RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 MICALL2Q8IY33 904 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 MYCT1Q8N699 235 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 LINC00116Q8NCU8 138 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 LUC7L2Q9Y383 392 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 USP17L10C9JJH3 530 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 MIS18BP1Q6P0N0 1132 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 DCAF4Q8WV16 495 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 PCDHB13Q9Y5F0 798 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 ADCY9O60503 1353 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 TRAF5O00463 557 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 ELF2Q15723 593 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 KRT40Q6A162 431 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 NEK8Q86SG6 692 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 ZBTB9Q96C00 473 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 STAP2Q9UGK3 403 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 AKR1B15C9JRZ8 316 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 TTC31Q49AM3 519 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 EP400NLQ6ZTU2 488 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 TPH2Q8IWU9 490 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 SPICE1Q8N0Z3 855 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 GOLGA5Q8TBA6 731 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 NOC4LQ9BVI4 516 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 WDR11Q9BZH6 1224 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 TDRD3Q9H7E2 651 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 CD2APQ9Y5K6 639 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 POLR2DO15514 142 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 POLA2Q14181 598 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 DIXDC1Q155Q3 683 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 PRR16Q569H4 304 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 NBPF11Q86T75 865 aa13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 EDC3Q96F86 508 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 MTIF3Q9H2K0 278 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 USP42Q9H9J4 1324 aaKnown RBP13.03□□□□□ -0.32
RAPGEF3-204ENST00000405493 STAMBPO95630 424 aa13.02□□□□□ -0.32
RAPGEF3-204ENST00000405493 GCFC2P16383 781 aaKnown RBP13.02□□□□□ -0.32
RAPGEF3-204ENST00000405493 HSPA4P34932 840 aa13.02□□□□□ -0.32
RAPGEF3-204ENST00000405493 RASGRF1Q13972 1273 aa13.02□□□□□ -0.32
RAPGEF3-204ENST00000405493 XKR9Q5GH70 373 aa13.02□□□□□ -0.32
RAPGEF3-204ENST00000405493 GIMAP8Q8ND71 665 aaPredicted RBP13.02□□□□□ -0.32
RAPGEF3-204ENST00000405493 BAG1Q99933 345 aaPredicted RBP13.02□□□□□ -0.32
RAPGEF3-204ENST00000405493 JAK2O60674 1132 aa13.02□□□□□ -0.32
RAPGEF3-204ENST00000405493 UBXN2AP68543 259 aa13.02□□□□□ -0.32
RAPGEF3-204ENST00000405493 ZFYVE28Q9HCC9 887 aa13.02□□□□□ -0.32
RAPGEF3-204ENST00000405493 MAPK8IP1Q9UQF2 711 aa13.02□□□□□ -0.32
RAPGEF3-204ENST00000405493 PREX1Q8TCU6 1659 aa13.02□□□□□ -0.32
RAPGEF3-204ENST00000405493 TSNARE1Q96NA8 513 aa13.02□□□□□ -0.33
RAPGEF3-204ENST00000405493 RPS6KC1Q96S38 1066 aa13.02□□□□□ -0.33
RAPGEF3-204ENST00000405493 PSMD1Q99460 953 aa13.02□□□□□ -0.33
RAPGEF3-204ENST00000405493 FEM1BQ9UK73 627 aa13.02□□□□□ -0.33
RAPGEF3-204ENST00000405493 PRPF6O94906 941 aaKnown RBP13.02□□□□□ -0.33
RAPGEF3-204ENST00000405493 DYNLL1P63167 89 aaKnown RBP13.02□□□□□ -0.33
RAPGEF3-204ENST00000405493 VWA3BQ502W6 1294 aa13.02□□□□□ -0.33
RAPGEF3-204ENST00000405493 HERC4Q5GLZ8 1057 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF3-204ENST00000405493 RNF169Q8NCN4 708 aa13.02□□□□□ -0.33
RAPGEF3-204ENST00000405493 GPT2Q8TD30 523 aa13.02□□□□□ -0.33
RAPGEF3-204ENST00000405493 PAIP2Q9BPZ3 127 aaKnown RBP13.02□□□□□ -0.33
RAPGEF3-204ENST00000405493 VPS16Q9H269 839 aa13.02□□□□□ -0.33
RAPGEF3-204ENST00000405493 CAMTA2O94983 1202 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 GSPT1P15170 499 aaKnown RBP13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 ZSCAN20P17040 1043 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 CNGA4Q8IV77 575 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 MICALL1Q8N3F8 863 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 LEO1Q8WVC0 666 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 PCDHA12Q9UN75 941 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 KCNJ14Q9UNX9 436 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 ZMYM6O95789 1325 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 EBAG9O00559 213 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 ZNF157P51786 506 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 SPECC1LQ69YQ0 1117 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 KRBA2Q6ZNG9 492 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 CABP7Q86V35 215 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 PLA2G12BQ9BX93 195 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 LARSQ9P2J5 1176 aaKnown RBP13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 RHOXF2BP0C7M4 288 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 POLGP54098 1239 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 HDXQ7Z353 690 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 RHOXF2Q9BQY4 288 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 SYNRGQ9UMZ2 1314 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 QRICH2Q9H0J4 1663 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 PPP1R14CQ8TAE6 165 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 RAET1EQ8TD07 263 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 SLF1Q9BQI6 1058 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 hCG_1642624A0A1W2PR95 340 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 TBC1D16Q8TBP0 767 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 TSGA10Q9BZW7 698 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 MROH7-TTC4A0A0A0MT08 1334 aa13.01□□□□□ -0.33
RAPGEF3-204ENST00000405493 OPA1O60313 960 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 ATP2C2O75185 946 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 ZNF34Q8IZ26 560 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 AGBL3Q8NEM8 1001 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 UIMC1Q96RL1 719 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 PARK7Q99497 189 aaKnown RBP13□□□□□ -0.33
RAPGEF3-204ENST00000405493 CDK8P49336 464 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 IGSF22Q8N9C0 903 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 SLC7A3Q8WY07 619 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 RNF34Q969K3 372 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 PPP2R3AQ06190 1150 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 SUGCTQ9HAC7 445 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 A0A0D9SFI3 127 aa13□□□□□ -0.33
RAPGEF3-204ENST00000405493 GH2P01242 217 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms