RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 GNG11P61952 73 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 EHHADHQ08426 723 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 CRY2Q49AN0 593 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 FAM47AQ5JRC9 791 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 BEND6Q5SZJ8 279 aaPredicted RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 PAPD7Q5XG87 772 aaKnown RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 WDR93Q6P2C0 686 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 CYP26C1Q6V0L0 522 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 TRAPPC11Q7Z392 1133 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 POTEDQ86YR6 584 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 SMYD4Q8IYR2 804 aaPredicted RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 STAG2Q8N3U4 1231 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 MB21D1Q8N884 522 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 CEP112Q8N8E3 955 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 GOLGA1Q92805 767 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 DHTKD1Q96HY7 919 aaPredicted RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 TMEM60Q9H2L4 133 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 COL11A2P13942 1736 aaPredicted RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 GAKO14976 1311 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 GPR75-ASB3A0A0A6YYF3 556 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 ABL1P00519 1130 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 RASA1P20936 1047 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 WHAMMP3Q1A5X7 153 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 MIIPQ5JXC2 388 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 TAF3Q5VWG9 929 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 AMIGO3Q86WK7 504 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 WDR66Q8TBY9 1149 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 MTMR9Q96QG7 549 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 DESI2Q9BSY9 194 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 MMTAG2Q9BU76 263 aaKnown RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 IRX2Q9BZI1 471 aaPredicted RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 ST7Q9NRC1 585 aa4.36□□□□□ -1.71
RTN4-209ENST00000405240 ARGLU1Q9NWB6 273 aaPredicted RBP4.36□□□□□ -1.71
RTN4-209ENST00000405240 KLRG2A4D1S0 409 aaPredicted RBP4.35□□□□□ -1.71
RTN4-209ENST00000405240 POTEB2H3BUK9 544 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 hCG_1984214I3L0E3 225 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 PARP1P09874 1014 aaKnown RBP4.35□□□□□ -1.71
RTN4-209ENST00000405240 USP17L8P0C7I0 530 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 SNHG28P0DPA3 235 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 NLRP5P59047 1200 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 HERVK_113P62684 666 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 FILIP1LQ4L180 1135 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 RRAGBQ5VZM2 374 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 TMCO3Q6UWJ1 677 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 PPFIBP1Q86W92 1011 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 ZNF713Q8N859 430 aaPredicted RBP4.35□□□□□ -1.71
RTN4-209ENST00000405240 RETREG2Q8NC44 543 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 PNMA1Q8ND90 353 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 SH3RF3Q8TEJ3 882 aaPredicted RBP4.35□□□□□ -1.71
RTN4-209ENST00000405240 ARID3AQ99856 593 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 RIOX1Q9H6W3 641 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 TOMM22Q9NS69 142 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 MCM7P33993 719 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 PPP1R2P41236 205 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 STX17P56962 302 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 GSTO1P78417 241 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 TFAP4Q01664 338 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 GRAPQ13588 217 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 GRIK5Q16478 980 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 HSP90AA4PQ58FG1 418 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 ARHGAP27Q6ZUM4 889 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 MNS1Q8NEH6 495 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 CCDC148Q8NFR7 591 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 NEDD1Q8NHV4 660 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 GRAPLQ8TC17 118 aaPredicted RBP4.35□□□□□ -1.71
RTN4-209ENST00000405240 IQCDQ96DY2 449 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 NLRP3Q96P20 1036 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 ERGIC2Q96RQ1 377 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 TMEM47Q9BQJ4 181 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 BLZF1Q9H2G9 400 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 PODXL2Q9NZ53 605 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 L1RE1Q9UN81 338 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 GDAQ9Y2T3 454 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 BAZ2BQ9UIF8 2168 aaKnown RBP4.35□□□□□ -1.71
RTN4-209ENST00000405240 RGPD3A6NKT7 1758 aaPredicted RBP4.35□□□□□ -1.71
RTN4-209ENST00000405240 RGPD4Q7Z3J3 1758 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 TUBBP07437 444 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 CLK2P49760 499 aaKnown RBP4.35□□□□□ -1.71
RTN4-209ENST00000405240 FXR2P51116 673 aaKnown RBP eCLIP4.35□□□□□ -1.712e-7■□□□□ 9.1
RTN4-209ENST00000405240 RHBDL3P58872 404 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 ZC3H3Q8IXZ2 948 aaKnown RBP4.35□□□□□ -1.71
RTN4-209ENST00000405240 FNBP4Q8N3X1 1017 aaPredicted RBP4.35□□□□□ -1.71
RTN4-209ENST00000405240 PNKPQ96T60 521 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 KAT14Q9H8E8 782 aa4.35□□□□□ -1.71
RTN4-209ENST00000405240 MYO3BQ8WXR4 1341 aa4.34□□□□□ -1.71
RTN4-209ENST00000405240 ZC3H4Q9UPT8 1303 aaKnown RBP4.34□□□□□ -1.71
RTN4-209ENST00000405240 LOXHD1Q8IVV2 1947 aa4.34□□□□□ -1.71
RTN4-209ENST00000405240 TTC26A0AVF1 554 aa4.34□□□□□ -1.71
RTN4-209ENST00000405240 SLC26A4O43511 780 aa4.34□□□□□ -1.71
RTN4-209ENST00000405240 RPS6KA5O75582 802 aa4.34□□□□□ -1.71
RTN4-209ENST00000405240 SEC31AO94979 1220 aaKnown RBP4.34□□□□□ -1.71
RTN4-209ENST00000405240 NDUFA10O95299 355 aa4.34□□□□□ -1.71
RTN4-209ENST00000405240 CHMP4BP1P59074 171 aa4.34□□□□□ -1.71
RTN4-209ENST00000405240 ITIH3Q06033 890 aa4.34□□□□□ -1.71
RTN4-209ENST00000405240 GABPAQ06546 454 aa4.34□□□□□ -1.71
RTN4-209ENST00000405240 KARSQ15046 597 aaKnown RBP4.34□□□□□ -1.71
RTN4-209ENST00000405240 HYIQ5T013 277 aa4.34□□□□□ -1.71
RTN4-209ENST00000405240 CENPPQ6IPU0 288 aa4.34□□□□□ -1.71
RTN4-209ENST00000405240 DTHD1Q6ZMT9 781 aa4.34□□□□□ -1.71
RTN4-209ENST00000405240 PTF1AQ7RTS3 328 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms