13Q68D06 897 aa16.02■□□□□ 0.16
PRAME-205ENST00000405655 PLA2G4DQ86XP0 818 aa16.02■□□□□ 0.16
PRAME-205ENST00000405655 TRMT44Q8IYL2 757 aaKnown RBP16.02■□□□□ 0.16
PRAME-205ENST00000405655 CEP57L1Q8IYX8 460 aa16.02■□□□□ 0.16
PRAME-205ENST00000405655 TBCKQ8TEA7 893 aa16.02■□□□□ 0.16
PRAME-205ENST00000405655 MTRQ99707 1265 aa16.02■□□□□ 0.16
PRAME-205ENST00000405655 GLIS2Q9BZE0 524 aaPredicted RBP16.02■□□□□ 0.16
PRAME-205ENST00000405655 HSD3B7Q9H2F3 369 aa16.02■□□□□ 0.16
PRAME-205ENST00000405655 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.02■□□□□ 0.16
PRAME-205ENST00000405655 CCDC39Q9UFE4 941 aa16.02■□□□□ 0.16
PRAME-205ENST00000405655 FZD1Q9UP38 647 aa16.02■□□□□ 0.16
PRAME-205ENST00000405655 FER1L6Q2WGJ9 1857 aa16.02■□□□□ 0.16
PRAME-205ENST00000405655 MYH7BA7E2Y1 1941 aa16.02■□□□□ 0.16
PRAME-205ENST00000405655 LMOD1P29536 600 aaPredicted RBP16.02■□□□□ 0.15
PRAME-205ENST00000405655 LRMPQ12912 555 aa16.02■□□□□ 0.15
PRAME-205ENST00000405655 DGKZQ13574 1117 aa16.02■□□□□ 0.15
PRAME-205ENST00000405655 ASPRV1Q53RT3 343 aa16.02■□□□□ 0.15
PRAME-205ENST00000405655 DRC7Q8IY82 874 aa16.02■□□□□ 0.15
PRAME-205ENST00000405655 ZNF579Q8NAF0 562 aaKnown RBP16.02■□□□□ 0.15
PRAME-205ENST00000405655 F5H6K3 240 aa16.01■□□□□ 0.15
PRAME-205ENST00000405655 KLRC3Q07444 240 aa16.01■□□□□ 0.15
PRAME-205ENST00000405655 SAMD7Q7Z3H4 446 aa16.01■□□□□ 0.15
PRAME-205ENST00000405655 OGFOD1Q8N543 542 aa16.01■□□□□ 0.15
PRAME-205ENST00000405655 CCDC148Q8NFR7 591 aa16.01■□□□□ 0.15
PRAME-205ENST00000405655 PAGE5Q96GU1 130 aa16.01■□□□□ 0.15
PRAME-205ENST00000405655 MED15Q96RN5 788 aa16.01■□□□□ 0.15
PRAME-205ENST00000405655 ZKSCAN5Q9Y2L8 839 aa16.01■□□□□ 0.15
PRAME-205ENST00000405655 USP17L15C9J2P7 530 aa16■□□□□ 0.15
PRAME-205ENST00000405655 USP17L13C9JLJ4 530 aa16■□□□□ 0.15
PRAME-205ENST00000405655 USP17L11C9JVI0 530 aa16■□□□□ 0.15
PRAME-205ENST00000405655 USP17L18D6R9N7 530 aa16■□□□□ 0.15
PRAME-205ENST00000405655 USP17L22D6RA61 530 aa16■□□□□ 0.15
PRAME-205ENST00000405655 USP17L17D6RBQ6 530 aa16■□□□□ 0.15
PRAME-205ENST00000405655 USP17L19D6RCP7 530 aa16■□□□□ 0.15
PRAME-205ENST00000405655 USP17L20D6RJB6 530 aa16■□□□□ 0.15
PRAME-205ENST00000405655 SLC1A4P43007 532 aa16■□□□□ 0.15
PRAME-205ENST00000405655 FMR1Q06787 632 aaKnown RBP eCLIP16■□□□□ 0.156e-14■□□□□ 9.2
PRAME-205ENST00000405655 USP17L24Q0WX57 530 aa16■□□□□ 0.15
PRAME-205ENST00000405655 USP17L6PQ6QN14 398 aa16■□□□□ 0.15
PRAME-205ENST00000405655 POTEDQ86YR6 584 aa16■□□□□ 0.15
PRAME-205ENST00000405655 DAGLBQ8NCG7 672 aa16■□□□□ 0.15
PRAME-205ENST00000405655 MTFR1LQ9H019 292 aa16■□□□□ 0.15
PRAME-205ENST00000405655 WNT10BO00744 389 aa16■□□□□ 0.15
PRAME-205ENST00000405655 TDP2O95551 362 aa16■□□□□ 0.15
PRAME-205ENST00000405655 NDUFB10O96000 172 aa16■□□□□ 0.15
PRAME-205ENST00000405655 POLD1P28340 1107 aa16■□□□□ 0.15
PRAME-205ENST00000405655 SPDYE2Q495Y8 402 aa16■□□□□ 0.15
PRAME-205ENST00000405655 SOGA3Q5TF21 947 aa16■□□□□ 0.15
PRAME-205ENST00000405655 CCDC186Q7Z3E2 898 aa16■□□□□ 0.15
PRAME-205ENST00000405655 P2RX7Q99572 595 aaKnown RBP16■□□□□ 0.15
PRAME-205ENST00000405655 TAOK3Q9H2K8 898 aa16■□□□□ 0.15
PRAME-205ENST00000405655 C6orf50Q9HD87 102 aa16■□□□□ 0.15
PRAME-205ENST00000405655 PYCARDQ9ULZ3 195 aa16■□□□□ 0.15
PRAME-205ENST00000405655 GJA3Q9Y6H8 435 aa16■□□□□ 0.15
PRAME-205ENST00000405655 ARFGEF1Q9Y6D6 1849 aa16■□□□□ 0.15
PRAME-205ENST00000405655 MYO3BQ8WXR4 1341 aa15.99■□□□□ 0.15
PRAME-205ENST00000405655 SLC37A4O43826 429 aa15.99■□□□□ 0.15
PRAME-205ENST00000405655 ENTPD3O75355 529 aa15.99■□□□□ 0.15
PRAME-205ENST00000405655 QRICH1Q2TAL8 776 aa15.99■□□□□ 0.15
PRAME-205ENST00000405655 USH1GQ495M9 461 aa15.99■□□□□ 0.15
PRAME-205ENST00000405655 PRAMEF18Q5VWM3 479 aa15.99■□□□□ 0.15
PRAME-205ENST00000405655 REXO1Q8N1G1 1221 aaKnown RBP15.99■□□□□ 0.15
PRAME-205ENST00000405655 DPF2Q92785 391 aa15.99■□□□□ 0.15
PRAME-205ENST00000405655 FERMT2Q96AC1 680 aa15.99■□□□□ 0.15
PRAME-205ENST00000405655 CCDC17Q96LX7 622 aa15.99■□□□□ 0.15
PRAME-205ENST00000405655 KANSL2Q9H9L4 492 aa15.99■□□□□ 0.15
PRAME-205ENST00000405655 ATRNL1Q5VV63 1379 aa15.99■□□□□ 0.15
PRAME-205ENST00000405655 CD44P16070 742 aaKnown RBP15.99■□□□□ 0.15
PRAME-205ENST00000405655 MSNP26038 577 aaKnown RBP15.99■□□□□ 0.15
PRAME-205ENST00000405655 TNNI2P48788 182 aa15.99■□□□□ 0.15
PRAME-205ENST00000405655 TGFB2P61812 414 aa15.99■□□□□ 0.15
PRAME-205ENST00000405655 E2F4Q16254 413 aa15.99■□□□□ 0.15
PRAME-205ENST00000405655 PNMA6FA0A0J9YX94 578 aa15.98■□□□□ 0.15
PRAME-205ENST00000405655 TMEM232C9JQI7 657 aa15.98■□□□□ 0.15
PRAME-205ENST00000405655 CLCN1P35523 988 aa15.98■□□□□ 0.15
PRAME-205ENST00000405655 NT5C2P49902 561 aa15.98■□□□□ 0.15
PRAME-205ENST00000405655 IKQ13123 557 aaPredicted RBP15.98■□□□□ 0.15
PRAME-205ENST00000405655 CUL4BQ13620 913 aa15.98■□□□□ 0.15
PRAME-205ENST00000405655 NONOQ15233 471 aaKnown RBP eCLIP15.98■□□□□ 0.15
PRAME-205ENST00000405655 TBC1D10BQ4KMP7 808 aaPredicted RBP15.98■□□□□ 0.15
PRAME-205ENST00000405655 CIAPIN1Q6FI81 312 aa15.98■□□□□ 0.15
PRAME-205ENST00000405655 TMEM179Q6ZVK1 233 aa15.98■□□□□ 0.15
PRAME-205ENST00000405655 SGIP1Q9BQI5 828 aa15.98■□□□□ 0.15
PRAME-205ENST00000405655 TECP42680 631 aa15.97■□□□□ 0.15
PRAME-205ENST00000405655 PTGER2P43116 358 aa15.97■□□□□ 0.15
PRAME-205ENST00000405655 TRAPPC10P48553 1259 aa15.97■□□□□ 0.15
PRAME-205ENST00000405655 SARSP49591 514 aaKnown RBP15.97■□□□□ 0.15
PRAME-205ENST00000405655 ADCY7P51828 1080 aa15.97■□□□□ 0.15
PRAME-205ENST00000405655 STX17P56962 302 aa15.97■□□□□ 0.15
PRAME-205ENST00000405655 MYOZ2Q9NPC6 264 aa15.97■□□□□ 0.15
PRAME-205ENST00000405655 TMOD2Q9NZR1 351 aa15.97■□□□□ 0.15
PRAME-205ENST00000405655 NYAP2Q9P242 653 aa15.97■□□□□ 0.15
PRAME-205ENST00000405655 HDAC9Q9UKV0 1011 aa15.97■□□□□ 0.15
PRAME-205ENST00000405655 SLFN14P0C7P3 912 aa15.97■□□□□ 0.15
PRAME-205ENST00000405655 DPYDQ12882 1025 aa15.97■□□□□ 0.15
PRAME-205ENST00000405655 CDC37Q16543 378 aaPredicted RBP15.97■□□□□ 0.15
PRAME-205ENST00000405655 KLHL10Q6JEL2 608 aa15.97■□□□□ 0.15
PRAME-205ENST00000405655 PDXDC2PQ6P474 469 aa15.97■□□□□ 0.15
PRAME-205ENST00000405655 FAM151AQ8WW52 585 aa15.97■□□□□ 0.15
PRAME-205ENST00000405655 SMARCE1Q969G3 411 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms